BP917100
Clone id YMU001_000095_H06
Library
Length 514
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000095_H06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GCTGTCCCCCGGGGCAGAGAGGATATGCAGACTTTGCACAGCAGACATTGAGAGTGAGGA
GCATTTTGTGTGCAGATGTAGAGCATATGAGGGGATCAGAGGCAGATATCCGACTTTGTT
TGCATATCGGCCCACCTTACACCAGATTCTTCAGTCTAGAGACCAGCAACTTTTCGGCCG
CTTCCTCATAGAGGCACAGCAGGACCGGGACTCTCTCCTTCAGACATCATCAGTCGTGAG
AGACGAGCGCCAAACACAAATTTCTTCCAGAGAGGCACAGTAGCACCACCATCCCAGACG
ACTCAGAGAGGAGTGACTCTACAGCAGGCTGAGGAGGTCCGAGCTCGCAGACGTCCACGC
CCCCATGGGCGTAGGGCACTCCGACTTTACCAGAGAGAGATCCAGGAGATCCAAGAGCGC
TACTACAGATCTCTAGAGGAGAGACGCATCCGAGATTTTGCAGATCCAACCGCCATCCTA
CGGGGATTGTTCACACCTTACCCACCCATGCATC
■■Homology search results ■■ -
sp_hit_id Q9WVG9
Definition sp|Q9WVG9|MS3L1_MOUSE Male-specific lethal 3 homolog OS=Mus musculus
Align length 76
Score (bit) 33.9
E-value 0.45
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917100|Adiantum capillus-veneris mRNA, clone:
YMU001_000095_H06.
(514 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9WVG9|MS3L1_MOUSE Male-specific lethal 3 homolog OS=Mus musc... 34 0.45
sp|Q6DCV1|AB1IP_XENLA Amyloid beta A4 precursor protein-binding ... 32 1.7
sp|Q8N568|DCLK2_HUMAN Serine/threonine-protein kinase DCLK2 OS=H... 31 2.9
sp|Q8N350|DOS_HUMAN Protein Dos OS=Homo sapiens GN=DOS PE=1 SV=2 31 3.8
sp|Q6NZQ8|MARH1_MOUSE E3 ubiquitin-protein ligase MARCH1 OS=Mus ... 31 3.9
sp|Q8TCQ1|MARH1_HUMAN E3 ubiquitin-protein ligase MARCH1 OS=Homo... 31 3.9
sp|Q5R6Y9|MS3L1_PONAB Male-specific lethal 3 homolog OS=Pongo ab... 30 5.0
sp|Q8N5Y2|MS3L1_HUMAN Male-specific lethal 3 homolog OS=Homo sap... 30 5.0
sp|Q6PGN3|DCLK2_MOUSE Serine/threonine-protein kinase DCLK2 OS=M... 30 5.0
sp|A5EBX1|ATPB2_BRASB ATP synthase subunit beta 2 OS=Bradyrhizob... 30 5.1
sp|P67876|RNMG_ASPRE Ribonuclease mitogillin OS=Aspergillus rest... 30 6.5
sp|P67875|RNMG_ASPFU Ribonuclease mitogillin OS=Aspergillus fumi... 30 6.5
sp|Q924L1|LTMD1_MOUSE LETM1 domain-containing protein 1 OS=Mus m... 30 6.5
sp|Q5R4S0|AAKG2_PONAB 5'-AMP-activated protein kinase subunit ga... 30 8.5
sp|Q54ED3|DNJA1_DICDI DnaJ homolog subfamily A member 1 homolog ... 30 8.7

>sp|Q9WVG9|MS3L1_MOUSE Male-specific lethal 3 homolog OS=Mus
musculus GN=Msl3 PE=2 SV=3
Length = 525

Score = 33.9 bits (76), Expect = 0.45
Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +3

Query: 243 TSAKHKFLPERHSSTTIPDDSERSDSTAG*GGPSSQTST---PPWA*GTPTLPERDPGDP 413
TS+K FLP + S+TT E + PS+ ST PP G P P+R +P
Sbjct: 290 TSSKF-FLPIKESTTTTNRSQEELSPSPPLLNPSTPQSTESQPPT--GEPATPKRRKAEP 346

Query: 414 RALLQISRGETHPRFC 461
AL + R H C
Sbjct: 347 EALQSLRRSTRHSTNC 362


>sp|Q6DCV1|AB1IP_XENLA Amyloid beta A4 precursor protein-binding
family B member 1-interacting protein OS=Xenopus laevis
GN=apbb1ip PE=2 SV=2
Length = 653

