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NBDC - LSDB Archive
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BP917417
Clone id YMU001_000100_E10
Library
Length 489
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000100_E10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CACCAATCTTCATCAACTCCCTCTCCTAAAGCTGCCTTCCCTGCTAACATAATTTGGTCA
TACTCTTCTCGTGCCTTACGAACAGGAGCTTCTAAAGCCAACAAAAACACTTTGCACACA
GGCCTTTTCTGTAAAAGCTTGCTTTCCACCTTGGGCCTTTTCGAACGATCAAGCATACAT
GTTGCAGGAGGACTTGATACTTGTTTTTTGAGTGGGTTACTGTAATCAGACCCAATAGAA
AGTCCCATTTCTGGCTCTTTCACCACCACAGTTGAATTACGTTTACTTGAATCTTCCAAA
TGCAGCAGCCCCCCACGATGGACAGCACCCCAATGTGGTGTACCACATTCTCCTCTACCA
GAACTCCATTCCTCATGAACTGGCTTCAAGGTTCCAACTTCATGGTCGGGCAAAAAAGAT
GGAGAGAATGATTGGGAATCAGAGAGCTTCACTTCACTGACATAAGAACCGAAAGGGGCT
TCGCCAATC
■■Homology search results ■■ -
sp_hit_id Q5F3P8
Definition sp|Q5F3P8|SET1B_CHICK Histone-lysine N-methyltransferase SETD1B OS=Gallus gallus
Align length 86
Score (bit) 32.7
E-value 0.92
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917417|Adiantum capillus-veneris mRNA, clone:
YMU001_000100_E10.
         (489 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5F3P8|SET1B_CHICK Histone-lysine N-methyltransferase SETD1B ...    33   0.92 
sp|Q8CH77|NAV1_MOUSE Neuron navigator 1 OS=Mus musculus GN=Nav1 ...    32   2.0  
sp|Q2QQX6|ARFX_ORYSJ Auxin response factor 24 OS=Oryza sativa su...    31   2.7  
sp|Q831U3|SYGB_ENTFA Glycyl-tRNA synthetase beta subunit OS=Ente...    31   3.4  
sp|A4SJ26|RUVB_AERS4 Holliday junction ATP-dependent DNA helicas...    31   3.4  
sp|Q9DA32|SPA4L_MOUSE Sperm-associated antigen 4-like protein OS...    30   4.5  
sp|Q9RLV9|PHLC_LISIV Sphingomyelinase C OS=Listeria ivanovii GN=...    30   5.8  
sp|Q9GSX9|RIC8_CAEEL Synembryn OS=Caenorhabditis elegans GN=ric-...    30   7.6  
sp|P52841|SUHB_CAVPO 3-beta-hydroxysteroid sulfotransferase OS=C...    29   9.9  
sp|Q8BGZ2|F168A_MOUSE UPF0541 protein FAM168A OS=Mus musculus GN...    29   9.9  
sp|Q92567|F168A_HUMAN UPF0541 protein FAM168A OS=Homo sapiens GN...    29   9.9  
sp|P98072|ENTK_BOVIN Enteropeptidase OS=Bos taurus GN=PRSS7 PE=1...    29   9.9  

>sp|Q5F3P8|SET1B_CHICK Histone-lysine N-methyltransferase SETD1B
            OS=Gallus gallus GN=SETD1B PE=2 SV=1
          Length = 2008

 Score = 32.7 bits (73), Expect = 0.92
 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
 Frame = +1

Query: 238  ESPISGSFTTTVELRLLESSKCSSPPRWTAPQCGVPHSPLPELHSS*T----GFKVPTSW 405
            ++P++GS + T+    +  S  S P +      G+P +P  + + + T    G  +P   
Sbjct: 1415 DAPLTGS-SLTLSSPQVPGSPFSYPSQSPGINSGIPRTPGRDFNFTPTFPEAGATIPCLL 1473

Query: 406  SGKKDGENDWESESFTSLT*EPKGAS 483
            SGKK  E+D + + F     EP GAS
Sbjct: 1474 SGKKQSEDDLDEKPFK----EPLGAS 1495


>sp|Q8CH77|NAV1_MOUSE Neuron navigator 1 OS=Mus musculus GN=Nav1 PE=1
            SV=2
          Length = 1875

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 32/106 (30%), Positives = 44/106 (41%)
 Frame = +1

