Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917617|Adiantum capillus-veneris mRNA, clone: YMU001_000103_C03. (511 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from tra... 39 1e-06 sp|P10401|POLY_DROME Retrovirus-related Pol polyprotein from tra... 38 7e-04 sp|P92523|M860_ARATH Uncharacterized mitochondrial protein AtMg0... 38 0.031 sp|P21414|POL_GALV Pol polyprotein OS=Gibbon ape leukemia virus ... 33 1.0 sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from tra... 32 1.3 sp|P03355|POL_MLVMO Pol polyprotein OS=Moloney murine leukemia v... 32 1.7 sp|P26808|POL_MLVFP Pol polyprotein OS=Friend murine leukemia vi... 32 1.7 sp|P26809|POL_MLVFF Pol polyprotein OS=Friend murine leukemia vi... 32 1.7 sp|P03356|POL_MLVAV Pol polyprotein OS=AKV murine leukemia virus... 32 1.7 sp|P10394|POL4_DROME Retrovirus-related Pol polyprotein from tra... 32 1.7 sp|Q9TTC1|POL_KORV Pro-Pol polyprotein OS=Koala retrovirus GN=pr... 32 2.2 sp|P11227|POL_MLVRD Pol polyprotein OS=Radiation murine leukemia... 31 2.9 sp|P10272|POL_BAEVM Pol polyprotein OS=Baboon endogenous virus (... 31 2.9 sp|P31792|POL_FENV1 Pol polyprotein (Fragment) OS=Feline endogen... 31 3.8 sp|P26810|POL_MLVF5 Pol polyprotein OS=Friend murine leukemia vi... 30 5.0 sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa prot... 30 8.5 sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa prot... 30 8.5 sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa prot... 30 8.5
>sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster GN=pol PE=4 SV=1 Length = 1058
Score = 38.5 bits (88), Expect(2) = 1e-06 Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 3/87 (3%) Frame = -2
Query: 390 DVRSFLDLCSYYWHFISNFADMF--VITLP*KDHSLGT*T*R-DPSFKLLKQKLTMGSVL 220 ++++FL L YY FI NFAD+ + K+ + T D +FK LK ++ +L Sbjct: 441 EIKAFLGLTGYYRKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPIL 500
Query: 219 ILPDL*KPFDVYWDACGGKFRVVLMQD 139 +PD K F + DA VL QD Sbjct: 501 KVPDFTKKFTLTTDASDVALGAVLSQD 527
Score = 32.7 bits (73), Expect(2) = 1e-06 Identities = 13/25 (52%), Positives = 19/25 (76%) Frame = -1
Query: 76 EKELLAVIHALSQWKHYLLGANFTV 2 EKELLA++ A ++HYLLG +F + Sbjct: 549 EKELLAIVWATKTFRHYLLGRHFEI 573
>sp|P10401|POLY_DROME Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster GN=pol PE=4 SV=1 Length = 1035