Score = 32.0 bits (71), Expect = 1.7
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3

Query: 342 SSQTSTPPWA*GTPTLPERDPGDPRALLQISRGETHPRF 458
SS+ + P TPT+ +R P PR ISR HP F
Sbjct: 473 SSEVNKPETKSATPTVTKRPPPTPRRASSISRVTDHPAF 511


>sp|Q8N568|DCLK2_HUMAN Serine/threonine-protein kinase DCLK2 OS=Homo
sapiens GN=DCLK2 PE=2 SV=3
Length = 766

Score = 31.2 bits (69), Expect = 2.9
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3

Query: 273 RHSSTTIPDDSERSDSTAG*GG-PSSQTSTPPWA*GTPTLPERDPGDPRALLQIS 434
++S + P S RS S A G PSSQ STP + + P PG R L QIS
Sbjct: 302 KYSGSKSPGPSRRSKSPASVNGTPSSQLSTPKSTKSSSSSPT-SPGSFRGLKQIS 355


>sp|Q8N350|DOS_HUMAN Protein Dos OS=Homo sapiens GN=DOS PE=1 SV=2
Length = 725

Score = 30.8 bits (68), Expect = 3.8
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +3

Query: 276 HSSTTIPDDSERSDSTAG*GGPSSQTSTPPWA*GTPTLPERDPGDPRALLQISRG 440
HSS+ DS RS ++G G + + PP +P P G+ R LLQ+ G
Sbjct: 473 HSSSGNDRDSVRSGDSSGSGSGGAAPAFPP---PSPPAPRPKDGEARRLLQMDSG 524


>sp|Q6NZQ8|MARH1_MOUSE E3 ubiquitin-protein ligase MARCH1 OS=Mus
musculus GN=March1 PE=2 SV=2
Length = 289

Score = 30.8 bits (68), Expect = 3.9
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +2

Query: 8 PGAERICRLCTADIESEEHFVCRCRAYEGIRGRYPTLFAYRPTLHQILQSRD 163
P + ICR+C + + E + CR +R F ++ LHQ ++S D
Sbjct: 74 PSTQDICRICHCEGDEESPLITPCRCTGTLR------FVHQSCLHQWIKSSD 119


>sp|Q8TCQ1|MARH1_HUMAN E3 ubiquitin-protein ligase MARCH1 OS=Homo
sapiens GN=MARCH1 PE=2 SV=1
Length = 289

Score = 30.8 bits (68), Expect = 3.9
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +2

Query: 8 PGAERICRLCTADIESEEHFVCRCRAYEGIRGRYPTLFAYRPTLHQILQSRD 163
P + ICR+C + + E + CR +R F ++ LHQ ++S D
Sbjct: 74 PSTQDICRICHCEGDEESPLITPCRCTGTLR------FVHQSCLHQWIKSSD 119


>sp|Q5R6Y9|MS3L1_PONAB Male-specific lethal 3 homolog OS=Pongo
abelii GN=MSL3 PE=2 SV=1
Length = 521

Score = 30.4 bits (67), Expect = 5.0
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +3

Query: 243 TSAKHKFLPERHSSTTIPDDSERSDSTAG*GGPSSQTSTPPW-A*GTPTLPERDPGDPRA 419
TS+K FLP + S+T+ E + PS+ ST G P P+R +P A
Sbjct: 286 TSSKF-FLPIKESATSTNRSQEELSPSPPLLNPSTPQSTESQPTTGEPATPKRRKAEPEA 344

Query: 420 LLQISRGETHPRFC 461
L + R H C
Sbjct: 345 LQSLRRSTRHSANC 358


>sp|Q8N5Y2|MS3L1_HUMAN Male-specific lethal 3 homolog OS=Homo
sapiens GN=MSL3 PE=1 SV=1
Length = 521

Score = 30.4 bits (67), Expect = 5.0
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +3

Query: 243 TSAKHKFLPERHSSTTIPDDSERSDSTAG*GGPSSQTSTPPW-A*GTPTLPERDPGDPRA 419
TS+K FLP + S+T+ E + PS+ ST G P P+R +P A
Sbjct: 286 TSSKF-FLPIKESATSTNRSQEELSPSPPLLNPSTPQSTESQPTTGEPATPKRRKAEPEA 344

Query: 420 LLQISRGETHPRFC 461
L + R H C
Sbjct: 345 LQSLRRSTRHSANC 358


>sp|Q6PGN3|DCLK2_MOUSE Serine/threonine-protein kinase DCLK2 OS=Mus
musculus GN=Dclk2 PE=2 SV=1
Length = 756

