BP917144
Clone id YMU001_000096_F07
Library
Length 514
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000096_F07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GATCCACTCCACTGCTTTTTTATCTTTCCTCTTGCCTCCACTAATGGGCACATTCTTCTG
GACATATAGGCAGAAAAACTCTCTTCTGGACACCTGAAGGGCTGCATATATAGGACCCAC
TCCATATACCACCTCACCTACTATTCTGGGCAAAGACGAACTCATCACTGGTAGCTCTCT
CCTTGTGGACCTAAAATCGCCTCCTTTGAGAACATCATCATCGACATCTATATCTTCCTC
TTCCTCTTCATCTCCATTGAGGGCCAGCTGAGCCTCATTCTTGTCTTGAAGCTCGTCCTC
ATTATCATTTGTATCCAAAGGAGACTGCCTTCTGTTCCTCTCTCTACTTGCACCAACCAT
TTCTTCATATCTTATTACATCCCCAGCTTGAGGAAAGTCTTCATTGTCATCTTCGTCATC
TTCAGAGGAAGCCTCAGCCTCCGGGTCATCTTCAGACTGTTTCTGCACCTGAGCTCCTGA
AGATCTATTTGAAACTAATTGCCCTCCCTTCATG
■■Homology search results ■■ -
sp_hit_id Q7TN75
Definition sp|Q7TN75|PEG10_MOUSE Retrotransposon-derived protein PEG10 OS=Mus musculus
Align length 56
Score (bit) 31.2
E-value 2.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917144|Adiantum capillus-veneris mRNA, clone:
YMU001_000096_F07.
(514 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7TN75|PEG10_MOUSE Retrotransposon-derived protein PEG10 OS=M... 31 2.9
sp|Q6KZL5|DHYS_PICTO Probable deoxyhypusine synthase OS=Picrophi... 30 8.5
sp|Q65T49|CYSG_MANSM Siroheme synthase OS=Mannheimia succinicipr... 30 8.7

>sp|Q7TN75|PEG10_MOUSE Retrotransposon-derived protein PEG10 OS=Mus
musculus GN=Peg10 PE=1 SV=2
Length = 958

Score = 31.2 bits (69), Expect = 2.9
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Frame = +3

Query: 300 HYHLYPKETAFCSSL---YLHQ---PFLHILLHPQLEESLHCHLRHLQRKPQPPGH 449
H+HL P + YLHQ FLH LHP L + L+ +L H P P H
Sbjct: 615 HHHLPPDQHEHLHEYLHQYLHQYLHQFLHHHLHPDLHQYLYQYL-HNHMNPDPHHH 669


>sp|Q6KZL5|DHYS_PICTO Probable deoxyhypusine synthase OS=Picrophilus
torridus GN=dys PE=3 SV=1
Length = 311

Score = 29.6 bits (65), Expect = 8.5
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = -3

Query: 89 PEESFSAYMSRRMCPLVEARGKIKKQWSG 3
P+ES+ + + ++ P+++ K KK+WSG
Sbjct: 130 PDESYGSIIEEKVMPILDELYKEKKEWSG 158


>sp|Q65T49|CYSG_MANSM Siroheme synthase OS=Mannheimia
succiniciproducens (strain MBEL55E) GN=cysG PE=3 SV=2
Length = 476

Score = 29.6 bits (65), Expect = 8.7
Identities = 35/136 (25%), Positives = 56/136 (41%), Gaps = 7/136 (5%)
Frame = -2

Query: 390 QAGDVIRYEEMVGAS-RERNRRQSPLDTNDNEDELQDKNEAQLALNGXXXXXXXXXXXXX 214
Q DV+ Y+ +V A + RR + L Q + AQ N
Sbjct: 238 QQADVVLYDALVSAEILDLVRRDAELIFVGKR--AQGRQVAQQETNQLLADLALQGKRVV 295

Query: 213 VLKGGD---FRSTRRELPVMSSS-LP-RIVGEVVYGVGPI-YAALQVSRREFFCLYVQKN 52
LKGGD F EL V++ +P +V + +G YA + ++ R+ Y Q
Sbjct: 296 RLKGGDPFVFGRGGEELEVLAQQGIPFSVVPGITAAIGATAYAGIPLTHRD----YAQSA 351