Score = 37.7 bits (86), Expect(2) = 7e-04 Identities = 38/115 (33%), Positives = 49/115 (42%), Gaps = 18/115 (15%) Frame = -2
Query: 411 PTLENVLDVRSFLDLCSYYWHFISNFADMFVITLP*KDHSLG-----------------T 283 P + V VRSFL L SYY FI +FA I P D G Sbjct: 409 PEPDCVYKVRSFLGLASYYRVFIKDFA---AIARPITDILKGENGSVSKHMSKKIPVEFN 465
Query: 282 *T*RDPSFKLLKQKLTMGSVLI-LPDL*KPFDVYWDACGGKFRVVLMQDARVVAM 121 T R+ +F+ L+ L V++ PD KPFD+ DA VL Q+ R + M Sbjct: 466 ETQRN-AFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEGRPITM 519
Score = 23.9 bits (50), Expect(2) = 7e-04 Identities = 9/21 (42%), Positives = 17/21 (80%) Frame = -1
Query: 76 EKELLAVIHALSQWKHYLLGA 14 E+ELLA++ AL + +++L G+ Sbjct: 535 ERELLAIVWALGKLQNFLYGS 555
Score = 30.8 bits (68), Expect = 3.8 Identities = 15/24 (62%), Positives = 18/24 (75%) Frame = -1
Query: 490 RSFLGLCSYYRLLIWNFVDTVARP 419 RSFLGL SYYR+ I +F +ARP Sbjct: 418 RSFLGLASYYRVFIKDFA-AIARP 440
>sp|P92523|M860_ARATH Uncharacterized mitochondrial protein AtMg00860 OS=Arabidopsis thaliana GN=AtMg00860 PE=4 SV=1 Length = 158
Score = 37.7 bits (86), Expect = 0.031 Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 1/74 (1%) Frame = -2
Query: 411 PTLENVLDVRSFLDLCSYYWHFISNFADMF-VITLP*KDHSLGT*T*RDPSFKLLKQKLT 235 P +N ++R FL L YY F+ N+ + +T K +SL +FK LK +T Sbjct: 58 PEPKNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSLKWTEMAALAFKALKGAVT 117
Query: 234 MGSVLILPDL*KPF 193 VL LPDL PF Sbjct: 118 TLPVLALPDLKLPF 131
>sp|P21414|POL_GALV Pol polyprotein OS=Gibbon ape leukemia virus GN=pol PE=3 SV=1 Length = 1165
Score = 32.7 bits (73), Expect = 1.0 Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 2/84 (2%) Frame = -2
Query: 387 VRSFLDLCSYYWHFISNFADMFVITLP*KDHSLGT*T*RD--PSFKLLKQKLTMGSVLIL 214 VR FL + +I FA + P S+ + +F +K+ L L L Sbjct: 417 VREFLGTAGFCRLWIPGFASLAAPLYPLTKESIPFIWTEEHQQAFDHIKKALLSAPALAL 476
Query: 213 PDL*KPFDVYWDACGGKFRVVLMQ 142 PDL KPF +Y D G R VL Q Sbjct: 477 PDLTKPFTLYIDERAGVARGVLTQ 500
>sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster GN=pol PE=4 SV=1 Length = 1059
Score = 32.3 bits (72), Expect = 1.3 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = -1
Query: 76 EKELLAVIHALSQWKHYLLGANFTV 2 EKELLA++ A ++HYLLG F + Sbjct: 548 EKELLAIVWATKTFRHYLLGRQFLI 572
>sp|P03355|POL_MLVMO Pol polyprotein OS=Moloney murine leukemia virus GN=pol PE=1 SV=2 Length = 1199
