BP917535 |
Clone id |
YMU001_000102_A11 |
Library |
YMU01 |
Length |
519 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000102_A11. |
Accession |
BP917535 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3116Contig1 |
Sequence |
TAGGGCCAGCATGAAAAATTGTTCCACTTCAAGATTAACTGGTAGTTCTCGACCTTGTTC AATCAGTCTGCGATGGGCAACGTCACGACAAGTTACCAAACGGCCAGTCAAATAAACTAC ATCACCGACTTTAAGGTCTAAAAGGTCTTCATCTTTGATTGGCGTTGTTAGAATATATTT CATAGTACAACTCCTTCGTGAGACAAGATTTCATACGACATATCTGGATTAATCTTAATT TTGCCACGGCGATGTGCCCAGCAACCTGTGTTTACGGCAACACCAATTGTTGATGGATGA CGTGCAGAAGATTCAATATTGACCCCCATTACACTGTTATTGCCTGTGAGTCCCTGAGGA CCAATACCAATTTCATTAAGACCTTGTTCTAACAGTTGTTCCATTAAGGCAGCGCGTGGG TTCTCACTTGTTGAGTCAACTGGACGCATAATCGCGAATTTAGAAAGACGAGCTGCGGTT TCAACCGAAGTTGATACGCCAACACCGACCAGTAACGGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q1R6S0 |
Definition |
sp|Q1R6S0|TTDA_ECOUT L(+)-tartrate dehydratase subunit alpha OS=Escherichia coli (strain UTI89 / UPEC) |
Align length |
107 |
Score (bit) |
155.0 |
E-value |
8.0e-38 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q46PD8 |
Definition |
tr|Q46PD8|Q46PD8_RALEJ Fe-S type hydro-lyases tartrate/fumarate alpha region OS=Ralstonia eutropha (strain JMP134) |
Align length |
112 |
Score (bit) |
208.0 |
E-value |
1.0e-52 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917535|Adiantum capillus-veneris mRNA, clone: YMU001_000102_A11. (519 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q46PD8|Q46PD8_RALEJ Fe-S type hydro-lyases tartrate/fumarate ... 208 1e-52 tr|B2JUS9|B2JUS9_BURP8 Hydro-lyase, Fe-S type, tartrate/fumarate... 208 1e-52 tr|B1J957|B1J957_PSEPW Hydro-lyase, Fe-S type, tartrate/fumarate... 192 8e-48 tr|Q4J309|Q4J309_AZOVI Fe-S type hydro-lyases tartrate/fumarate ... 190 4e-47 tr|Q2W2E2|Q2W2E2_MAGMM Tartrate dehydratase alpha subunit/Fumara... 181 2e-44 tr|B7LRK6|B7LRK6_ESCFE L(+)-tartrate dehydratase alpha subunit O... 162 1e-38 tr|A6TEP9|A6TEP9_KLEP7 Putative tartrate dehydratase alpha subun... 161 2e-38 tr|B5REV3|B5REV3_SALG2 Tartrate dehydratase OS=Salmonella gallin... 160 4e-38 tr|B5R0M8|B5R0M8_SALEP Tartrate dehydratase OS=Salmonella enteri... 160 4e-38 tr|B5FIT3|B5FIT3_SALDC L(+)-tartrate dehydratase subunit alpha O... 160 4e-38 tr|B5NJE9|B5NJE9_SALET L(+)-tartrate dehydratase subunit alpha O... 160 5e-38 tr|Q8XFJ9|Q8XFJ9_SALTI Tartrate dehydratase OS=Salmonella typhi ... 159 6e-38 tr|Q7CPN1|Q7CPN1_SALTY Putative tartrate dehydratase alpha subun... 159 6e-38 tr|Q57JB3|Q57JB3_SALCH Putative tartrate dehydratase alpha subun... 