BP917280
Clone id YMU001_000098_F11
Library
Length 515
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000098_F11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CCAAGTTCTCAAAAAAACCAATTCAAAGTCAATATGAAGCAACAAGGGGCACATGGTATT
TAATTATTCAAGAGAATGATATGAAAGCCGCAAGTGTAAGTAGATATTTATGCATACCAT
ACCATTAAAAGAAATAGTAGGATTCAAGAGCAAGAAGTGAAATCGGGCATCAAAGTTCAC
ACAGATACACAGCAAGAAAATACTAATAGAGTTATCTCTGTGTCAAGATGATGTCAATAA
CCCATTAGATTGGGGACATAAAAGTACCACGAGAACCGCATCATAAAAGTTCCCCAGAGT
TATGTATGAGTCAAGATGACTGTAGCAAACCATCAAGTAAGTGAGCAAAAAGTGAGAGTC
AACCACCAGAACCAGACTAGGTGTTACATGCAAGCAAAACAATAACCAGTGGCCAAAATC
CACCAGATTCTCAACAGATACAACCTATGTCTAAAGTCACAAGGAAGCAACAGAGTAACC
ATATTAAGCCAGGCCTAAGAATTAGGCCTTTGTAT
■■Homology search results ■■ -
sp_hit_id P31392
Definition sp|P31392|GP182_RAT G-protein coupled receptor 182 OS=Rattus norvegicus
Align length 33
Score (bit) 37.0
E-value 0.054
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917280|Adiantum capillus-veneris mRNA, clone:
YMU001_000098_F11.
(515 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P31392|GP182_RAT G-protein coupled receptor 182 OS=Rattus nor... 37 0.054
sp|P43142|GP182_MOUSE G-protein coupled receptor 182 OS=Mus musc... 37 0.071
sp|O15218|GP182_HUMAN G-protein coupled receptor 182 OS=Homo sap... 36 0.093
sp|Q96CP7|TLCD1_HUMAN TLC domain-containing protein 1 OS=Homo sa... 32 2.3
sp|P70526|OLF1_RAT Olfactory receptor 1 OS=Rattus norvegicus GN=... 31 3.0
sp|Q99JT6|TLCD1_MOUSE TLC domain-containing protein 1 OS=Mus mus... 31 3.9
sp|Q5U2T1|TLCD1_RAT TLC domain-containing protein 1 OS=Rattus no... 30 6.7

>sp|P31392|GP182_RAT G-protein coupled receptor 182 OS=Rattus
norvegicus GN=Gpr182 PE=2 SV=3
Length = 395

Score = 37.0 bits (84), Expect = 0.054
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -1

Query: 344 SLT*WFATVILTHT*LWGTFMMRFSWYFYVPNL 246
SL W V+L +T LWG+F RF YFY+ N+
Sbjct: 101 SLPVWMLEVMLEYTWLWGSFSCRFIHYFYLANM 133


>sp|P43142|GP182_MOUSE G-protein coupled receptor 182 OS=Mus
musculus GN=Gpr182 PE=2 SV=1
Length = 395

Score = 36.6 bits (83), Expect = 0.071
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -1

Query: 344 SLT*WFATVILTHT*LWGTFMMRFSWYFYVPNL 246
SL W V+L +T LWG+F RF YFY+ N+
Sbjct: 101 SLPVWMLEVMLEYTWLWGSFSCRFIHYFYLVNM 133


>sp|O15218|GP182_HUMAN G-protein coupled receptor 182 OS=Homo
sapiens GN=GPR182 PE=2 SV=1
Length = 404

Score = 36.2 bits (82), Expect = 0.093
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = -1

Query: 344 SLT*WFATVILTHT*LWGTFMMRFSWYFYVPNL 246
SL W V L +T LWG+F RF+ YFY N+
Sbjct: 105 SLPVWMLEVTLDYTWLWGSFSCRFTHYFYFVNM 137


>sp|Q96CP7|TLCD1_HUMAN TLC domain-containing protein 1 OS=Homo
sapiens GN=TLCD1 PE=2 SV=1
Length = 247

Score = 31.6 bits (70), Expect = 2.3
Identities = 14/43 (32%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = -3

Query: 444 VVSVENLVDFGHWLLFCLHVTPSLVLVVDSHFLLT-YLMVCYS 319
+VS + + G W L C+ TP +++ +++ + L+ YL+VC+S
Sbjct: 49 LVSFAHSIVSGIWALLCVWQTPDMLVEIETAWSLSGYLLVCFS 91


