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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917360
Clone id YMU001_000099_H03
Library
Length 153
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000099_H03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AGATTCGTGATTCAAACAGAGCTATGCTGCTTGCTGCTGCAGCTGAACATCGGTGTAGCC
TATTGGACCTTGGGATTGCGAAAGATTGCAAGGATGATCTAGAAAGACTGTTAGAAAAGG
CCCTTGCTGCTGGCACACGATATCCCACTGAGC
■■Homology search results ■■ -
sp_hit_id Q39054
Definition sp|Q39054|CNX1_ARATH Molybdopterin biosynthesis protein CNX1 OS=Arabidopsis thaliana
Align length 44
Score (bit) 52.8
E-value 5.0e-07
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917360|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_H03.
         (153 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q39054|CNX1_ARATH Molybdopterin biosynthesis protein CNX1 OS=...    53   5e-07
sp|Q03555|GEPH_RAT Gephyrin OS=Rattus norvegicus GN=Gphn PE=1 SV=3     37   0.031
sp|Q8BUV3|GEPH_MOUSE Gephyrin OS=Mus musculus GN=Gphn PE=1 SV=1        37   0.031
sp|Q9NQX3|GEPH_HUMAN Gephyrin OS=Homo sapiens GN=GPHN PE=1 SV=1        37   0.031
sp|Q9PW38|GEPH_CHICK Gephyrin OS=Gallus gallus GN=GPHN PE=1 SV=1       34   0.20 

>sp|Q39054|CNX1_ARATH Molybdopterin biosynthesis protein CNX1
           OS=Arabidopsis thaliana GN=CNX1 PE=1 SV=2
          Length = 670

 Score = 52.8 bits (125), Expect = 5e-07
 Identities = 22/44 (50%), Positives = 37/44 (84%)
 Frame = +3

Query: 3   IRDSNRAMLLAAAAEHRCSLLDLGIAKDCKDDLERLLEKALAAG 134
           IRDSNRAML+AA  + +C ++DLGI +D + +LE++L++A+++G
Sbjct: 215 IRDSNRAMLVAAVMQQQCKVVDLGIVRDDRKELEKVLDEAVSSG 258


>sp|Q03555|GEPH_RAT Gephyrin OS=Rattus norvegicus GN=Gphn PE=1 SV=3
          Length = 768

 Score = 37.0 bits (84), Expect = 0.031
 Identities = 19/42 (45%), Positives = 25/42 (59%)
 Frame = +3

Query: 3   IRDSNRAMLLAAAAEHRCSLLDLGIAKDCKDDLERLLEKALA 128
           IRDSNR+ LLA   EH    ++LGI  D  DDL   L + ++
Sbjct: 554 IRDSNRSTLLATIQEHGYPTINLGIVGDNPDDLLNALNEGIS 595


>sp|Q8BUV3|GEPH_MOUSE Gephyrin OS=Mus musculus GN=Gphn PE=1 SV=1
          Length = 769

 Score = 37.0 bits (84), Expect = 0.031
 Identities = 19/42 (45%), Positives = 25/42 (59%)
 Frame = +3

Query: 3   IRDSNRAMLLAAAAEHRCSLLDLGIAKDCKDDLERLLEKALA 128
           IRDSNR+ LLA   EH    ++LGI  D  DDL   L + ++
Sbjct: 555 IRDSNRSTLLATIQEHGYPTINLGIVGDNPDDLLNALNEGIS 596


>sp|Q9NQX3|GEPH_HUMAN Gephyrin OS=Homo sapiens GN=GPHN PE=1 SV=1
          Length = 736

 Score = 37.0 bits (84), Expect = 0.031
 Identities = 19/42 (45%), Positives = 25/42 (59%)
 Frame = +3

Query: 3   IRDSNRAMLLAAAAEHRCSLLDLGIAKDCKDDLERLLEKALA 128
           IRDSNR+ LLA   EH    ++LGI  D  DDL   L + ++
Sbjct: 522 IRDSNRSTLLATIQEHGYPTINLGIVGDNPDDLLNALNEGIS 563


>sp|Q9PW38|GEPH_CHICK Gephyrin OS=Gallus gallus GN=GPHN PE=1 SV=1
          Length = 736

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 18/42 (42%), Positives = 24/42 (57%)
 Frame = +3