Score = 30.4 bits (67), Expect = 5.0
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3

Query: 273 RHSSTTIPDDSERSDSTAG*GG-PSSQTSTPPWA*GTPTLPERDPGDPRALLQIS 434
++S + P S RS S A G PSSQ STP + + P PG R L QIS
Sbjct: 301 KYSGSRSPGFSRRSKSPASVNGTPSSQLSTPKSTKSSSSSPT-SPGSFRGLKQIS 354


>sp|A5EBX1|ATPB2_BRASB ATP synthase subunit beta 2 OS=Bradyrhizobium
sp. (strain BTAi1 / ATCC BAA-1182) GN=atpD2 PE=3 SV=1
Length = 476

Score = 30.4 bits (67), Expect = 5.1
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -2

Query: 135 VGRYANKVGYLPLIPSYALHLHTKCSSLSMSAVQSLHILSAPGD 4
+GR ++VGY P + S L + +S++ +A+ S+ + P D
Sbjct: 270 LGRLPSRVGYQPTLASEIAELQERIASVAGAAITSIQAVYVPAD 313


tr_hit_id A2CEC7
Definition tr|A2CEC7|A2CEC7_DANRE Novel protein similar to Down syndrome cell adhesion molecule (Dscam) (Fragment) OS=Danio rerio
Align length 105
Score (bit) 35.0
E-value 2.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917100|Adiantum capillus-veneris mRNA, clone:
YMU001_000095_H06.
(514 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A2CEC7|A2CEC7_DANRE Novel protein similar to Down syndrome ce... 35 2.1
tr|Q5YTK7|Q5YTK7_NOCFA Putative shikimate kinase OS=Nocardia far... 35 2.8
tr|Q5RJQ2|Q5RJQ2_RAT Male-specific lethal-3 homolog 1 (Drosophil... 34 4.8
tr|B1AUJ8|B1AUJ8_MOUSE Male-specific lethal-3 homolog 1 OS=Mus m... 34 4.8
tr|B1AUJ7|B1AUJ7_MOUSE Male-specific lethal-3 homolog 1 OS=Mus m... 34 4.8
tr|Q4T208|Q4T208_TETNG Chromosome 7 SCAF10400, whole genome shot... 33 6.2
tr|B8BVS9|B8BVS9_THAPS Predicted protein OS=Thalassiosira pseudo... 33 6.2

>tr|A2CEC7|A2CEC7_DANRE Novel protein similar to Down syndrome cell
adhesion molecule (Dscam) (Fragment) OS=Danio rerio
GN=CH211-69G13.1-001 PE=4 SV=1
Length = 1904

Score = 35.0 bits (79), Expect = 2.1
Identities = 33/105 (31%), Positives = 44/105 (41%), Gaps = 1/105 (0%)
Frame = +3

Query: 132 PPYTRFFSLETSNFSAASS*RHSRTGTLSFRHHQS*ETSAKHKFLPERHSSTTIPDDSER 311
PPY R L N AASS R + TG +S T + + P SE
Sbjct: 1788 PPYLRMDFL--LNRGAASSGREA-TGQTCMDPQKSRIT---------KRPALLAPTPSET 1835

Query: 312 SDSTAG*GGPSSQTSTPPWA*GTP-TLPERDPGDPRALLQISRGE 443
S GP S+ + W GT TLP+R+PGD ++S +
Sbjct: 1836 PSSALSSSGPPSREAVQQWQPGTASTLPQREPGDLAQAAKLSSSQ 1880


>tr|Q5YTK7|Q5YTK7_NOCFA Putative shikimate kinase OS=Nocardia
farcinica GN=aroK PE=4 SV=1
Length = 493

Score = 34.7 bits (78), Expect = 2.8
Identities = 30/91 (32%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Frame = +3

Query: 210 TLSFRHHQS*ETSAKHKFLPERHSS-TTIPDDSERSDSTAG*GGPSSQTSTPPWA*GTPT 386
T RHH S A + P R +T P ++R D G P + +T A TP
Sbjct: 315 TRDARHHASTPGRAPVRRRPRRRRGRSTDPTSTDRRDRATTSGAPPADETTDTTA-STPG 373

Query: 387 LPERDPGDPRALLQISRGETHPRFCRSNRHP 479
P+R P PRA + S T RS R P
Sbjct: 374 RPDRSPDRPRA--RRSGDRTRHAAPRSTRAP 402


>tr|Q5RJQ2|Q5RJQ2_RAT Male-specific lethal-3 homolog 1 (Drosophila)
OS=Rattus norvegicus GN=Msl3l1 PE=2 SV=1
Length = 466

