BP917305
Clone id YMU001_000099_B02
Library
Length 509
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000099_B02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GGGGAACTATTACTGGATCTGGTCTCAGCTCCAAAGATGACACCACTCTTCTGCAGCCGA
GTGATATCATACACAATCGTCGCAACTCTATACACATCTACTCCTGAGTTTGTCAAATTC
ACTGCACTCCTGCCACTTCTTAGAAGAATCTTTATGACGCTTGTCTCAACTTTACTCAAA
TAGTTTCGCTGACACATAACTGAGAGCTCACTCATGAGCTGCCGCATCTCCAGCAGTATA
CTTAACAAACCTTCAGTTTCTTGCCCAAAGGTCTTGAACCTCTCCTTAATTTGACAGGTC
TTCATGTGAAGAATGCTCAGCCTTGCCACATCCCCACCTGCTGAGGTAGCAGCACCTGCG
CCCCCCAGTGCCAATCCAGCCACTGCAAGTGGGGCTGCAAGGCCAAATGTATAAAAGGAC
GCAACTATTCCTGCACCAGTCAACACTCCCCCAGCTATAGCAGCACTTCCACCTGCAAAA
GATCGCAGCGGATGTACATGAAGACTTGT
■■Homology search results ■■ -
sp_hit_id A8MXZ3
Definition sp|A8MXZ3|KR923_HUMAN Putative keratin-associated protein 9-2-like 3 OS=Homo sapiens
Align length 37
Score (bit) 33.9
E-value 0.46
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917305|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_B02.
(509 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A8MXZ3|KR923_HUMAN Putative keratin-associated protein 9-2-li... 34 0.46
sp|P98167|SSPO_BOVIN SCO-spondin OS=Bos taurus GN=SSPO PE=2 SV=2 33 0.78
sp|Q9BYQ2|KRA94_HUMAN Keratin-associated protein 9-4 OS=Homo sap... 31 2.9
sp|Q54WB6|PSMG1_DICDI Proteasome assembly chaperone 1 OS=Dictyos... 31 3.9
sp|Q9BYQ0|KRA98_HUMAN Keratin-associated protein 9-8 OS=Homo sap... 30 5.0
sp|O00237|RN103_HUMAN RING finger protein 103 OS=Homo sapiens GN... 30 8.6
sp|Q9I4S5|PDXH_PSEAE Pyridoxine/pyridoxamine 5'-phosphate oxidas... 30 8.6
sp|Q02IL5|PDXH_PSEAB Pyridoxine/pyridoxamine 5'-phosphate oxidas... 30 8.6
sp|A6V9E9|PDXH_PSEA7 Pyridoxine/pyridoxamine 5'-phosphate oxidas... 30 8.6
sp|Q5Z236|PDXH_NOCFA Pyridoxine/pyridoxamine 5'-phosphate oxidas... 30 8.6
sp|B0BU37|PDXH_ACTPJ Pyridoxine/pyridoxamine 5'-phosphate oxidas... 30 8.6
sp|A3N3U7|PDXH_ACTP2 Pyridoxine/pyridoxamine 5'-phosphate oxidas... 30 8.6
sp|Q9BYR0|KRA47_HUMAN Keratin-associated protein 4-7 OS=Homo sap... 30 8.6
sp|A8MTL4|KR41X_HUMAN Putative keratin-associated protein 4-X OS... 30 8.6

>sp|A8MXZ3|KR923_HUMAN Putative keratin-associated protein 9-2-like
3 OS=Homo sapiens PE=3 SV=1
Length = 250

Score = 33.9 bits (76), Expect = 0.46
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3

Query: 321 PCHIPTC*GSSTCAPQC-QSSHCKWGCKAKCIKGRNY 428
PC PTC GSS C+ C +SS+C C+ C + Y
Sbjct: 189 PCCQPTCGGSSCCSQTCNESSYCLPCCRPTCCQTTCY 225



Score = 32.3 bits (72), Expect = 1.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3

Query: 333 PTC*GSSTCAPQCQSSHCKWGCKAKC 410
PTC GSS C P C + C+ C++ C
Sbjct: 151 PTCCGSSCCQPCCHPTCCQTICRSTC 176


>sp|P98167|SSPO_BOVIN SCO-spondin OS=Bos taurus GN=SSPO PE=2 SV=2
Length = 5146

Score = 33.1 bits (74), Expect = 0.78
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3