159 6e-38 tr|B5F7L5|B5F7L5_SALA4 L(+)-tartrate dehydratase subunit alpha (... 159 6e-38 tr|B4TWK5|B4TWK5_SALSV L(+)-tartrate dehydratase subunit alpha (... 159 6e-38 tr|B4TJS9|B4TJS9_SALHS L(+)-tartrate dehydratase subunit alpha (... 159 6e-38 tr|B4T765|B4T765_SALNS L(+)-tartrate dehydratase subunit alpha (... 159 6e-38 tr|A9N851|A9N851_SALPB Putative uncharacterized protein OS=Salmo... 159 6e-38 tr|Q83TY1|Q83TY1_SALET Putative L(+)-tartrate dehydratase alpha ... 159 6e-38 tr|B5Q8X5|B5Q8X5_SALVI L(+)-tartrate dehydratase subunit alpha O... 159 6e-38 tr|B5PWC4|B5PWC4_SALHA L(+)-tartrate dehydratase subunit alpha O... 159 6e-38 tr|B5PMA4|B5PMA4_SALET L(+)-tartrate dehydratase subunit alpha O... 159 6e-38 tr|B5P9F9|B5P9F9_SALET L(+)-tartrate dehydratase subunit alpha O... 159 6e-38 tr|B5NVZ6|B5NVZ6_SALET L(+)-tartrate dehydratase subunit alpha O... 159 6e-38 tr|B5N4F2|B5N4F2_SALET L(+)-tartrate dehydratase subunit alpha O... 159 6e-38 tr|B5MRF6|B5MRF6_SALET L(+)-tartrate dehydratase subunit alpha O... 159 6e-38 tr|B5CJM2|B5CJM2_SALET L(+)-tartrate dehydratase subunit alpha (... 159 6e-38 tr|B5C1R7|B5C1R7_SALET L(+)-tartrate dehydratase subunit alpha (... 159 6e-38 tr|B4A2V3|B4A2V3_SALNE L(+)-tartrate dehydratase subunit alpha (... 159 6e-38
>tr|Q46PD8|Q46PD8_RALEJ Fe-S type hydro-lyases tartrate/fumarate alpha region OS=Ralstonia eutropha (strain JMP134) GN=Reut_B5651 PE=4 SV=1 Length = 299
Score = 208 bits (530), Expect = 1e-52 Identities = 104/112 (92%), Positives = 107/112 (95%) Frame = -2
Query: 518 PLLVGVGVSTSVETAARLSKFAIMRPVDSTSENPRAALMEQLLEQGLNEIGIGPQGLTGN 339 PLLVGVGVSTSVETAARLSK AIMRPVDS S NPRAALME LLEQGLNE+GIGPQGLTGN Sbjct: 188 PLLVGVGVSTSVETAARLSKLAIMRPVDSRSANPRAALMEDLLEQGLNEVGIGPQGLTGN 247
Query: 338 NSVMGVNIESSARHPSTIGVAVNTGCWAHRRGKIKINPDMSYEILSHEGVVL 183 NSVMGVNIESSARHPSTIGVAVNTGCWAHRRGKI+IN DMSYEI+SHEGVVL Sbjct: 248 NSVMGVNIESSARHPSTIGVAVNTGCWAHRRGKIRINADMSYEIISHEGVVL 299
>tr|B2JUS9|B2JUS9_BURP8 Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=Bphy_5633 PE=4 SV=1 Length = 299
Score = 208 bits (530), Expect = 1e-52 Identities = 103/112 (91%), Positives = 108/112 (96%) Frame = -2
Query: 518 PLLVGVGVSTSVETAARLSKFAIMRPVDSTSENPRAALMEQLLEQGLNEIGIGPQGLTGN 339 PLLVGVGVSTSVETAARLSK AI+RPVDS S NPRAALME+LLEQGLNE+GIGPQGLTGN Sbjct: 188 PLLVGVGVSTSVETAARLSKLAILRPVDSKSANPRAALMEELLEQGLNEVGIGPQGLTGN 247
Query: 338 NSVMGVNIESSARHPSTIGVAVNTGCWAHRRGKIKINPDMSYEILSHEGVVL 183 NSVMGVNIESSARHPSTIGVA+NTGCWAHRRGKIKIN D+SYEILSHEGVVL Sbjct: 248 NSVMGVNIESSARHPSTIGVAINTGCWAHRRGKIKINADLSYEILSHEGVVL 299