Query: 51 VPISGGKRKDKKAVEW 4
V ++G ++ D +EW
Sbjct: 352 VFVTGHRKADASDIEW 367


tr_hit_id B4FXA9
Definition tr|B4FXA9|B4FXA9_MAIZE Putative uncharacterized protein OS=Zea mays
Align length 53
Score (bit) 67.4
E-value 4.0e-10
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917144|Adiantum capillus-veneris mRNA, clone:
YMU001_000096_F07.
(514 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B4FXA9|B4FXA9_MAIZE Putative uncharacterized protein OS=Zea m... 67 4e-10
tr|A7PEG9|A7PEG9_VITVI Chromosome chr11 scaffold_13, whole genom... 64 3e-09
tr|Q8W497|Q8W497_ARATH Putative uncharacterized protein At2g1987... 63 8e-09
tr|O82194|O82194_ARATH Putative uncharacterized protein At2g1987... 63 8e-09
tr|A2WUX5|A2WUX5_ORYSI Putative uncharacterized protein OS=Oryza... 61 4e-08
tr|Q5JKV8|Q5JKV8_ORYSJ Putative tRNA/rRNA methyltransferase OS=O... 59 1e-07
tr|A2ZXP3|A2ZXP3_ORYSJ Putative uncharacterized protein OS=Oryza... 59 1e-07
tr|A9T6G4|A9T6G4_PHYPA Predicted protein OS=Physcomitrella paten... 56 9e-07
tr|A4S7U0|A4S7U0_OSTLU Predicted protein OS=Ostreococcus lucimar... 43 0.011
tr|Q00UW9|Q00UW9_OSTTA SpoU rRNA Methylase family protein (ISS) ... 40 0.068
tr|B4N8T4|B4N8T4_DROWI GK10970 OS=Drosophila willistoni GN=GK109... 37 0.43
tr|A5BN40|A5BN40_VITVI Putative uncharacterized protein OS=Vitis... 33 8.1

>tr|B4FXA9|B4FXA9_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 559

Score = 67.4 bits (163), Expect = 4e-10
Identities = 32/53 (60%), Positives = 43/53 (81%), Gaps = 2/53 (3%)
Frame = -2

Query: 159 SSLPRIVGEVVYGVGPIYAALQVSRREFFCLYVQKNVPISGG--KRKDKKAVE 7
SS+P++VG+ VYGVGP+ AAL RREF+ LY+Q+++ +SG KRKDKKAVE
Sbjct: 250 SSVPKMVGQGVYGVGPVLAALMARRREFYALYIQESMDLSGNNKKRKDKKAVE 302


>tr|A7PEG9|A7PEG9_VITVI Chromosome chr11 scaffold_13, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00016662001
PE=3 SV=1
Length = 565

Score = 64.3 bits (155), Expect = 3e-09
Identities = 30/53 (56%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Frame = -2

Query: 159 SSLPRIVGEVVYGVGPIYAALQVSRREFFCLYVQKNVPISGG--KRKDKKAVE 7
S++P+IVGE +YGVGP+ AAL RREF+ LYVQ+ + +SG K+KDKK E
Sbjct: 290 STIPKIVGEGIYGVGPVLAALSAGRREFYALYVQEGLDLSGNNRKKKDKKGFE 342


>tr|Q8W497|Q8W497_ARATH Putative uncharacterized protein At2g19870;
F6F22.10 (Putative uncharacterized protein)
OS=Arabidopsis thaliana GN=At2g19870/F6F22.10 PE=2 SV=1
Length = 589

Score = 63.2 bits (152), Expect = 8e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Frame = -2

Query: 159 SSLPRIVGEVVYGVGPIYAALQVSRREFFCLYVQKNVPISGG--KRKDKKAVE 7
SS+PR+ GEVVYGV P+ AAL V RREF+ LYVQ+ + +S K+KDKK E
Sbjct: 306 SSVPRLEGEVVYGVSPVLAALSVGRREFYALYVQEGLDLSSNNRKKKDKKGFE 358


>tr|O82194|O82194_ARATH Putative uncharacterized protein At2g19870
OS=Arabidopsis thaliana GN=At2g19870 PE=3 SV=1
Length = 577

Score = 63.2 bits (152), Expect = 8e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Frame = -2