Score = 32.0 bits (71), Expect = 1.7 Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 4/94 (4%) Frame = -2
Query: 411 PTLENVLDVRSFLDLCSYYWHFISNFADMFVITLP*KDHSLGT*T*RDP----SFKLLKQ 244 PT + +R FL + +I FA+M P GT P +++ +KQ Sbjct: 412 PTPKTPRQLREFLGTAGFCRLWIPGFAEMAAPLYPLT--KTGTLFNWGPDQQKAYQEIKQ 469
Query: 243 KLTMGSVLILPDL*KPFDVYWDACGGKFRVVLMQ 142 L L LPDL KPF+++ D G + VL Q Sbjct: 470 ALLTAPALGLPDLTKPFELFVDEKQGYAKGVLTQ 503
>sp|P26808|POL_MLVFP Pol polyprotein OS=Friend murine leukemia virus (isolate PVC-211) GN=pol PE=3 SV=1 Length = 1204
Score = 32.0 bits (71), Expect = 1.7 Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 4/94 (4%) Frame = -2
Query: 411 PTLENVLDVRSFLDLCSYYWHFISNFADMFVITLP*KDHSLGT*T*RDP----SFKLLKQ 244 PT + +R FL + +I FA+M P GT P +++ +KQ Sbjct: 417 PTPKTPRQLREFLGTAGFCRLWIPGFAEMAAPLYPLT--KTGTLFKWGPDQQKAYQEIKQ 474
Query: 243 KLTMGSVLILPDL*KPFDVYWDACGGKFRVVLMQ 142 L L LPDL KPF+++ D G + VL Q Sbjct: 475 ALLTAPALGLPDLTKPFELFVDEKQGYAKGVLTQ 508
>sp|P26809|POL_MLVFF Pol polyprotein OS=Friend murine leukemia virus (isolate FB29) GN=pol PE=3 SV=1 Length = 1204
Score = 32.0 bits (71), Expect = 1.7 Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 4/94 (4%) Frame = -2
Query: 411 PTLENVLDVRSFLDLCSYYWHFISNFADMFVITLP*KDHSLGT*T*RDP----SFKLLKQ 244 PT + +R FL + +I FA+M P GT P +++ +KQ Sbjct: 417 PTPKTPRQLREFLGTAGFCRLWIPGFAEMAAPLYPLT--KTGTLFEWGPDQQKAYQEIKQ 474
Query: 243 KLTMGSVLILPDL*KPFDVYWDACGGKFRVVLMQ 142 L L LPDL KPF+++ D G + VL Q Sbjct: 475 ALLTAPALGLPDLTKPFELFVDEKQGYAKGVLTQ 508
>sp|P03356|POL_MLVAV Pol polyprotein OS=AKV murine leukemia virus GN=pol PE=3 SV=2 Length = 1196
Score = 32.0 bits (71), Expect = 1.7 Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 4/94 (4%) Frame = -2
Query: 411 PTLENVLDVRSFLDLCSYYWHFISNFADMFVITLP*KDHSLGT*T*RDP----SFKLLKQ 244 PT + +R FL + +I FA+M P GT P +++ +KQ Sbjct: 412 PTPKTPRQLREFLGTAGFCRLWIPGFAEMAAPLYPLT--KTGTLFNWGPDQQKAYQEIKQ 469
Query: 243 KLTMGSVLILPDL*KPFDVYWDACGGKFRVVLMQ 142 L L LPDL KPF+++ D G + VL Q Sbjct: 470 ALLTAPALGLPDLTKPFELFVDEKQGYAKGVLTQ 503
>sp|P10394|POL4_DROME Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster GN=POL PE=4 SV=1 Length = 1237
Score = 32.0 bits (71), Expect = 1.7 Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 2/93 (2%) Frame = -2