Query: 3   IRDSNRAMLLAAAAEHRCSLLDLGIAKDCKDDLERLLEKALA 128
           IRDSNR+ LLA    H    ++LGI  D  DDL   L + ++
Sbjct: 522 IRDSNRSTLLATIQAHGYPTINLGIVGDNPDDLLNALNERIS 563
tr_hit_id B8LQ00
Definition tr|B8LQ00|B8LQ00_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 44
Score (bit) 60.5
E-value 4.0e-08
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917360|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_H03.
         (153 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8LQ00|B8LQ00_PICSI Putative uncharacterized protein OS=Picea...    60   4e-08
tr|A7PG87|A7PG87_VITVI Chromosome chr6 scaffold_15, whole genome...    58   2e-07
tr|A5BE21|A5BE21_VITVI Putative uncharacterized protein OS=Vitis...    57   5e-07
tr|Q7XM29|Q7XM29_ORYSJ OSJNBa0084K01.2 protein (OSJNBa0015K02.22...    55   2e-06
tr|Q0J9C4|Q0J9C4_ORYSJ Os04g0661600 protein (Fragment) OS=Oryza ...    55   2e-06
tr|Q01JK7|Q01JK7_ORYSA H0112G12.13 protein OS=Oryza sativa GN=H0...    55   2e-06
tr|B8AVX9|B8AVX9_ORYSI Putative uncharacterized protein OS=Oryza...    55   2e-06
tr|A3AYA6|A3AYA6_ORYSJ Putative uncharacterized protein OS=Oryza...    55   2e-06
tr|A9SVY0|A9SVY0_PHYPA Predicted protein OS=Physcomitrella paten...    53   7e-06
tr|Q9M4Q0|Q9M4Q0_HORVU Molybdenum cofactor biosynthesis protein ...    51   3e-05
tr|Q309F9|Q309F9_MAIZE Molybdenum cofactor biosynthesis protein ...    49   1e-04
tr|Q2LGZ4|Q2LGZ4_CHLRE Molybdenum cofactor biosynthesis protein ...    43   0.007
tr|A8HZX4|A8HZX4_CHLRE Molybdopterin biosynthesis protein OS=Chl...    43   0.007
tr|B6L3I4|B6L3I4_BRAFL Putative uncharacterized protein (Fragmen...    40   0.045
tr|B6L3H5|B6L3H5_BRAFL Putative uncharacterized protein (Fragmen...    40   0.045
tr|A7SKS5|A7SKS5_NEMVE Predicted protein OS=Nematostella vectens...    40   0.059
tr|A4JCN5|A4JCN5_BURVG Molybdopterin molybdochelatase OS=Burkhol...    39   0.10 
tr|Q0UHQ2|Q0UHQ2_PHANO Putative uncharacterized protein OS=Phaeo...    38   0.22 
tr|A2WBL3|A2WBL3_9BURK Molybdopterin biosynthesis enzyme OS=Burk...    38   0.29 
tr|Q1EAZ9|Q1EAZ9_COCIM Putative uncharacterized protein OS=Cocci...    38   0.29 
tr|B2WGC2|B2WGC2_PYRTR Gephyrin OS=Pyrenophora tritici-repentis ...    37   0.38 
tr|Q6GQZ6|Q6GQZ6_XENLA MGC83148 protein OS=Xenopus laevis GN=MGC...    37   0.50 
tr|Q6DF77|Q6DF77_XENLA Gphn protein OS=Xenopus laevis GN=gphn PE...    37   0.50 
tr|B3GS92|B3GS92_RAT Gephyrin isoform OS=Rattus norvegicus PE=2 ...    37   0.50 
tr|A0JNY3|A0JNY3_MOUSE Gphn protein OS=Mus musculus GN=Gphn PE=2...    37   0.50 
tr|Q96KU4|Q96KU4_HUMAN Gephyrin OS=Homo sapiens GN=GPHRYN PE=2 SV=1    37   0.50 
tr|B7Z4J7|B7Z4J7_HUMAN cDNA FLJ54094, highly similar to Gephyrin...    37   0.50 
tr|B7Z374|B7Z374_HUMAN cDNA FLJ54093, highly similar to Gephyrin...    37   0.50 
tr|B7Z2B5|B7Z2B5_HUMAN cDNA FLJ54713, highly similar to Gephyrin...    37   0.50 
tr|B2RDJ7|B2RDJ7_HUMAN cDNA, FLJ96642, highly similar to Homo sa...    37   0.50 

>tr|B8LQ00|B8LQ00_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 677

 Score = 60.5 bits (145), Expect = 4e-08
 Identities = 28/44 (63%), Positives = 38/44 (86%)
 Frame = +3

Query: 3   IRDSNRAMLLAAAAEHRCSLLDLGIAKDCKDDLERLLEKALAAG 134
           IRD+NRAMLLAAA + +C +LDLGIA D K++LE +L+KA++AG
Sbjct: 218 IRDTNRAMLLAAATQQQCKILDLGIACDDKEELEAMLDKAISAG 261


>tr|A7PG87|A7PG87_VITVI Chromosome chr6 scaffold_15, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00017434001
           PE=4 SV=1
          Length = 649

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 26/44 (59%), Positives = 36/44 (81%)
 Frame = +3

Query: 3   IRDSNRAMLLAAAAEHRCSLLDLGIAKDCKDDLERLLEKALAAG 134
           IRDSNRAMLLAAA +  C +LDLGIA D +++++R+L+ A +AG
Sbjct: 206 IRDSNRAMLLAAAVQQHCKILDLGIAHDDEEEIQRILDSAFSAG 249