Query: 55   WSYSSRALRTGASKANKNTLHTGLFCKSLLSTLGLFERSSIHVAGGLDTCFLSGLL*SDP 234
            WS S RA +  +S+ ++NTL        L S     ER   H AGGL        L S P
Sbjct: 922  WSGSPRAGQLDSSQRDRNTLPKKGLRYQLQSQEETKERRHSHTAGGLPESDDQAELPSPP 981

Query: 235  IESPISGSFTTTVELRLLESSKCSSPPRWTAPQCGVPHSPLPELHS 372
                +S S +   +L  + S   ++ PR T       H    EL+S
Sbjct: 982  ---ALSMSLSAKGQLTNIVSPTAATTPRITRSNSIPTHEAAFELYS 1024


>sp|Q2QQX6|ARFX_ORYSJ Auxin response factor 24 OS=Oryza sativa
           subsp. japonica GN=ARF24 PE=2 SV=1
          Length = 841

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
 Frame = +1

Query: 199 TCFLSGLL*SDPIE-----SPISGSFTTTVELRLLESSKCSSPPRWTAPQCGVPHSPLPE 363
           +C L G+    P +     SP S +F   ++   LE  +CS P +   P  G  H    E
Sbjct: 632 SCMLFGISLDSPAKPELLISPPSVAFDGKLQQDALEEDECSDPSKTVKPLDGAQHDSARE 691

Query: 364 LHSS 375
            H S
Sbjct: 692 KHQS 695


>sp|Q831U3|SYGB_ENTFA Glycyl-tRNA synthetase beta subunit
           OS=Enterococcus faecalis GN=glyS PE=3 SV=1
          Length = 694

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
 Frame = -2

Query: 431 SFSPSFL--PDHEVGTLKPVHEEWSSGRGECGT--PHWGAVHRGGLLHLEDSSKRNSTVV 264
           SF   +L  PD  + T    H+ +   R + G   PH+ AV  G  +HLE+  K N  V+
Sbjct: 260 SFDEKYLSVPDEVLVTSMKEHQRYFDVRNDQGLLMPHFIAVRNGDNVHLENVIKGNEKVL 319

Query: 263 VKEPE 249
           +   E
Sbjct: 320 IARLE 324


>sp|A4SJ26|RUVB_AERS4 Holliday junction ATP-dependent DNA helicase
           ruvB OS=Aeromonas salmonicida (strain A449) GN=ruvB PE=3
           SV=1
          Length = 336

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 16/52 (30%), Positives = 30/52 (57%)
 Frame = -2

Query: 176 MLDRSKRPKVESKLLQKRPVCKVFLLALEAPVRKAREEYDQIMLAGKAALGE 21
           ++DR+ RPK+ +    + PVC+   + +EA  R+  E  D +++ G   LG+
Sbjct: 18  IIDRAIRPKMLADYTGQDPVCEQMEIFIEA-ARQRGEALDHLLIFGPPGLGK 68


>sp|Q9DA32|SPA4L_MOUSE Sperm-associated antigen 4-like protein
           OS=Mus musculus GN=Spag4l PE=2 SV=1
          Length = 348

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +1

Query: 40  PANIIW-SYSSRALRTGASKANKNTLHTGLFCKSLLSTLGL 159
           PAN+ W +Y +  LRT   +   NT    LFC+ ++  +GL
Sbjct: 40  PANMTWLTYLACFLRTQTQQVFLNTCRCKLFCQKVMEKMGL 80


>sp|Q9RLV9|PHLC_LISIV Sphingomyelinase C OS=Listeria ivanovii
           GN=smcL PE=1 SV=1
          Length = 335

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 19/60 (31%), Positives = 28/60 (46%)
 Frame = -2

Query: 338 PHWGAVHRGGLLHLEDSSKRNSTVVVKEPEMGLSIGSDYSNPLKKQVSSPPATCMLDRSK 159
           P+WG +HR  L+   D  K N  V++ E     S      N L++    P  T ++ RSK
Sbjct: 61  PNWGQMHRADLIAQADYMKNNDVVILNE-AFDTSASHRLLNNLREMY--PHQTPVIGRSK 117


>sp|Q9GSX9|RIC8_CAEEL Synembryn OS=Caenorhabditis elegans GN=ric-8
           PE=1 SV=1
          Length = 566