>sp|P70526|OLF1_RAT Olfactory receptor 1 OS=Rattus norvegicus
GN=Olfr1 PE=2 SV=1
Length = 314

Score = 31.2 bits (69), Expect = 3.0
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = -3

Query: 444 VVSVENLVDFGHWLLFCLHVTPSLVLVVDSHFLLTYLMVCYSHLDSYITLGNFYDAVLVV 265
VVS+ ++ F ++ + + S++ V S + C SHL S ++L FY V+ +
Sbjct: 202 VVSLFLVLPFALIIMSYVRIVSSILKVPSSQGIYKAFSTCGSHL-SVVSL--FYGTVIGL 258

Query: 264 LLCPQSN 244
LCP SN
Sbjct: 259 YLCPSSN 265


>sp|Q99JT6|TLCD1_MOUSE TLC domain-containing protein 1 OS=Mus
musculus GN=Tlcd1 PE=2 SV=1
Length = 247

Score = 30.8 bits (68), Expect = 3.9
Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = -3

Query: 444 VVSVENLVDFGHWLLFCLHVTPSLVLVVDSHFLLT-YLMVCYS 319
+VS + + G W L CL TP +++ +++ + + YL+VC+S
Sbjct: 49 LVSFTHSIVSGIWALLCLWQTPEMLVEIETAWSASGYLLVCFS 91


>sp|Q5U2T1|TLCD1_RAT TLC domain-containing protein 1 OS=Rattus
norvegicus GN=Tlcd1 PE=2 SV=1
Length = 247

Score = 30.0 bits (66), Expect = 6.7
Identities = 13/43 (30%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = -3

Query: 444 VVSVENLVDFGHWLLFCLHVTPSLVLVVDSHF-LLTYLMVCYS 319
+VS + + G W L C+ TP +++ +++ + + YL+VC+S
Sbjct: 49 LVSFTHSIVSGIWALLCIWQTPEMLVEIETAWSVCGYLLVCFS 91


tr_hit_id A0BYJ7
Definition tr|A0BYJ7|A0BYJ7_PARTE Chromosome undetermined scaffold_137, whole genome shotgun sequence OS=Paramecium tetraurelia
Align length 62
Score (bit) 38.1
E-value 0.26
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917280|Adiantum capillus-veneris mRNA, clone:
YMU001_000098_F11.
(515 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A0BYJ7|A0BYJ7_PARTE Chromosome undetermined scaffold_137, who... 38 0.26
tr|A1L1I2|A1L1I2_RAT G protein-coupled receptor 182 (RCG59831, i... 37 0.58
tr|A0CTB5|A0CTB5_PARTE Chromosome undetermined scaffold_27, whol... 36 0.98
tr|Q6LAJ3|Q6LAJ3_HUMAN G-protein coupled receptor OS=Homo sapien... 36 0.98
tr|A6QPN2|A6QPN2_BOVIN GPR182 protein (Fragment) OS=Bos taurus G... 35 2.2
tr|Q8CBY2|Q8CBY2_MOUSE Putative uncharacterized protein OS=Mus m... 34 4.9
tr|Q6PCH1|Q6PCH1_XENLA MGC69068 protein OS=Xenopus laevis GN=gpr... 33 6.4
tr|Q1EF98|Q1EF98_METAN Cytochrome c oxidase subunit 1 OS=Metarhi... 27 7.1

>tr|A0BYJ7|A0BYJ7_PARTE Chromosome undetermined scaffold_137, whole
genome shotgun sequence OS=Paramecium tetraurelia
GN=GSPATT00033467001 PE=4 SV=1
Length = 384

Score = 38.1 bits (87), Expect = 0.26
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = -3

Query: 216 DNSISIFLLCICVNFDARFHFLLLNPTISFNGMVCINIYLHLRLSYH-----SLE*LNTM 52
D S+ +F+ C + F L+NP+ F G++C N L + Y +L+ + +
Sbjct: 138 DRSVPLFIFCHALGASMVISFCLMNPSFQFQGLICSNAQLRVPAKYGKFKMLTLKLMTKL 197

Query: 51 CP 46
CP
Sbjct: 198 CP 199


>tr|A1L1I2|A1L1I2_RAT G protein-coupled receptor 182 (RCG59831,
isoform CRA_a) OS=Rattus norvegicus GN=Gpr182 PE=2 SV=1
Length = 398