Query: 282 LLNLTGLHVKNAQPCHIPTC*GSSTC-APQCQSSHCKW 392
L N TG +PC++P+C C P C++ +C W
Sbjct: 3904 LANCTGGAASQERPCNLPSCTELPLCPGPGCEAGNCSW 3941


>sp|Q9BYQ2|KRA94_HUMAN Keratin-associated protein 9-4 OS=Homo
sapiens GN=KRTAP9-4 PE=2 SV=1
Length = 154

Score = 31.2 bits (69), Expect = 2.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3

Query: 318 QPCHIPTC*GSSTCAPQCQSSHCKWGC 398
QPC PTC ++ C P C +S C+ C
Sbjct: 49 QPCCRPTCCQNTCCQPTCVTSCCQPSC 75


>sp|Q54WB6|PSMG1_DICDI Proteasome assembly chaperone 1
OS=Dictyostelium discoideum GN=psmg1 PE=3 SV=1
Length = 272

Score = 30.8 bits (68), Expect = 3.9
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +3

Query: 45 TLLQPSDIIHNRRNSIHIYS*VCQIHCTPATS*KNLYDACLNFTQIVSLT 194
T L+ S+II N S + +CQ+ PA S NLY++ LN + S T
Sbjct: 184 TPLESSNIIENLSAS---FLTICQVKYIPACSILNLYESHLNIESVQSFT 230


>sp|Q9BYQ0|KRA98_HUMAN Keratin-associated protein 9-8 OS=Homo
sapiens GN=KRTAP9-8 PE=2 SV=1
Length = 159

Score = 30.4 bits (67), Expect = 5.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3

Query: 318 QPCHIPTC*GSSTCAPQCQSSHCKWGC 398
QPC PTC ++ C P C +S C+ C
Sbjct: 44 QPCCRPTCCQNTCCQPICVTSCCQPSC 70


>sp|O00237|RN103_HUMAN RING finger protein 103 OS=Homo sapiens
GN=RNF103 PE=2 SV=1
Length = 685

Score = 29.6 bits (65), Expect = 8.6
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
Frame = -3

Query: 429 NSCVLLYIWPCS----PTCSGWIGTGGRRCCYLSRWGCGKAE--HSSHEDLSN 289
N C+L+ + PC C GGR CC + RW K + ++ H+ LSN
Sbjct: 630 NGCLLMGL-PCGHVFHQNCIVMWLAGGRHCCPVCRWPSYKKKQPYAQHQPLSN 681


>sp|Q9I4S5|PDXH_PSEAE Pyridoxine/pyridoxamine 5'-phosphate oxidase
OS=Pseudomonas aeruginosa GN=pdxH PE=3 SV=1
Length = 215

Score = 29.6 bits (65), Expect = 8.6
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2

Query: 370 HWGAQVLLPQQVGMWQG 320
HWG LLPQ++ WQG
Sbjct: 174 HWGGYRLLPQRIEFWQG 190


>sp|Q02IL5|PDXH_PSEAB Pyridoxine/pyridoxamine 5'-phosphate oxidase
OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=pdxH
PE=3 SV=1
Length = 215

Score = 29.6 bits (65), Expect = 8.6
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2

Query: 370 HWGAQVLLPQQVGMWQG 320
HWG LLPQ++ WQG
Sbjct: 174 HWGGYRLLPQRIEFWQG 190


>sp|A6V9E9|PDXH_PSEA7 Pyridoxine/pyridoxamine 5'-phosphate oxidase
OS=Pseudomonas aeruginosa (strain PA7) GN=pdxH PE=3 SV=1
Length = 215

Score = 29.6 bits (65), Expect = 8.6
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2

Query: 370 HWGAQVLLPQQVGMWQG 320
HWG LLPQ++ WQG
Sbjct: 174 HWGGYRLLPQRIEFWQG 190


>sp|Q5Z236|PDXH_NOCFA Pyridoxine/pyridoxamine 5'-phosphate oxidase
OS=Nocardia farcinica GN=pdxH PE=3 SV=2
Length = 225

Score = 29.6 bits (65), Expect = 8.6
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2