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
 Frame = +3

Query: 48  HNLVILFSCLTNRSF*SQQ---KHFAHRPFL*KLAFHLGPFRTIKHTCCRRT*YLFFEWV 218
           H L+    CL N  F SQ+   + +A+      L F LG F   +    R+T  +  +W+
Sbjct: 108 HTLMEAQKCLINTLFHSQRMRDRFYANPKTGENLQFFLGEFEENR----RKTSSI--DWI 161

Query: 219 TVIRPNRKSHFWLFHH 266
            ++ P + +  W F+H
Sbjct: 162 RLLNPVQAAEIWYFYH 177


>sp|P52841|SUHB_CAVPO 3-beta-hydroxysteroid sulfotransferase
           OS=Cavia porcellus GN=STD2 PE=1 SV=2
          Length = 287

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = -3

Query: 226 ITVTHSKNKYQVLLQHVCLIVRKG-PRWKAS 137
           ITVT+ K+    L++ VCLI+ KG P+W  S
Sbjct: 38  ITVTYPKSGTNWLIEIVCLILSKGDPKWVQS 68


>sp|Q8BGZ2|F168A_MOUSE UPF0541 protein FAM168A OS=Mus musculus
           GN=Fam168a PE=2 SV=1
          Length = 244

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 1/87 (1%)
 Frame = -2

Query: 443 SDSQSFSPSFLPDHEVGTLKPVHEEWSSGRGECGTPHWGAVHRGGLLHLE-DSSKRNSTV 267
           ++S S++P F   H       + + W      CGT         G  HL  D+   N T 
Sbjct: 43  TNSPSYAPEFQFLHSAYATLLMKQAWPQNSSSCGTE--------GTFHLPVDTGTENRTY 94

Query: 266 VVKEPEMGLSIGSDYSNPLKKQVSSPP 186
                    + G+ Y  P  +  ++PP
Sbjct: 95  QASSAAFRYTAGTPYKVPPTQSNTAPP 121
tr_hit_id Q2GVX4
Definition tr|Q2GVX4|Q2GVX4_CHAGB Putative uncharacterized protein OS=Chaetomium globosum
Align length 90
Score (bit) 35.8
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917417|Adiantum capillus-veneris mRNA, clone:
YMU001_000100_E10.
         (489 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q2GVX4|Q2GVX4_CHAGB Putative uncharacterized protein OS=Chaet...    36   1.1  
tr|A6RWE1|A6RWE1_BOTFB Predicted protein OS=Botryotinia fuckelia...    35   1.4  
tr|Q0PZI0|Q0PZI0_9BASI DNA-directed RNA polymerase (Fragment) OS...    35   1.4  
tr|Q231A2|Q231A2_TETTH Protein kinase domain containing protein ...    35   1.9  
tr|B4LNR5|B4LNR5_DROVI GJ21321 OS=Drosophila virilis GN=GJ21321 ...    34   3.2  
tr|A1DMI5|A1DMI5_NEOFI Smr domain protein OS=Neosartorya fischer...    34   3.2  
tr|Q4WJ74|Q4WJ74_ASPFU Putative uncharacterized protein OS=Asper...    33   5.5  
tr|B0XPR9|B0XPR9_ASPFC Putative uncharacterized protein OS=Asper...    33   5.5  
tr|A1D3S8|A1D3S8_NEOFI Putative uncharacterized protein OS=Neosa...    33   5.5  
tr|A4QRB2|A4QRB2_MAGGR Putative uncharacterized protein OS=Magna...    33   5.5  
tr|B3RHV1|B3RHV1_YEAS1 Regulatory protein SIR3 OS=Saccharomyces ...    33   7.2  
tr|Q018R1|Q018R1_OSTTA Haemagluttinin motif:Hep_Hag (ISS) OS=Ost...    33   9.3  
tr|B1XKT4|B1XKT4_SYNP2 Putative uncharacterized protein OS=Synec...    33   9.3  
tr|Q9XS92|Q9XS92_TRIVU Prolactin receptor OS=Trichosurus vulpecu...    33   9.3  

>tr|Q2GVX4|Q2GVX4_CHAGB Putative uncharacterized protein OS=Chaetomium
            globosum GN=CHGG_07880 PE=4 SV=1
          Length = 1625

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 23/90 (25%), Positives = 39/90 (43%)
 Frame = -2