Query: 411 PTLENVLDVRSFLDLCSYYWHFISNFAD--MFVITLP*KDHSLGT*T*RDPSFKLLKQKL 238 P + R F+ C+YY FI NFAD + L K+ +F LK +L Sbjct: 542 PVPHDADSARRFVAFCNYYRRFIKNFADYSRHITRLCKKNVPFEWTDECQKAFIHLKSQL 601
Query: 237 TMGSVLILPDL*KPFDVYWDACGGKFRVVLMQD 139 ++L PD K F + DA VL Q+ Sbjct: 602 INPTLLQYPDFSKEFCITTDASKQACGAVLTQN 634
|
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917617|Adiantum capillus-veneris mRNA, clone: YMU001_000103_C03. (511 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q0E1H7|Q0E1H7_ORYSJ Os02g0442200 protein OS=Oryza sativa subs... 66 2e-13 tr|Q8SA87|Q8SA87_MAIZE Putative polyprotein OS=Zea mays GN=Z195D... 65 4e-13 tr|Q01K20|Q01K20_ORYSA H0823A09.5 protein OS=Oryza sativa GN=H08... 63 8e-13 tr|Q5JPX0|Q5JPX0_ORYSA OSJNBa0085C10.21 protein OS=Oryza sativa ... 63 1e-12 tr|Q53NQ5|Q53NQ5_ORYSJ Retrotransposon protein, putative, Ty3-gy... 62 2e-12 tr|Q2QWQ0|Q2QWQ0_ORYSJ Retrotransposon protein, putative, Ty3-gy... 62 2e-12 tr|Q53MK5|Q53MK5_ORYSJ Retrotransposon protein, putative, Ty3-gy... 61 3e-12 tr|Q2QTE7|Q2QTE7_ORYSJ Retrotransposon protein, putative, Ty3-gy... 61 4e-12 tr|Q2QZE5|Q2QZE5_ORYSJ Retrotransposon protein, putative, Ty3-gy... 64 6e-09 tr|Q9XEM5|Q9XEM5_ORYSI Polyprotein OS=Oryza sativa subsp. indica... 63 7e-09 tr|Q7XVP5|Q7XVP5_ORYSJ OSJNBa0023J03.1 protein OS=Oryza sativa s... 63 7e-09 tr|Q01M25|Q01M25_ORYSA OSIGBa0144J05.2 protein OS=Oryza sativa G... 63 7e-09 tr|Q01M09|Q01M09_ORYSA OSIGBa0096F13.1 protein OS=Oryza sativa G... 63 7e-09 tr|Q7XWM8|Q7XWM8_ORYSJ OSJNBb0052B05.1 protein (B1234D02.7 prote... 62 1e-08 tr|Q2QQC0|Q2QQC0_ORYSJ Retrotransposon protein, putative, Ty3-gy... 62 2e-08 tr|Q8W2Q1|Q8W2Q1_ORYSA Putative polyprotein OS=Oryza sativa GN=O... 62 2e-08 tr|Q8SAZ4|Q8SAZ4_ORYSA Putative polyprotein OS=Oryza sativa GN=O... 62 2e-08 tr|Q8S823|Q8S823_ORYSA Putative retroelement OS=Oryza sativa GN=... 62 2e-08 tr|Q8S789|Q8S789_ORYSA Putative retroelement OS=Oryza sativa GN=... 62 2e-08 tr|Q8LM98|Q8LM98_ORYSJ Putative retroelement OS=Oryza sativa sub... 62 2e-08 tr|Q8LLZ4|Q8LLZ4_ORYSJ Putative polyprotein (Retrotransposon pro... 62 2e-08 tr|Q7XWB7|Q7XWB7_ORYSJ OSJNBa0061A09.9 protein OS=Oryza sativa s... 62 2e-08 tr|Q7XRL9|Q7XRL9_ORYSJ OSJNBa0039G19.3 protein OS=Oryza sativa s... 62 2e-08 tr|Q7XFT3|Q7XFT3_ORYSJ Retrotransposon protein, putative, Ty3-gy... 62 2e-08 tr|Q7XE62|Q7XE62_ORYSJ Retrotransposon