>tr|A5BE21|A5BE21_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_026358 PE=4 SV=1
          Length = 518

 Score = 57.0 bits (136), Expect = 5e-07
 Identities = 26/44 (59%), Positives = 35/44 (79%)
 Frame = +3

Query: 3   IRDSNRAMLLAAAAEHRCSLLDLGIAKDCKDDLERLLEKALAAG 134
           IRDSNRAMLLAAA +  C  LDLGIA D +++++R+L+ A +AG
Sbjct: 64  IRDSNRAMLLAAAVQQHCKXLDLGIAHDDEEEIQRILDSAFSAG 107


>tr|Q7XM29|Q7XM29_ORYSJ OSJNBa0084K01.2 protein (OSJNBa0015K02.22
           protein) OS=Oryza sativa subsp. japonica
           GN=OSJNBa0084K01.2 PE=4 SV=1
          Length = 661

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 24/43 (55%), Positives = 36/43 (83%)
 Frame = +3

Query: 3   IRDSNRAMLLAAAAEHRCSLLDLGIAKDCKDDLERLLEKALAA 131
           IRDSNRAML+AAA +H+C ++DLGIAKD ++ L+  ++ AL++
Sbjct: 204 IRDSNRAMLIAAAIQHKCKVVDLGIAKDTEESLKEHMDAALSS 246


>tr|Q0J9C4|Q0J9C4_ORYSJ Os04g0661600 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os04g0661600 PE=4 SV=1
          Length = 468

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 24/43 (55%), Positives = 36/43 (83%)
 Frame = +3

Query: 3   IRDSNRAMLLAAAAEHRCSLLDLGIAKDCKDDLERLLEKALAA 131
           IRDSNRAML+AAA +H+C ++DLGIAKD ++ L+  ++ AL++
Sbjct: 11  IRDSNRAMLIAAAIQHKCKVVDLGIAKDTEESLKEHMDAALSS 53


>tr|Q01JK7|Q01JK7_ORYSA H0112G12.13 protein OS=Oryza sativa
           GN=H0112G12.13 PE=4 SV=1
          Length = 661

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 24/43 (55%), Positives = 36/43 (83%)
 Frame = +3

Query: 3   IRDSNRAMLLAAAAEHRCSLLDLGIAKDCKDDLERLLEKALAA 131
           IRDSNRAML+AAA +H+C ++DLGIAKD ++ L+  ++ AL++
Sbjct: 204 IRDSNRAMLIAAAIQHKCKVVDLGIAKDTEESLKEHMDAALSS 246


>tr|B8AVX9|B8AVX9_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_17781 PE=4 SV=1
          Length = 661

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 24/43 (55%), Positives = 36/43 (83%)
 Frame = +3

Query: 3   IRDSNRAMLLAAAAEHRCSLLDLGIAKDCKDDLERLLEKALAA 131
           IRDSNRAML+AAA +H+C ++DLGIAKD ++ L+  ++ AL++
Sbjct: 204 IRDSNRAMLIAAAIQHKCKVVDLGIAKDTEESLKEHMDAALSS 246


>tr|A3AYA6|A3AYA6_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_015778 PE=4 SV=1
          Length = 533

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 24/43 (55%), Positives = 36/43 (83%)
 Frame = +3

Query: 3   IRDSNRAMLLAAAAEHRCSLLDLGIAKDCKDDLERLLEKALAA 131
           IRDSNRAML+AAA +H+C ++DLGIAKD ++ L+  ++ AL++
Sbjct: 147 IRDSNRAMLIAAAIQHKCKVVDLGIAKDTEESLKEHMDAALSS 189


>tr|A9SVY0|A9SVY0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_136145 PE=4 SV=1
          Length = 677

 Score = 53.1 bits (126), Expect = 7e-06
 Identities = 24/43 (55%), Positives = 34/43 (79%)
 Frame = +3

Query: 3   IRDSNRAMLLAAAAEHRCSLLDLGIAKDCKDDLERLLEKALAA 131
           IRDSNRAMLLAA  EH C +++LGI +D + ++  +L+KALA+
Sbjct: 214 IRDSNRAMLLAACKEHHCEVINLGIIRDVEAEVNDILDKALAS 256


>tr|Q9M4Q0|Q9M4Q0_HORVU Molybdenum cofactor biosynthesis protein
           Cnx1 OS=Hordeum vulgare GN=cnx1 PE=2 SV=1
          Length = 659

 Score = 50.8 bits (120), Expect = 3e-05
 Identities = 24/41 (58%), Positives = 32/41 (78%)
 Frame = +3

Query: 3   IRDSNRAMLLAAAAEHRCSLLDLGIAKDCKDDLERLLEKAL 125
           IRDSNRAMLLAAA + +C ++DLGIAKD ++ L   ++ AL
Sbjct: 202 IRDSNRAMLLAAAIQQKCKVVDLGIAKDTEESLMEHMDAAL 242