Query: 422  PSFLPDHEVGTLKPVHEEWSSGRGECGTPHWGAVHRGGLLHLEDSSKRNSTVVVKEPEMG 243
            P    D  +  L   H +W   R + G+ H G V  G L     ++  +    V  P+  
Sbjct: 910  PEARNDARIANLPDAHFQWIFSRPQVGS-HSGRVGSGCLGQRLFAAAASGPAAVVVPQHQ 968

Query: 242  LSIGSDYSNPLKKQVSSPPATCMLDRSKRP 153
             +  ++ SNPLK+Q ++P   C+     +P
Sbjct: 969  TTNNNNPSNPLKRQPATPTQKCLQKEPPQP 998


>tr|A6RWE1|A6RWE1_BOTFB Predicted protein OS=Botryotinia fuckeliana
           (strain B05.10) GN=BC1G_03985 PE=4 SV=1
          Length = 1073

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 15/91 (16%)
 Frame = +1

Query: 229 DPIESPISGSFTTTVELRLLE------------SSKCSSPPRWTAPQCGVPHSPLPELH- 369
           +P+E P  G  TT V+L  L+            + K S+P     P   VP+   PE   
Sbjct: 468 NPVEEP-EGEKTTPVDLTNLDIDTGFSDHSSSPTKKVSAPKPSVKPYIAVPYPDTPETKP 526

Query: 370 --SS*TGFKVPTSWSGKKDGENDWESESFTS 456
             +  TGFKVP+S S      +  +S S TS
Sbjct: 527 KPTPRTGFKVPSSSSSSSTTNSSTKSVSLTS 557


>tr|Q0PZI0|Q0PZI0_9BASI DNA-directed RNA polymerase (Fragment)
           OS=Exobasidium rhododendri GN=rpb2 PE=3 SV=1
          Length = 693

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
 Frame = -2

Query: 422 PSFLPDHEVGTL--KPVHEEWSSGRGEC-GTPH-WGAVHRGGLLHLEDSSKRNSTVVVKE 255
           P F+ D E  TL  KP H +W   + +  GTP+ WG + R GL+ L D+ +  + ++   
Sbjct: 235 PLFIVDPEDKTLYVKPKHVDWVVNQEKPDGTPYGWGQLVRDGLIELLDAEEEETVMICMS 294

Query: 254 PE 249
           P+
Sbjct: 295 PQ 296


>tr|Q231A2|Q231A2_TETTH Protein kinase domain containing protein
            OS=Tetrahymena thermophila SB210 GN=TTHERM_00433560 PE=4
            SV=1
          Length = 1474

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 18/65 (27%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
 Frame = -2

Query: 302  HLEDSSKRNSTVVVKEPEMGLSIGSDYSNPLKKQVSSPPATCMLDRS-KRPKVESKLLQK 126
            ++ ++ K+N  VV+K+PE   + G  + + +KKQ  +   T  +++  K PK+  +++ +
Sbjct: 1237 NIHNTDKQNINVVIKKPENIDNNGQSFQSEMKKQDQTNNQTPSINKEVKEPKI--RVISE 1294

Query: 125  RPVCK 111
             P+CK
Sbjct: 1295 SPMCK 1299


>tr|B4LNR5|B4LNR5_DROVI GJ21321 OS=Drosophila virilis GN=GJ21321
           PE=4 SV=1
          Length = 178

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 30/105 (28%), Positives = 40/105 (38%), Gaps = 7/105 (6%)
 Frame = -2

Query: 374 EEWSSGRGECGTPHWGAV-------HRGGLLHLEDSSKRNSTVVVKEPEMGLSIGSDYSN 216
           E W S R  C    + A        H G     ED S  + TV+  E         D+  
Sbjct: 40  EHWRSKRFPCPCCAYAAATRAHLKRHMGNKHPTEDISNHDLTVLAYE---------DFET 90

Query: 215 PLKKQVSSPPATCMLDRSKRPKVESKLLQKRPVCKVFLLALEAPV 81
           P +KQ+   P   M + ++ PK   +  QK P      L LE PV
Sbjct: 91  PAEKQMKPSPTEQMKEPTQEPKNTPQSQQKEPP-----LVLEGPV 130


>tr|A1DMI5|A1DMI5_NEOFI Smr domain protein OS=Neosartorya fischeri
           (strain ATCC 1020 / DSM 3700 / NRRL 181) GN=NFIA_053520
           PE=4 SV=1
          Length = 554