protein, putative, Ty3-gy... 62 2e-08 tr|Q7G6D3|Q7G6D3_ORYSJ Putative polyprotein (Retrotransposon pro... 62 2e-08 tr|Q33A01|Q33A01_ORYSJ Retrotransposon protein, putative, Ty3-gy... 62 2e-08 tr|Q2R8V3|Q2R8V3_ORYSJ Retrotransposon protein, putative, Ty3-gy... 62 2e-08 tr|Q2R4T1|Q2R4T1_ORYSJ Retrotransposon protein, putative, Ty3-gy... 62 2e-08 tr|Q2R1T8|Q2R1T8_ORYSJ Retrotransposon protein, putative, Ty3-gy... 62 2e-08
>tr|Q0E1H7|Q0E1H7_ORYSJ Os02g0442200 protein OS=Oryza sativa subsp. japonica GN=Os02g0442200 PE=4 SV=1 Length = 683
Score = 66.2 bits (160), Expect(2) = 2e-13 Identities = 42/95 (44%), Positives = 54/95 (56%), Gaps = 2/95 (2%) Frame = -2
Query: 402 ENVLDVRSFLDLCSYYWHFISNFADMF--VITLP*KDHSLGT*T*RDPSFKLLKQKLTMG 229 +N D+RSFL L YY FI NF+ + + L K+ + SF+ LK+KLT Sbjct: 390 KNPSDIRSFLGLAGYYRRFIENFSKIAKPMTQLLKKNEKYVWSAECEQSFQTLKEKLTTA 449
Query: 228 SVLILPDL*KPFDVYWDACGGKFRVVLMQDARVVA 124 VLILPD+ K FD+Y DA VLMQ+ RVVA Sbjct: 450 PVLILPDIHKSFDIYCDASRQGLGCVLMQEGRVVA 484
Score = 32.0 bits (71), Expect(2) = 2e-13 Identities = 11/21 (52%), Positives = 17/21 (80%) Frame = -1
Query: 79 YEKELLAVIHALSQWKHYLLG 17 ++ EL +V+HAL W+HYL+G Sbjct: 500 HDLELASVVHALKIWRHYLIG 520
>tr|Q8SA87|Q8SA87_MAIZE Putative polyprotein OS=Zea mays GN=Z195D10.17 PE=4 SV=1 Length = 343
Score = 64.7 bits (156), Expect(2) = 4e-13 Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 2/93 (2%) Frame = -2
Query: 396 VLDVRSFLDLCSYYWHFISNFADMF--VITLP*KDHSLGT*T*RDPSFKLLKQKLTMGSV 223 V +VRSFL L YY FI FA + + +L K+ +F LK++L V Sbjct: 57 VTEVRSFLGLVGYYRRFIEGFAKIAKSITSLLEKEREFKWDEKCQDNFDQLKKRLMSPPV 116
Query: 222 LILPDL*KPFDVYWDACGGKFRVVLMQDARVVA 124 L++PDL K FD+Y DACG R VLMQ+ V+A Sbjct: 117 LVMPDLQKGFDIYCDACGQGLRCVLMQEGHVIA 149
Score = 32.7 bits (73), Expect(2) = 4e-13 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = -1
Query: 79 YEKELLAVIHALSQWKHYLLGANFTV 2 ++ EL AV+HAL W+HY++G V Sbjct: 165 HDLELAAVVHALKIWRHYIMGTKCQV 190
>tr|Q01K20|Q01K20_ORYSA H0823A09.5 protein OS=Oryza sativa GN=H0823A09.5 PE=4 SV=1 Length = 1716
Score = 63.2 bits (152), Expect(2) = 8e-13 Identities = 46/107 (42%), Positives = 54/107 (50%), Gaps = 2/107 (1%) Frame = -2
Query: 438 WTPLHAHDCPTLENVLDVRSFLDLCSYYWHFISNFADMF--VITLP*KDHSLGT*T*RDP 265 WTP + V +RSFL L YY FI NF+ + + L KD T D Sbjct: 1069 WTPP--------KTVSQIRSFLGLARYYRRFIENFSRIARPMTQLLKKDEKFKWTTECDK 1120
