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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917133
Clone id YMU001_000096_E02
Library
Length 491
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000096_E02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AACTGGAAGAATTCGCGGCCAACTGGAAGAATTCGCGGTCGCAGGAATTTTTTTTTTTTT
TTTTTGAACCTTGACCATTCTGTTACATGAGTAGCCCGCCATCTTTCACATTTCCAGATT
ATTTCTGGCTCTAGAATTACACTGCAAAAGAGCAGATTCCTCGAGCTACAAAACTGTGCC
ACAGATACAAGCTAACAAATCTTATCATCAGAATGTTCAACCTCACTCCAAAATTGGTAA
CTACAATCCTGCACCTAATTTTAACATAATGCTGGTTTTACCTTGCTTCTACCGTTTGAT
CTGTTGAGTTGAATTCACGTGCCTTCCGCTTGCCAACATTGTGACAAATTGTTCCTCAAG
CTTCACTCTGTGCCGGCGATTACTGGCATAAAATCATTGCCAATCGTTTGATCATAAGAT
GAACATTTACTGGCTGTTAGGACGATTCCTTTACACTTTCTTATTCCATATCCACCGTGT
CTTCATCATTA
■■Homology search results ■■ -
sp_hit_id Q3UN16
Definition sp|Q3UN16|GP162_MOUSE Probable G-protein coupled receptor 162 OS=Mus musculus
Align length 32
Score (bit) 31.2
E-value 1.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917133|Adiantum capillus-veneris mRNA, clone:
YMU001_000096_E02.
         (426 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q3UN16|GP162_MOUSE Probable G-protein coupled receptor 162 OS...    31   1.8  
sp|Q16538|GP162_HUMAN Probable G-protein coupled receptor 162 OS...    31   1.8  
sp|P00770|MCPT2_RAT Mast cell protease 2 OS=Rattus norvegicus GN...    29   6.8  
sp|Q9D7N2|KR261_MOUSE Keratin-associated protein 26-1 OS=Mus mus...    29   6.8  

>sp|Q3UN16|GP162_MOUSE Probable G-protein coupled receptor 162
           OS=Mus musculus GN=Gpr162 PE=2 SV=2
          Length = 588

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
 Frame = -1

Query: 90  LLFCSV---ILEPEIIWKCERWRATHVTEWSR 4
           +L+CS+   +L P  IW CER+RA   T W +
Sbjct: 309 VLWCSMAQTLLLPSFIWSCERYRADVRTVWEQ 340


>sp|Q16538|GP162_HUMAN Probable G-protein coupled receptor 162
           OS=Homo sapiens GN=GPR162 PE=2 SV=1
          Length = 588

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
 Frame = -1

Query: 90  LLFCSV---ILEPEIIWKCERWRATHVTEWSR 4
           +L+CS+   +L P  IW CER+RA   T W +
Sbjct: 309 VLWCSMAQTLLLPSFIWSCERYRADVRTVWEQ 340


>sp|P00770|MCPT2_RAT Mast cell protease 2 OS=Rattus norvegicus
           GN=Mcpt2 PE=1 SV=1
          Length = 247

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
 Frame = +3

Query: 39  FHISRLFLALELHCKRADSSSYKTVPQIQANKSYHQNVQPHSKI--GNYNPAPNFNIMLV 212
           F ISR F+    HCK  + +       ++  +S  Q ++   +I   +YN  PN + +++
Sbjct: 53  FLISRQFVLTAAHCKGREITVILGAHDVRKRESTQQKIKVEKQIIHESYNSVPNLHDIML 112

Query: 213 LPCFYRLIC*VEFTCLPLANIV 278
           L    +L   VE T  P  N+V
Sbjct: 113 L----KLEKKVELT--PAVNVV 128


>sp|Q9D7N2|KR261_MOUSE Keratin-associated protein 26-1 OS=Mus
           musculus GN=Krtap26-1 PE=2 SV=1
          Length = 215

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +3

Query: 150 VQPHSKIGNYNPAPNFNIMLVLPCFYRLIC*VEFTCLPLANIVTNC 287
           V  H +   Y PA +F     LP  YR +  V  +C P++  + NC
Sbjct: 90  VPRHCQGSGYIPASSFISGSCLPASYRPVSYVSSSCRPVSPFMNNC 135
tr_hit_id B3R775
Definition tr|B3R775|B3R775_CUPTR Putative PROPIONYL-COA CARBOXYLASE (BETA SUBUNIT) PROTEIN OS=Cupriavidus taiwanensis (strain R1 / LMG 19424)
Align length 46
Score (bit) 33.1
E-value 7.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917133|Adiantum capillus-veneris mRNA, clone:
YMU001_000096_E02.
         (426 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B3R775|B3R775_CUPTR Putative PROPIONYL-COA CARBOXYLASE (BETA ...    33   7.0  

>tr|B3R775|B3R775_CUPTR Putative PROPIONYL-COA CARBOXYLASE (BETA
           SUBUNIT) PROTEIN OS=Cupriavidus taiwanensis (strain R1 /
           LMG 19424) GN=RALTA_A2850 PE=4 SV=1
          Length = 533

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = -3

Query: 325 YASNRRHRVKLEEQFVTMLASGRHVNSTQQIKR*K-QGKTSIMLKL 191
           Y +NR H ++L ++F   +   RHV + + +KR + QGK  +  +L
Sbjct: 15  YKANREHNLRLRDEFRATMHDARHVRAERDVKRLRDQGKLLVRERL 60