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 35/115 (30%), Positives = 49/115 (42%), Gaps = 12/115 (10%)
 Frame = -2

Query: 314 GGLLHLEDSSKRNSTVVVKEPEMGL---SIGSDYSNPLKKQVSSPPATCMLDRSKRPKVE 144
           GGLL++     RNST    E  + +      S  SN +K   + PP     D  KRP VE
Sbjct: 330 GGLLNIT----RNSTSAAGELAVAMLTRPAASSVSNLIKITTAPPPLDLDDDEPKRPSVE 385

Query: 143 SKLLQ-----KRPVCKVFLLALEAPVRKAREEY----DQIMLAGKAALGEGVDED 6
           S++L+     +   C  F+ + EA   KA   Y       ++ G AA    V  D
Sbjct: 386 SRVLRHHGTARVTACDHFVASAEA-FHKASAAYRRGKSDKLMGGAAAYYSSVGRD 439


>tr|Q4WJ74|Q4WJ74_ASPFU Putative uncharacterized protein
           OS=Aspergillus fumigatus GN=AFUA_1G06970 PE=4 SV=1
          Length = 603

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 26/87 (29%), Positives = 37/87 (42%)
 Frame = +1

Query: 7   SSSTPSPKAAFPANIIWSYSSRALRTGASKANKNTLHTGLFCKSLLSTLGLFERSSIHVA 186
           +S TP P  A PA   W Y   +  T A  A ++++ T     ++L TLG   R    V+
Sbjct: 458 ASQTPQPIRATPATAGWPYPQASATTQAPSAMESSMMT-----AVLETLGKLNRHLDAVS 512

Query: 187 GGLDTCFLSGLL*SDPIESPISGSFTT 267
                        +DP  SP+  S TT
Sbjct: 513 -------------ADPRSSPLVASLTT 526


>tr|B0XPR9|B0XPR9_ASPFC Putative uncharacterized protein
           OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 /
           FGSC A1163) GN=AFUB_007350 PE=4 SV=1
          Length = 603

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 26/87 (29%), Positives = 37/87 (42%)
 Frame = +1

Query: 7   SSSTPSPKAAFPANIIWSYSSRALRTGASKANKNTLHTGLFCKSLLSTLGLFERSSIHVA 186
           +S TP P  A PA   W Y   +  T A  A ++++ T     ++L TLG   R    V+
Sbjct: 458 ASQTPQPIRATPATAGWPYPQASATTQAPSAMESSMMT-----AVLETLGKLNRHLDAVS 512

Query: 187 GGLDTCFLSGLL*SDPIESPISGSFTT 267
                        +DP  SP+  S TT
Sbjct: 513 -------------ADPRSSPLVASLTT 526


>tr|A1D3S8|A1D3S8_NEOFI Putative uncharacterized protein
           OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
           NRRL 181) GN=NFIA_017720 PE=4 SV=1
          Length = 531

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 26/87 (29%), Positives = 37/87 (42%)
 Frame = +1

Query: 7   SSSTPSPKAAFPANIIWSYSSRALRTGASKANKNTLHTGLFCKSLLSTLGLFERSSIHVA 186
           +S TP P  A PA   WSY   +  T A  A ++++ T     ++L TLG   R    V+
Sbjct: 386 ASQTPQPNRATPAAAGWSYPQASATTHAPSALESSMMT-----AVLETLGKLNRHLDAVS 440

Query: 187 GGLDTCFLSGLL*SDPIESPISGSFTT 267
                        +DP  SP+  S  T
Sbjct: 441 -------------ADPRSSPLVASLAT 454


>tr|A4QRB2|A4QRB2_MAGGR Putative uncharacterized protein
            OS=Magnaporthe grisea GN=MGG_03629 PE=4 SV=1
          Length = 1060

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 18/71 (25%), Positives = 36/71 (50%)
 Frame = -2

Query: 296  EDSSKRNSTVVVKEPEMGLSIGSDYSNPLKKQVSSPPATCMLDRSKRPKVESKLLQKRPV 117
            ++S+     + V+ P+  L+ G+ Y    +K V  PP+   + +SK PK+ +++    P+
Sbjct: 848  DESTVPRIAIAVEHPQ--LATGAAYLREARKSVLMPPSLISMPQSKPPKMPARISLAPPI 905

Query: 116  CKVFLLALEAP 84
              V   A + P
Sbjct: 906  SMVVAKAPKTP 916