Query: 264 SFKLLKQKLTMGSVLILPDL*KPFDVYWDACGGKFRVVLMQDARVVA 124 SF+ LK+KL VLILPD K F VY DA VLMQ+ RVVA Sbjct: 1121 SFEELKKKLVSAPVLILPDQMKDFQVYCDASRHGLGCVLMQEGRVVA 1167
Score = 33.1 bits (74), Expect(2) = 8e-13 Identities = 12/21 (57%), Positives = 17/21 (80%) Frame = -1
Query: 79 YEKELLAVIHALSQWKHYLLG 17 ++ EL AV+HAL W+HYL+G Sbjct: 1183 HDLELAAVVHALKIWRHYLIG 1203
>tr|Q5JPX0|Q5JPX0_ORYSA OSJNBa0085C10.21 protein OS=Oryza sativa GN=OSJNBa0085C10.21 PE=4 SV=1 Length = 1825
Score = 62.8 bits (151), Expect(2) = 1e-12 Identities = 41/95 (43%), Positives = 50/95 (52%), Gaps = 2/95 (2%) Frame = -2
Query: 402 ENVLDVRSFLDLCSYYWHFISNFADMF--VITLP*KDHSLGT*T*RDPSFKLLKQKLTMG 229 + V VRSFL L YYW FI NF+ + + L K+ + +F+ LK+KL Sbjct: 1113 KTVTQVRSFLGLAGYYWRFIENFSKIARPMTQLLKKEEKFVWSPQCEKAFQTLKEKLVSS 1172
Query: 228 SVLILPDL*KPFDVYWDACGGKFRVVLMQDARVVA 124 VLILPD K F VY DA VLMQD VVA Sbjct: 1173 PVLILPDTRKDFMVYCDASRQGLGCVLMQDGHVVA 1207
Score = 33.1 bits (74), Expect(2) = 1e-12 Identities = 12/21 (57%), Positives = 17/21 (80%) Frame = -1
Query: 79 YEKELLAVIHALSQWKHYLLG 17 ++ EL AV+HAL W+HYL+G Sbjct: 1223 HDLELAAVVHALKIWRHYLIG 1243
>tr|Q53NQ5|Q53NQ5_ORYSJ Retrotransposon protein, putative, Ty3-gypsy subclass OS=Oryza sativa subsp. japonica GN=LOC_Os11g07790 PE=4 SV=1 Length = 1760
Score = 61.6 bits (148), Expect(2) = 2e-12 Identities = 45/107 (42%), Positives = 53/107 (49%), Gaps = 2/107 (1%) Frame = -2
Query: 438 WTPLHAHDCPTLENVLDVRSFLDLCSYYWHFISNFADMF--VITLP*KDHSLGT*T*RDP 265 WTP + V +RSFL L YY FI NF+ + + L KD D Sbjct: 1058 WTPP--------KTVSQIRSFLGLAGYYRRFIENFSRIARPMTRLLKKDEKFKWTAECDK 1109
Query: 264 SFKLLKQKLTMGSVLILPDL*KPFDVYWDACGGKFRVVLMQDARVVA 124 SF+ LK+KL VLILPD K F VY DA VLMQ+ RVVA Sbjct: 1110 SFEELKKKLVSAPVLILPDQMKDFQVYCDASRHGLGCVLMQEGRVVA 1156
Score = 33.1 bits (74), Expect(2) = 2e-12 Identities = 12/21 (57%), Positives = 17/21 (80%) Frame = -1
Query: 79 YEKELLAVIHALSQWKHYLLG 17 ++ EL AV+HAL W+HYL+G Sbjct: 1172 HDLELAAVVHALKIWRHYLIG 1192
>tr|Q2QWQ0|Q2QWQ0_ORYSJ Retrotransposon protein, putative, Ty3-gypsy subclass OS=Oryza sativa subsp. japonica GN=LOC_Os12g08620 PE=4 SV=1 Length = 1197
Score = 61.6 bits (148), Expect(2) = 2e-12 Identities = 44/107 (41%), Positives = 54/107 (50%), Gaps = 2/107 (1%) Frame = -2