Query: 370 HWGAQVLLPQQVGMWQG 320
HWG +L P+QV WQG
Sbjct: 184 HWGGYLLRPEQVEFWQG 200


tr_hit_id Q9D3H7
Definition tr|Q9D3H7|Q9D3H7_MOUSE Novel member of the keratin associated protein 9 (Krtap9) family OS=Mus musculus
Align length 32
Score (bit) 35.0
E-value 2.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917305|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_B02.
(509 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9D3H7|Q9D3H7_MOUSE Novel member of the keratin associated pr... 35 2.1
tr|Q9D141|Q9D141_MOUSE Novel member of the keratin associated pr... 35 2.1
tr|Q64526|Q64526_MOUSE Keratin associated protein 9-1 OS=Mus mus... 35 2.1
tr|A2A4M2|A2A4M2_MOUSE Novel member of the keratin associated pr... 35 2.1
tr|Q7NPR8|Q7NPR8_CHRVO Putative uncharacterized protein OS=Chrom... 35 2.1
tr|B1EQC6|B1EQC6_9ESCH Sensor protein OS=Escherichia albertii TW... 35 2.1
tr|A2VEC8|A2VEC8_CANFA SCO-spondin OS=Canis familiaris GN=sspo P... 35 2.1
tr|Q8FB08|Q8FB08_ECOL6 Sensor protein OS=Escherichia coli O6 GN=... 34 3.6
tr|Q1R3L7|Q1R3L7_ECOUT Sensor protein OS=Escherichia coli (strai... 34 3.6
tr|Q0T9Z9|Q0T9Z9_ECOL5 Sensor protein OS=Escherichia coli O6:K15... 34 3.6
tr|A1AIP4|A1AIP4_ECOK1 Sensor protein OS=Escherichia coli O1:K1 ... 34 3.6
tr|B8JU58|B8JU58_ECOLX Putative transport sensor protein OS=Esch... 34 3.6
tr|B7UPM3|B7UPM3_ECO27 Predicted sensory histidine kinase in two... 34 3.6
tr|B7N2S0|B7N2S0_ECOLX Putative C4-dicarboxylate transport senso... 34 3.6
tr|B7MJ59|B7MJ59_ECOLX Putative C4-dicarboxylate transport senso... 34 3.6
tr|B3HRT9|B3HRT9_ECOLX Putative transport sensor protein OS=Esch... 34 3.6
tr|B6JXI5|B6JXI5_SCHJP Proteasome component OS=Schizosaccharomyc... 34 3.6
tr|B7LL37|B7LL37_ESCFE Putative C4-dicarboxylate transport senso... 34 4.7
tr|A8JGD5|A8JGD5_CHLRE Predicted protein OS=Chlamydomonas reinha... 34 4.7
tr|A5M8V6|A5M8V6_STRPN Inositol-5-monophosphate dehydrogenase OS... 33 6.1
tr|Q9XSV8|Q9XSV8_BOVIN SCO-spondin (Fragment) OS=Bos taurus GN=s... 33 8.0

>tr|Q9D3H7|Q9D3H7_MOUSE Novel member of the keratin associated
protein 9 (Krtap9) family OS=Mus musculus
GN=OTTMUSG00000002191 PE=2 SV=1
Length = 191

Score = 35.0 bits (79), Expect = 2.1
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3

Query: 318 QPCHIPTC*GSSTCAPQCQSSHCKWGCKAKCI 413
QPC P+C GSS C P CQ++ C+ + C+
Sbjct: 35 QPCCQPSCCGSSCCQPCCQTTCCRTCFQPCCV 66


>tr|Q9D141|Q9D141_MOUSE Novel member of the keratin associated
protein 9 (Krtap9) family OS=Mus musculus
GN=OTTMUSG00000002206 PE=2 SV=1
Length = 195

Score = 35.0 bits (79), Expect = 2.1
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3

Query: 318 QPCHIPTC*GSSTCAPQCQSSHCKWGCKAKCI 413
QPC P+C GSS C P CQ++ C+ + C+
Sbjct: 35 QPCCQPSCCGSSCCQPCCQTTCCRTCFQPCCV 66


>tr|Q64526|Q64526_MOUSE Keratin associated protein 9-1 OS=Mus
musculus GN=Krtap9-1 PE=2 SV=1
Length = 186

Score = 35.0 bits (79), Expect = 2.1
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3

Query: 318 QPCHIPTC*GSSTCAPQCQSSHCKWGCKAKCI 413
QPC P+C GSS C P CQ++ C+ + C+
Sbjct: 35 QPCCQPSCCGSSCCQPCCQTTCCRTCFQPCCV 66


>tr|A2A4M2|A2A4M2_MOUSE Novel member of the keratin associated
protein 9 (Krtap9) family OS=Mus musculus
GN=OTTMUSG00000002191 PE=4 SV=1
Length = 211

Score = 35.0 bits (79), Expect = 2.1
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3