Query: 159 SSLPRIVGEVVYGVGPIYAALQVSRREFFCLYVQKNVPISGG--KRKDKKAVE 7
SS+PR+ GEVVYGV P+ AAL V RREF+ LYVQ+ + +S K+KDKK E
Sbjct: 294 SSVPRLEGEVVYGVSPVLAALSVGRREFYALYVQEGLDLSSNNRKKKDKKGFE 346


>tr|A2WUX5|A2WUX5_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_03687 PE=3 SV=1
Length = 517

Score = 60.8 bits (146), Expect = 4e-08
Identities = 27/53 (50%), Positives = 41/53 (77%), Gaps = 2/53 (3%)
Frame = -2

Query: 159 SSLPRIVGEVVYGVGPIYAALQVSRREFFCLYVQK--NVPISGGKRKDKKAVE 7
S++P++VG+ VYGVGP+ AAL RREF+ LY+Q+ ++ +S K+KDKK +E
Sbjct: 215 STVPKMVGQGVYGVGPVLAALMAERREFYALYIQEGMDLSVSNKKKKDKKGIE 267


>tr|Q5JKV8|Q5JKV8_ORYSJ Putative tRNA/rRNA methyltransferase
OS=Oryza sativa subsp. japonica GN=P0439E07.12 PE=3 SV=1
Length = 517

Score = 59.3 bits (142), Expect = 1e-07
Identities = 26/53 (49%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Frame = -2

Query: 159 SSLPRIVGEVVYGVGPIYAALQVSRREFFCLYVQKNV--PISGGKRKDKKAVE 7
S++P++VG+ VYGVGP+ AAL RR+F+ LY+Q+ + +S K+KDKK +E
Sbjct: 215 STVPKMVGQGVYGVGPVLAALMAERRDFYALYIQEGMDFSVSNKKKKDKKGIE 267


>tr|A2ZXP3|A2ZXP3_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_003315 PE=3 SV=1
Length = 427

Score = 59.3 bits (142), Expect = 1e-07
Identities = 26/53 (49%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Frame = -2

Query: 159 SSLPRIVGEVVYGVGPIYAALQVSRREFFCLYVQKNV--PISGGKRKDKKAVE 7
S++P++VG+ VYGVGP+ AAL RR+F+ LY+Q+ + +S K+KDKK +E
Sbjct: 125 STVPKMVGQGVYGVGPVLAALMAERRDFYALYIQEGMDFSVSNKKKKDKKGIE 177


>tr|A9T6G4|A9T6G4_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_192080 PE=3 SV=1
Length = 280

Score = 56.2 bits (134), Expect = 9e-07
Identities = 30/51 (58%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = -2

Query: 147 RIVGEVVYGVGPIYAALQVSRREFFCLYVQKNV--PISGGKRKDKKAVEWI 1
R+ GE VYGV PI AA RR F LYVQ N+ I+ GKRKDK+AV WI
Sbjct: 15 RVEGEAVYGVAPIRAAFLAERRIFHTLYVQTNLVDNIATGKRKDKQAVNWI 65


>tr|A4S7U0|A4S7U0_OSTLU Predicted protein OS=Ostreococcus
lucimarinus (strain CCE9901) GN=OSTLU_27615 PE=3 SV=1
Length = 318

Score = 42.7 bits (99), Expect = 0.011
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = -2

Query: 198 DFRSTRRELPVMSSSLPRIVGEVVYGVGPIYAALQVSRREFFCLYVQ--KNVPISGGK 31
D + RRE V + +VGE+VYG P+ AL+ +RR F LYVQ + +GGK
Sbjct: 41 DRAAARRERGVAPTIAEGLVGEIVYGTNPVLEALRRNRRALFALYVQTGEGGAANGGK 98


>tr|Q00UW9|Q00UW9_OSTTA SpoU rRNA Methylase family protein (ISS)
OS=Ostreococcus tauri GN=Ot15g02390 PE=3 SV=1
Length = 320

Score = 40.0 bits (92), Expect = 0.068
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = -2

Query: 198 DFRSTRRELPVMSSSLPRIVGEVVYGVGPIYAALQVSRREFFCLYVQ 58
D R+ RRE + ++GE+VYG P+ AL+ +RR F LYVQ
Sbjct: 51 DRRAIRRERGDGPTIAEGLIGEMVYGTNPVLEALRQNRRTLFALYVQ 97