Query: 438 WTPLHAHDCPTLENVLDVRSFLDLCSYYWHFISNFADMF--VITLP*KDHSLGT*T*RDP 265 WTP + V +RSFL L YY FI NF+ + + L K+ D Sbjct: 696 WTPP--------KTVSQIRSFLGLAGYYRRFIENFSRIARPMTQLLKKNEKFKWTAECDQ 747
Query: 264 SFKLLKQKLTMGSVLILPDL*KPFDVYWDACGGKFRVVLMQDARVVA 124 SF+ LK+KL VLILPD K F VY+DA VLMQ+ RVVA Sbjct: 748 SFEKLKKKLVTAPVLILPDQTKDFQVYYDASRHGLGCVLMQEGRVVA 794
Score = 33.1 bits (74), Expect(2) = 2e-12 Identities = 12/21 (57%), Positives = 17/21 (80%) Frame = -1
Query: 79 YEKELLAVIHALSQWKHYLLG 17 ++ EL AV+HAL W+HYL+G Sbjct: 810 HDLELAAVVHALKIWRHYLIG 830
>tr|Q53MK5|Q53MK5_ORYSJ Retrotransposon protein, putative, Ty3-gypsy subclass OS=Oryza sativa subsp. japonica GN=LOC_Os11g17230 PE=4 SV=1 Length = 1285
Score = 61.2 bits (147), Expect(2) = 3e-12 Identities = 48/120 (40%), Positives = 58/120 (48%), Gaps = 2/120 (1%) Frame = -2
Query: 438 WTPLHAHDCPTLENVLDVRSFLDLCSYYWHFISNFADMF--VITLP*KDHSLGT*T*RDP 265 WTP + V +RSFL L YY FI NF+ + + L KD D Sbjct: 592 WTPP--------KTVSQIRSFLGLAGYYRRFIENFSRIAQPMTQLLKKDEKFKWTAECDK 643
Query: 264 SFKLLKQKLTMGSVLILPDL*KPFDVYWDACGGKFRVVLMQDARVVAMRTGYF*RLRELH 85 SF+ LK+KL VLILPD K F VY DA VLMQ+ RVVA + R+LH Sbjct: 644 SFEELKKKLVSAPVLILPDQMKDFQVYCDASRLGLGCVLMQEGRVVAYAS------RQLH 697
Score = 33.1 bits (74), Expect(2) = 3e-12 Identities = 12/21 (57%), Positives = 17/21 (80%) Frame = -1
Query: 79 YEKELLAVIHALSQWKHYLLG 17 ++ EL AV+HAL W+HYL+G Sbjct: 706 HDLELAAVVHALKIWRHYLIG 726
>tr|Q2QTE7|Q2QTE7_ORYSJ Retrotransposon protein, putative, Ty3-gypsy subclass OS=Oryza sativa subsp. japonica GN=LOC_Os12g19900 PE=4 SV=1 Length = 1791
Score = 60.8 bits (146), Expect(2) = 4e-12 Identities = 39/95 (41%), Positives = 50/95 (52%), Gaps = 2/95 (2%) Frame = -2
Query: 402 ENVLDVRSFLDLCSYYWHFISNFADMF--VITLP*KDHSLGT*T*RDPSFKLLKQKLTMG 229 + V +RSFL L YYW FI NF+ + + L K+ + +F+ LK+KL Sbjct: 1077 KTVTQIRSFLGLAGYYWRFIENFSKIARPMTQLLKKEEKFVWSPQCEKAFQTLKEKLVSS 1136
Query: 228 SVLILPDL*KPFDVYWDACGGKFRVVLMQDARVVA 124 VLILPD K F VY DA VLMQ+ VVA Sbjct: 1137 PVLILPDTRKDFMVYCDASRQGLGCVLMQEGHVVA 1171
Score = 33.1 bits (74), Expect(2) = 4e-12 Identities = 12/21 (57%), Positives = 17/21 (80%) Frame = -1
Query: 79 YEKELLAVIHALSQWKHYLLG 17 ++ EL AV+HAL W+HYL+G Sbjct: 1187 HDLELAAVVHALKIWRHYLIG 1207
>tr|Q2QZE5|Q2QZE5_ORYSJ Retrotransposon protein, putative, Ty3-gypsy subclass OS=Oryza sativa subsp. japonica GN=LOC_Os11g46270 PE=4 SV=1 Length = 785