Query: 318 QPCHIPTC*GSSTCAPQCQSSHCKWGCKAKCI 413
QPC P+C GSS C P CQ++ C+ + C+
Sbjct: 35 QPCCQPSCCGSSCCQPCCQTTCCRTCFQPCCV 66


>tr|Q7NPR8|Q7NPR8_CHRVO Putative uncharacterized protein
OS=Chromobacterium violaceum GN=CV_3090 PE=4 SV=1
Length = 127

Score = 35.0 bits (79), Expect = 2.1
Identities = 20/56 (35%), Positives = 23/56 (41%)
Frame = -3

Query: 471 WKCCYSWGSVDWCRNSCVLLYIWPCSPTCSGWIGTGGRRCCYLSRWGCGKAEHSSH 304
W+C W S+ CR + I GWI T RCC LS C HS H
Sbjct: 2 WQCSGVWASIAACRTASNWPPIRRMPALPGGWIRTS--RCCRLSMLCCCLESHSMH 55


>tr|B1EQC6|B1EQC6_9ESCH Sensor protein OS=Escherichia albertii
TW07627 GN=ESCAB7627_3817 PE=4 SV=1
Length = 607

Score = 35.0 bits (79), Expect = 2.1
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = -1

Query: 287 KERFKTFGQETEGLLSILLEMRQLMSELSVMCQRNYLSKVETSVIKILLRSGRSAVNLTN 108
KE + Q + ++S++ M QL+SEL R+ + K VIK++ SAV+L N
Sbjct: 416 KEMYPQVEQNLKHIISVIERMTQLISELKAFASRHRVPKGSADVIKVMY----SAVSLLN 471

Query: 107 SGVD 96
++
Sbjct: 472 HSME 475


>tr|A2VEC8|A2VEC8_CANFA SCO-spondin OS=Canis familiaris GN=sspo PE=2
SV=1
Length = 5110

Score = 35.0 bits (79), Expect = 2.1
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3

Query: 282 LLNLTGLHVKNAQPCHIPTC*GSSTC-APQCQSSHCKW 392
L N TG +PC++P+C S C +P C + +C W
Sbjct: 3868 LANCTGGEASQERPCNLPSCTEPSPCPSPGCVAGNCSW 3905


>tr|Q8FB08|Q8FB08_ECOL6 Sensor protein OS=Escherichia coli O6
GN=c5041 PE=4 SV=1
Length = 606

Score = 34.3 bits (77), Expect = 3.6
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = -1

Query: 302 KTCQIKERFKTFGQETEGLLSILLEMRQLMSELSVMCQRNYLSKVETSVIKILLRSGRSA 123
+T KE + Q + ++S++ M QL+SEL R+ + K VIK++ SA
Sbjct: 411 RTMLKKEMYPQVEQNLKHIISVIERMTQLISELKAFASRHRVPKGSADVIKVMY----SA 466

Query: 122 VNLTNSGVD 96
V L N ++
Sbjct: 467 VALLNHSME 475


>tr|Q1R3L7|Q1R3L7_ECOUT Sensor protein OS=Escherichia coli (strain
UTI89 / UPEC) GN=UTI89_C4639 PE=4 SV=1
Length = 606

Score = 34.3 bits (77), Expect = 3.6
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = -1

Query: 302 KTCQIKERFKTFGQETEGLLSILLEMRQLMSELSVMCQRNYLSKVETSVIKILLRSGRSA 123
+T KE + Q + ++S++ M QL+SEL R+ + K VIK++ SA
Sbjct: 411 RTMLKKEMYPQVEQNLKHIISVIERMTQLISELKAFASRHRVPKGSADVIKVMY----SA 466

Query: 122 VNLTNSGVD 96
V L N ++
Sbjct: 467 VALLNHSME 475


>tr|Q0T9Z9|Q0T9Z9_ECOL5 Sensor protein OS=Escherichia coli
O6:K15:H31 (strain 536 / UPEC) GN=ECP_4282 PE=4 SV=1
Length = 606

Score = 34.3 bits (77), Expect = 3.6
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = -1

Query: 302 KTCQIKERFKTFGQETEGLLSILLEMRQLMSELSVMCQRNYLSKVETSVIKILLRSGRSA 123
+T KE + Q + ++S++ M QL+SEL R+ + K VIK++ SA
Sbjct: 411 RTMLKKEMYPQVEQNLKHIISVIERMTQLISELKAFASRHRVPKGSADVIKVMY----SA 466

Query: 122 VNLTNSGVD 96
V L N ++
Sbjct: 467 VALLNHSME 475