>tr|B1J957|B1J957_PSEPW Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit OS=Pseudomonas putida (strain W619) GN=PputW619_2840 PE=4 SV=1 Length = 299
Score = 192 bits (488), Expect = 8e-48 Identities = 96/112 (85%), Positives = 105/112 (93%) Frame = -2
Query: 518 PLLVGVGVSTSVETAARLSKFAIMRPVDSTSENPRAALMEQLLEQGLNEIGIGPQGLTGN 339 PLLVGVGVSTSVETAARLSK AI+RPVDS+ N AA+ME+LLE GLNEIGIGPQGLTGN Sbjct: 188 PLLVGVGVSTSVETAARLSKRAILRPVDSSHPNESAAMMEKLLEDGLNEIGIGPQGLTGN 247
Query: 338 NSVMGVNIESSARHPSTIGVAVNTGCWAHRRGKIKINPDMSYEILSHEGVVL 183 +SVMGVNIESSARHPSTIGVAV+TGCWAHRRGKI+IN D+SY+ILSHEGVVL Sbjct: 248 SSVMGVNIESSARHPSTIGVAVSTGCWAHRRGKIRINADLSYDILSHEGVVL 299
>tr|Q4J309|Q4J309_AZOVI Fe-S type hydro-lyases tartrate/fumarate alpha region OS=Azotobacter vinelandii DJ GN=AvinDRAFT_7602 PE=4 SV=1 Length = 299
Score = 190 bits (482), Expect = 4e-47 Identities = 96/112 (85%), Positives = 103/112 (91%) Frame = -2
Query: 518 PLLVGVGVSTSVETAARLSKFAIMRPVDSTSENPRAALMEQLLEQGLNEIGIGPQGLTGN 339 PLLVGVGVSTSVETAARLSK AI+RPVDS N AA ME+LLE GLNEIGIGPQGLTGN Sbjct: 188 PLLVGVGVSTSVETAARLSKRAILRPVDSCHPNENAAKMEKLLEAGLNEIGIGPQGLTGN 247
Query: 338 NSVMGVNIESSARHPSTIGVAVNTGCWAHRRGKIKINPDMSYEILSHEGVVL 183 +SVMGVNIESSARHPSTIGVAV+TGCWAHRRGKI+IN D+SY+ILSHEGVVL Sbjct: 248 SSVMGVNIESSARHPSTIGVAVSTGCWAHRRGKIRINADLSYDILSHEGVVL 299
>tr|Q2W2E2|Q2W2E2_MAGMM Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=amb3179 PE=4 SV=1 Length = 299
Score = 181 bits (459), Expect = 2e-44 Identities = 90/112 (80%), Positives = 99/112 (88%) Frame = -2
Query: 518 PLLVGVGVSTSVETAARLSKFAIMRPVDSTSENPRAALMEQLLEQGLNEIGIGPQGLTGN 339 PLL+GVGVSTS ETAARLSK AI+RPV S N AA ME LLE GLNE+GIGPQGLTGN Sbjct: 188 PLLIGVGVSTSAETAARLSKKAILRPVGSQHGNANAAKMETLLEDGLNELGIGPQGLTGN 247
Query: 338 NSVMGVNIESSARHPSTIGVAVNTGCWAHRRGKIKINPDMSYEILSHEGVVL 183 +SVMGVNIESSARHPSTIGVAV+TGCWAHRRG+I+ N D+SYEI+SHEGVVL Sbjct: 248 SSVMGVNIESSARHPSTIGVAVSTGCWAHRRGRIRFNADLSYEIVSHEGVVL 299
>tr|B7LRK6|B7LRK6_ESCFE L(+)-tartrate dehydratase alpha subunit OS=Escherichia fergusonii GN=ttdA PE=4 SV=1 Length = 299
Score = 162 bits (409), Expect = 1e-38 Identities = 77/112 (68%), Positives = 96/112 (85%) Frame = -2
Query: 518 PLLVGVGVSTSVETAARLSKFAIMRPVDSTSENPRAALMEQLLEQGLNEIGIGPQGLTGN 339 PLLVGVGV+TSVETAA LSK A+MRPV S +EN RAA +E++LE+G+N+IG+GPQG++GN Sbjct: 188 PLLVGVGVATSVETAALLSKKALMRPVGSHNENERAASLEKMLEEGINKIGLGPQGMSGN 247
Query: 338 NSVMGVNIESSARHPSTIGVAVNTGCWAHRRGKIKINPDMSYEILSHEGVVL 183 SVMGVNIE++ARHPSTIGVAVN GCW+HR+G I + D++Y I SH GV L Sbjct: 248 TSVMGVNIENTARHPSTIGVAVNVGCWSHRKGHIVFDKDLNYTITSHTGVTL 299