Score = 63.5 bits (153), Expect = 6e-09 Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 2/95 (2%) Frame = -2
Query: 402 ENVLDVRSFLDLCSYYWHFISNFADMF--VITLP*KDHSLGT*T*RDPSFKLLKQKLTMG 229 ++V +VRSFL L YY FI NF+ + + L K+ T + SF+ LK++LT Sbjct: 84 QSVPEVRSFLGLAGYYRRFIENFSRIARPMTQLLKKEQKFEWSTACEASFQELKRRLTTA 143
Query: 228 SVLILPDL*KPFDVYWDACGGKFRVVLMQDARVVA 124 VL++PD K FD+Y DA VLMQD +VVA Sbjct: 144 PVLVMPDTRKGFDIYCDASHHGLGCVLMQDGKVVA 178
Score = 35.8 bits (81), Expect = 1.3 Identities = 44/165 (26%), Positives = 60/165 (36%), Gaps = 7/165 (4%) Frame = -1
Query: 490 RSFLGLCSYYRLLIWNFVDTVARPRLSYIGECA*RXXXXXXXXXXXXXXXXFCGYVRYYT 311 RSFLGL YYR I NF +ARP + + Sbjct: 90 RSFLGLAGYYRRFIENF-SRIARPMTQLLKK----------------------------- 119
Query: 310 PLERPFTWDLNLERSV------I*TAQAKVDHGVRIDSTRFVEAF*RLLGCLWG*ISSGL 149 E+ F W E S + TA V R + +A LGC+ Sbjct: 120 --EQKFEWSTACEASFQELKRRLTTAPVLVMPDTRKGFDIYCDASHHGLGCVLM-----Q 172
Query: 148 DARCPCSSYEDWILLKTKRVAY-FYEKELLAVIHALSQWKHYLLG 17 D + + L+ V Y ++ EL AV+HAL W+HYL+G Sbjct: 173 DGKVVAYASRQ---LRPHEVNYPTHDLELAAVVHALKIWRHYLIG 214
>tr|Q9XEM5|Q9XEM5_ORYSI Polyprotein OS=Oryza sativa subsp. indica PE=4 SV=1 Length = 1521
Score = 63.2 bits (152), Expect = 7e-09 Identities = 46/107 (42%), Positives = 54/107 (50%), Gaps = 2/107 (1%) Frame = -2
Query: 438 WTPLHAHDCPTLENVLDVRSFLDLCSYYWHFISNFADMF--VITLP*KDHSLGT*T*RDP 265 WTP + V +RSFL L YY FI NF+ + + L KD T D Sbjct: 805 WTPP--------KTVSQIRSFLGLAGYYRRFIENFSRIARPMTQLLKKDEKFKWTTECDK 856
Query: 264 SFKLLKQKLTMGSVLILPDL*KPFDVYWDACGGKFRVVLMQDARVVA 124 SF+ LK+KL VLILPD K F VY DA VLMQ+ RVVA Sbjct: 857 SFEELKKKLVSAPVLILPDPTKDFQVYCDASRHGLGCVLMQEGRVVA 903
Score = 33.9 bits (76), Expect = 4.8 Identities = 42/164 (25%), Positives = 60/164 (36%), Gaps = 6/164 (3%) Frame = -1
Query: 490 RSFLGLCSYYRLLIWNFVDTVARPRLSYIGECA*RXXXXXXXXXXXXXXXXFCGYVRYYT 311 RSFLGL YYR I NF +ARP + + Sbjct: 815 RSFLGLAGYYRRFIENF-SRIARPMTQLLKK----------------------------- 844
Query: 310 PLERPFTWDLNLERSVI*TAQAKVDHGVRI--DSTR----FVEAF*RLLGCLWG*ISSGL 149 + F W ++S + V V I D T+ + +A LGC+ L Sbjct: 845 --DEKFKWTTECDKSFEELKKKLVSAPVLILPDPTKDFQVYCDASRHGLGCV-------L 895
Query: 148 DARCPCSSYEDWILLKTKRVAYFYEKELLAVIHALSQWKHYLLG 17 +Y L + ++ EL AV+HAL W+HYL+G Sbjct: 896 MQEGRVVAYASRQLRPHEGNYPTHDLELAAVVHALKIWRHYLIG 939
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