Score = 37.0 bits (84), Expect = 0.58
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -1

Query: 344 SLT*WFATVILTHT*LWGTFMMRFSWYFYVPNL 246
SL W V+L +T LWG+F RF YFY+ N+
Sbjct: 101 SLPVWMLEVMLEYTWLWGSFSCRFIHYFYLANM 133


>tr|A0CTB5|A0CTB5_PARTE Chromosome undetermined scaffold_27, whole
genome shotgun sequence OS=Paramecium tetraurelia
GN=GSPATT00010266001 PE=4 SV=1
Length = 275

Score = 36.2 bits (82), Expect = 0.98
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = -3

Query: 216 DNSISIFLLCICVNFDARFHFLLLNPTISFNGMVCINIYLHLRLSYH-----SLE*LNTM 52
D S+ +F+ C + F L+NP+ F G++C + L + Y +L+ + +
Sbjct: 138 DRSVPLFIFCHALGASMVISFCLMNPSFQFQGLICSSAQLRVPAKYGKIKMLTLKLMTKL 197

Query: 51 CP 46
CP
Sbjct: 198 CP 199


>tr|Q6LAJ3|Q6LAJ3_HUMAN G-protein coupled receptor OS=Homo sapiens
GN=gamrh PE=2 SV=1
Length = 404

Score = 36.2 bits (82), Expect = 0.98
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = -1

Query: 344 SLT*WFATVILTHT*LWGTFMMRFSWYFYVPNL 246
SL W V L +T LWG+F RF+ YFY N+
Sbjct: 105 SLPVWMLEVTLDYTWLWGSFSCRFTHYFYFVNM 137


>tr|A6QPN2|A6QPN2_BOVIN GPR182 protein (Fragment) OS=Bos taurus
GN=GPR182 PE=2 SV=1
Length = 437

Score = 35.0 bits (79), Expect = 2.2
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -1

Query: 344 SLT*WFATVILTHT*LWGTFMMRFSWYFYVPNL 246
SL W L +T LWG+F RF+ YFY N+
Sbjct: 141 SLPVWMLEATLDYTWLWGSFSCRFTHYFYYANM 173


>tr|Q8CBY2|Q8CBY2_MOUSE Putative uncharacterized protein OS=Mus
musculus GN=OTTMUSG00000013002 PE=2 SV=1
Length = 158

Score = 33.9 bits (76), Expect = 4.9
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Frame = -3

Query: 210 SISIFL---LCICVNFDARFHFLLLNPTISFNGMVC----INIYLHLRLSYHSLE*LNTM 52
S+S+ L L +C++ F+F LL P++SF+ +C +++ + L LS S + +
Sbjct: 58 SVSVSLSVCLHLCLSASLSFYFFLLYPSVSFSLFLCLSVSVSVSVSLSLSLSSSSPFSPV 117

Query: 51 CPLLLH-IDFELVFLRTW 1
P LL+ + V L TW
Sbjct: 118 LPPLLYFLHCFSVILSTW 135


>tr|Q6PCH1|Q6PCH1_XENLA MGC69068 protein OS=Xenopus laevis GN=gpr182
PE=2 SV=1
Length = 363

Score = 33.5 bits (75), Expect = 6.4
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1

Query: 332 WFATVILTHT*LWGTFMMRFSWYFYVPNL 246
W +L +T LWG F+ +F+ YFY N+
Sbjct: 104 WMLETMLEYTWLWGGFLCKFTHYFYFANM 132


>tr|Q1EF98|Q1EF98_METAN Cytochrome c oxidase subunit 1
OS=Metarhizium anisopliae GN=cox1 PE=3 SV=1
Length = 526

Score = 26.9 bits (58), Expect(2) = 7.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1

Query: 293 GTFMMRFSWYFYVPNLMGY*HHLDTEITL 207
G F M WYF++P ++G L+ ++TL
Sbjct: 383 GVFAMFAGWYFWIPKMLG----LNYDLTL 407



Score = 25.0 bits (53), Expect(2) = 7.1
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = -3

Query: 348 LLTYLMVCYSHLDSY--ITLGNFYDAVL 271
LL + + CYSH DSY T+G VL
Sbjct: 329 LLKWHLQCYSHSDSYSCCTIGGLSGVVL 356