BP917372
Clone id YMU001_000100_A07
Library
Length 540
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000100_A07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TGATGTCATTTTCAATGACATCCAAAAATGGCTAGCAGAACATGTGGAAAAATGCAATAA
AGACAGCTGAGAGCAGGACCTGTATGCAGGATGTTGCACATTACTTGGTTGCTTTGTGGG
GATTGAGGTTTTGTGCTGCTTCAGCCGGCACTTCTTTTTGAGTACCTTTATCCTAGTCAA
TTCTTGCAAACAAAGATTGGAGACGGCTGAGAACATGTGGGTGAGTTTGGCTGTTCGTGA
GGAAGAAGAGACAGTCGATTGGACTGTGTAGATGTCTTCACAGACCTGATTCTTTCCATT
ACCCATCAATTGTTGCTTTGGGTATTTACAAAGCCCCTTGTCATGAACTGTCAATCAGCC
TTATTATGGCGCATTCTGGCTGGTACAGGTTAAGTCCATTTCTGTTGATTGTTAGCAATA
AAGCTTATGGTACGATAATCTTAAGAAAGGTCTATCTTTAGGTAGATCTTTCTTGTGCTT
ACTGAGAATGTCAGTATTGTTATGGCAATGAATTTTTTTGATGATGATCTAAAGAAAGGT
■■Homology search results ■■ -
sp_hit_id Q1R2J0
Definition sp|Q1R2J0|IRAD_ECOUT Anti-adapter protein iraD OS=Escherichia coli (strain UTI89 / UPEC)
Align length 36
Score (bit) 30.4
E-value 5.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917372|Adiantum capillus-veneris mRNA, clone:
YMU001_000100_A07.
(527 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q1R2J0|IRAD_ECOUT Anti-adapter protein iraD OS=Escherichia co... 30 5.4
sp|Q8FAA2|IRAD_ECOL6 Anti-adapter protein iraD OS=Escherichia co... 30 5.4
sp|A1AJJ1|IRAD_ECOK1 Anti-adapter protein iraD OS=Escherichia co... 30 5.4
sp|Q71QI2|VSP2_TRIST Venom serine protease CL2 OS=Trimeresurus s... 30 9.2
sp|P98164|LRP2_HUMAN Low-density lipoprotein receptor-related pr... 30 9.2
sp|Q6F3F9|GP126_MOUSE Probable G-protein coupled receptor 126 OS... 30 9.2

>sp|Q1R2J0|IRAD_ECOUT Anti-adapter protein iraD OS=Escherichia coli
(strain UTI89 / UPEC) GN=iraD PE=3 SV=1
Length = 127

Score = 30.4 bits (67), Expect = 5.4
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2

Query: 254 CRCLHRPDSFHYPSIVAL--GIYKAPCHELSISLIM 355
CR L FH P I AL + +A CHEL+ISL M
Sbjct: 66 CRQLRSALLFHEPRIAALQVNLKEAYCHELAISLEM 101


>sp|Q8FAA2|IRAD_ECOL6 Anti-adapter protein iraD OS=Escherichia coli
O6 GN=iraD PE=3 SV=2
Length = 127

Score = 30.4 bits (67), Expect = 5.4
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2

Query: 254 CRCLHRPDSFHYPSIVAL--GIYKAPCHELSISLIM 355
CR L FH P I AL + +A CHEL+ISL M
Sbjct: 66 CRQLRSALLFHEPRIAALQVNLKEAYCHELAISLEM 101


>sp|A1AJJ1|IRAD_ECOK1 Anti-adapter protein iraD OS=Escherichia coli
O1:K1 / APEC GN=iraD PE=3 SV=2
Length = 127

Score = 30.4 bits (67), Expect = 5.4
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2

Query: 254 CRCLHRPDSFHYPSIVAL--GIYKAPCHELSISLIM 355
CR L FH P I AL + +A CHEL+ISL M
Sbjct: 66 CRQLRSALLFHEPRIAALQVNLKEAYCHELAISLEM 101


>sp|Q71QI2|VSP2_TRIST Venom serine protease CL2 OS=Trimeresurus
stejnegeri PE=2 SV=1
Length = 258

Score = 29.6 bits (65), Expect = 9.2
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -1

Query: 137 CRLKQHKTSIPTKQPSNVQHPAYRSCSQLSLLHFSTCSASHFWM 6
CR+ +IPT++ HP C+ + L H+S C A + M
Sbjct: 142 CRIMGWGKTIPTQET----HPDVPHCANIKLFHYSLCRAVYVGM 181


>sp|P98164|LRP2_HUMAN Low-density lipoprotein receptor-related protein
2 OS=Homo sapiens GN=LRP2 PE=1 SV=3
Length = 4655

Score = 29.6 bits (65), Expect = 9.2
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
Frame = -1

Query: 107 PTKQPSNVQHPAYRSCSQLSLL-----HFSTCSASHFW 9
P+KQP++V A+ CS L LL HF +C W
Sbjct: 1694 PSKQPNSVNPCAFSRCSHLCLLSSQGPHFYSCVCPSGW 1731


>sp|Q6F3F9|GP126_MOUSE Probable G-protein coupled receptor 126
OS=Mus musculus GN=Gpr126 PE=1 SV=1
Length = 1165

Score = 29.6 bits (65), Expect = 9.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2

Query: 245 IGLCRCLHRPDSFHYPSIVALGIYKAPC 328
+G+C L PD F +P+ + +YK PC
Sbjct: 495 LGMCSALEDPDGFSWPATLP-SVYKQPC 521


tr_hit_id Q3M920
Definition tr|Q3M920|Q3M920_ANAVT Polysaccharide pyruvyl transferase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937)
Align length 39
Score (bit) 33.1
E-value 8.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917372|Adiantum capillus-veneris mRNA, clone:
YMU001_000100_A07.
(527 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q3M920|Q3M920_ANAVT Polysaccharide pyruvyl transferase OS=Ana... 33 8.8

>tr|Q3M920|Q3M920_ANAVT Polysaccharide pyruvyl transferase
OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937)
GN=Ava_2905 PE=4 SV=1
Length = 367

Score = 33.1 bits (74), Expect = 8.8
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +2

Query: 311 IYKAPCHELSISLIMAHSGWYRLSPFLLIVSNKAYGTII 427
+Y+ H+LS SL+ HSG Y+L L+++N+ +G II
Sbjct: 273 VYQPSIHQLSWSLM--HSGVYQLKQHRLVITNRLHGHII 309