>tr|A6TEP9|A6TEP9_KLEP7 Putative tartrate dehydratase alpha subunit OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=KPN78578_36090 PE=4 SV=1 Length = 290
Score = 161 bits (407), Expect = 2e-38 Identities = 75/110 (68%), Positives = 96/110 (87%) Frame = -2
Query: 518 PLLVGVGVSTSVETAARLSKFAIMRPVDSTSENPRAALMEQLLEQGLNEIGIGPQGLTGN 339 PLLVGVGV+TSVETAA LSK A+MRP+ S ++N RAAL+E++LE G+N+IG+GPQG++GN Sbjct: 179 PLLVGVGVATSVETAALLSKKALMRPIGSHNDNERAALLEKMLEDGINKIGLGPQGMSGN 238
Query: 338 NSVMGVNIESSARHPSTIGVAVNTGCWAHRRGKIKINPDMSYEILSHEGV 189 SVMGVNIE++ARHPSTIGVAVN GCW+HR+G I + D++Y I SH+GV Sbjct: 239 TSVMGVNIENTARHPSTIGVAVNVGCWSHRKGHIVFDKDLNYTITSHKGV 288
>tr|B5REV3|B5REV3_SALG2 Tartrate dehydratase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=SG3245 PE=4 SV=1 Length = 299
Score = 160 bits (405), Expect = 4e-38 Identities = 75/110 (68%), Positives = 95/110 (86%) Frame = -2
Query: 518 PLLVGVGVSTSVETAARLSKFAIMRPVDSTSENPRAALMEQLLEQGLNEIGIGPQGLTGN 339 PLLVGVGV+TSVETAA LSK A+MRP+ S +EN RAA +E++LE+G+N+IG+GPQG++GN Sbjct: 188 PLLVGVGVATSVETAALLSKKALMRPIGSHNENERAASLEKMLEEGINKIGLGPQGMSGN 247
Query: 338 NSVMGVNIESSARHPSTIGVAVNTGCWAHRRGKIKINPDMSYEILSHEGV 189 SVMGVNIE++ARHPSTIGVAVN GCW+HR+G I + D++Y I SH GV Sbjct: 248 TSVMGVNIENTARHPSTIGVAVNVGCWSHRKGHIVFDKDLNYTITSHSGV 297
>tr|B5R0M8|B5R0M8_SALEP Tartrate dehydratase OS=Salmonella enteritidis PT4 (strain P125109) GN=SEN3188 PE=4 SV=1 Length = 299
Score = 160 bits (405), Expect = 4e-38 Identities = 75/110 (68%), Positives = 95/110 (86%) Frame = -2
Query: 518 PLLVGVGVSTSVETAARLSKFAIMRPVDSTSENPRAALMEQLLEQGLNEIGIGPQGLTGN 339 PLLVGVGV+TSVETAA LSK A+MRP+ S +EN RAA +E++LE+G+N+IG+GPQG++GN Sbjct: 188 PLLVGVGVATSVETAALLSKKALMRPIGSHNENERAASLEKMLEEGINKIGLGPQGMSGN 247
Query: 338 NSVMGVNIESSARHPSTIGVAVNTGCWAHRRGKIKINPDMSYEILSHEGV 189 SVMGVNIE++ARHPSTIGVAVN GCW+HR+G I + D++Y I SH GV Sbjct: 248 TSVMGVNIENTARHPSTIGVAVNVGCWSHRKGHIVFDKDLNYTITSHSGV 297
>tr|B5FIT3|B5FIT3_SALDC L(+)-tartrate dehydratase subunit alpha OS=Salmonella dublin (strain CT_02021853) GN=SeD_A3715 PE=4 SV=1 Length = 299
Score = 160 bits (405), Expect = 4e-38 Identities = 75/110 (68%), Positives = 95/110 (86%) Frame = -2
Query: 518 PLLVGVGVSTSVETAARLSKFAIMRPVDSTSENPRAALMEQLLEQGLNEIGIGPQGLTGN 339 PLLVGVGV+TSVETAA LSK A+MRP+ S +EN RAA +E++LE+G+N+IG+GPQG++GN Sbjct: 188 PLLVGVGVATSVETAALLSKKALMRPIGSHNENERAASLEKMLEEGINKIGLGPQGMSGN 247
Query: 338 NSVMGVNIESSARHPSTIGVAVNTGCWAHRRGKIKINPDMSYEILSHEGV 189 SVMGVNIE++ARHPSTIGVAVN GCW+HR+G I + D++Y I SH GV Sbjct: 248 TSVMGVNIENTARHPSTIGVAVNVGCWSHRKGHIVFDKDLNYTITSHSGV 297
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