Score = 33.9 bits (76), Expect = 4.8
Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +3

Query: 243 TSAKHKFLPERHSSTTIPDDSERSDSTAG*GGPSSQTST---PPWA*GTPTLPERDPGDP 413
TS+K FLP + S+TT E + PS+ ST PP G P P+R +P
Sbjct: 231 TSSKF-FLPIKESTTTTNRSQEELSPSPPLLNPSTPQSTESQPPT--GEPATPKRRKAEP 287

Query: 414 RALLQISRGETHPRFC 461
AL + R H C
Sbjct: 288 EALQSLRRSTRHSTNC 303


>tr|B1AUJ8|B1AUJ8_MOUSE Male-specific lethal-3 homolog 1 OS=Mus
musculus GN=Msl31 PE=4 SV=1
Length = 466

Score = 33.9 bits (76), Expect = 4.8
Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +3

Query: 243 TSAKHKFLPERHSSTTIPDDSERSDSTAG*GGPSSQTST---PPWA*GTPTLPERDPGDP 413
TS+K FLP + S+TT E + PS+ ST PP G P P+R +P
Sbjct: 231 TSSKF-FLPIKESTTTTNRSQEELSPSPPLLNPSTPQSTESQPPT--GEPATPKRRKAEP 287

Query: 414 RALLQISRGETHPRFC 461
AL + R H C
Sbjct: 288 EALQSLRRSTRHSTNC 303


>tr|B1AUJ7|B1AUJ7_MOUSE Male-specific lethal-3 homolog 1 OS=Mus
musculus GN=Msl31 PE=4 SV=1
Length = 525

Score = 33.9 bits (76), Expect = 4.8
Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +3

Query: 243 TSAKHKFLPERHSSTTIPDDSERSDSTAG*GGPSSQTST---PPWA*GTPTLPERDPGDP 413
TS+K FLP + S+TT E + PS+ ST PP G P P+R +P
Sbjct: 290 TSSKF-FLPIKESTTTTNRSQEELSPSPPLLNPSTPQSTESQPPT--GEPATPKRRKAEP 346

Query: 414 RALLQISRGETHPRFC 461
AL + R H C
Sbjct: 347 EALQSLRRSTRHSTNC 362


>tr|Q4T208|Q4T208_TETNG Chromosome 7 SCAF10400, whole genome shotgun
sequence. (Fragment) OS=Tetraodon nigroviridis
GN=GSTENG00008556001 PE=4 SV=1
Length = 781

Score = 33.5 bits (75), Expect = 6.2
Identities = 24/64 (37%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +3

Query: 279 SSTTIPDDSERSDSTAG*GGPSSQTSTPPWA*GTPTLPERDPGDPRALLQISRGET--HP 452
SSTT P S S S GG +S + TPP + G+P L G R L + P
Sbjct: 556 SSTTPPSSSSSSSSRVDGGGGASLSLTPPSSPGSPGLAASSSGHWRTRLNSFKNNLLGSP 615

Query: 453 RFCR 464
RF R
Sbjct: 616 RFHR 619


>tr|B8BVS9|B8BVS9_THAPS Predicted protein OS=Thalassiosira
pseudonana CCMP1335 GN=THAPSDRAFT_2942 PE=4 SV=1
Length = 1964

Score = 33.5 bits (75), Expect = 6.2
Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3

Query: 276 HSSTTIPDDSERSDSTAG*GGPSSQTSTPPWA*GTPT-LPERDP 404
HSS T S SDS + G PSSQ S P + G PT +P P
Sbjct: 28 HSSCTTKPSSAPSDSPSASGAPSSQPSDSPSSSGQPTSMPSDSP 71



Score = 33.5 bits (75), Expect = 6.2
Identities = 30/93 (32%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Frame = +3

Query: 246 SAKHKFLPERHSSTTIPDDSERSDSTAG*GGPSSQTSTPPWA*GTPT-LPERDP---GDP 413
S K P S ++ S SDS + G PSSQ S P + G PT +P P G P
Sbjct: 1866 SGKPSSAPSGSPSRSVEPSSAPSDSPSASGAPSSQPSDSPSSSGQPTSMPSDSPSLSGKP 1925

Query: 414 RALLQISRG---ETHPRFCRSNRHPTGIVHTLP 503
+ S E P S HPT + P
Sbjct: 1926 SSAPSGSPSHSVEPPPTAIPSTLHPTKVPTVRP 1958