| BP917078 |
| Clone id |
YMU001_000095_F03 |
| Library |
YMU01 |
| Length |
438 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000095_F03. |
| Accession |
BP917078 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
CL4266Contig1 |
| Sequence |
GTGGCACCCCATAGGAACCACCCATTTCGAGCTTGCTTTGGACCCGAACTTTCCATATCC
ACTCCCTCTTAACTGGGGCATCGATGCTACCAACCCTTCTTTCAAAAAAGTTGGACCTTT
ACAGTCACGTGAACAACACCGCCACATGGGCTCCCATGTTAGCATATGACTGTCCTCTAA
TGGCACCATCAAGTGCCCACTGTGCCACCGAACACATAGAGCACCAGCGCCAACAAGCGG
CGGAACCATGCACGCTCTCGCAGCGCCCGACACCAAGCGGACATGGCCAACAGCTCACTG
GAGCTTGCACTCTGCCCTTCGATGCCCAATAGAAGTGCCTTTTGCCATATAAATACCCCG
ACGACCCAAGCTAGCCTTTGCATACGAGTTTATGCACCCACCATGTGGCACGCTCTCGAA
ATCCCATCCCTCCTTGTT |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q9UPR5 |
| Definition |
sp|Q9UPR5|NAC2_HUMAN Sodium/calcium exchanger 2 OS=Homo sapiens |
| Align length |
51 |
| Score (bit) |
32.7 |
| E-value |
0.68 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
Q3BSV7 |
| Definition |
tr|Q3BSV7|Q3BSV7_XANC5 Putative secreted protein OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) |
| Align length |
40 |
| Score (bit) |
37.0 |
| E-value |
0.49 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917078|Adiantum capillus-veneris mRNA, clone:
YMU001_000095_F03.
(438 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|Q3BSV7|Q3BSV7_XANC5 Putative secreted protein OS=Xanthomonas ... 37 0.49
tr|B4FPI0|B4FPI0_MAIZE Putative uncharacterized protein OS=Zea m... 36 0.84
tr|Q69PS1|Q69PS1_ORYSJ Putative uncharacterized protein OSJNBb00... 34 4.1
tr|A1DL02|A1DL02_NEOFI C2H2 finger domain protein, putative OS=N... 34 4.1
tr|Q1V5A2|Q1V5A2_VIBAL Putative multicopper oxidase OS=Vibrio al... 33 9.2
tr|A7Q5P6|A7Q5P6_VITVI Chromosome undetermined scaffold_53, whol... 33 9.2
tr|B4DYQ9|B4DYQ9_HUMAN cDNA FLJ54485, highly similar to Sodium/c... 33 9.2
tr|Q2GTS4|Q2GTS4_CHAGB Putative uncharacterized protein OS=Chaet... 33 9.2
>tr|Q3BSV7|Q3BSV7_XANC5 Putative secreted protein OS=Xanthomonas
campestris pv. vesicatoria (strain 85-10) GN=XCV2425
PE=3 SV=1
Length = 605
Score = 37.0 bits (84), Expect = 0.49
Identities = 18/40 (45%), Positives = 20/40 (50%)
Frame = +3
Query: 186 PSSAHCATEHIEHQRQQAAEPCTLSQRPTPSGHGQQLTGA 305
P AH AT H Q Q P TL+ P+PS H LT A
Sbjct: 390 PDYAHLATPHFNAQMLQPGRPVTLNASPSPSPHAAPLTTA 429
>tr|B4FPI0|B4FPI0_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 221
Score = 36.2 bits (82), Expect = 0.84
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 7/69 (10%)
Frame = +3
Query: 117 LYSHVNNTATWAPMLAYDCPLMAPSS---AHCATEHIEHQRQQAAEPCT----LSQRPTP 275
L S V+NT TW +L+ CPL + H A H+EH+ A T L PT
Sbjct: 25 LVSFVDNTRTWERLLSRACPLCTTENMDELHAAAHHVEHEDGSEAIKATKFENLGSHPTL 84
Query: 276 SGHGQQLTG 302
Q+ G
Sbjct: 85 KPDIDQMEG 93
>tr|Q69PS1|Q69PS1_ORYSJ Putative uncharacterized protein
OSJNBb0039F24.31 (Putative uncharacterized protein
P0019A05.18) OS=Oryza sativa subsp. japonica
GN=OSJNBb0039F24.31 PE=4 SV=1
Length = 160
Score = 33.9 bits (76), Expect = 4.1
Identities = 22/71 (30%), Positives = 30/71 (42%)
Frame = +2
Query: 224 PAPTSGGTMHALAAPDTKRTWPTAHWSLHSALRCPIEVPFAI*IPRRPKLAFAYEFMHPP 403
P P G L P +RT A + A + +P A+ IP P +A AY HPP
Sbjct: 51 PPPPLSGRASPLLQPPLRRTIAAASIAAARATSAAVRLPCAVAIPLSPHVA-AYYCFHPP 109
Query: 404 CGTLSKSHPSL 436
+ + SL
Sbjct: 110 LAAATPTAVSL 120
>tr|A1DL02|A1DL02_NEOFI C2H2 finger domain protein, putative
OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
NRRL 181) GN=NFIA_048100 PE=4 SV=1
Length = 498
Score = 33.9 bits (76), Expect = 4.1
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +2
Query: 44 PNFPYPLPLNWGIDATNPSFKKVGPLQSREQHRHMGSHVSI*LSSNGTIKCPLCHRTHRA 223
P+F P P N+ I+ P + PLQS + H +H S+ N + P +
Sbjct: 101 PSFELPPP-NFQINVGTPKY----PLQS---NAHPPAHPSV----NSLLTPPASTQAGEV 148
Query: 224 PAPTSGG-TMHALAAPDTKRTWPTAHWSLHS 313
AP+S T A PD ++ TA+W HS
Sbjct: 149 TAPSSAAPTTTVSATPDVAPSYGTAYWQGHS 179
>tr|Q1V5A2|Q1V5A2_VIBAL Putative multicopper oxidase OS=Vibrio
alginolyticus 12G01 GN=V12G01_09988 PE=4 SV=1
Length = 460
Score = 32.7 bits (73), Expect = 9.2
Identities = 20/44 (45%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +2
Query: 290 TAHWSLHSALRCPIE---VPFAI*IPRRPKLAFAYEFMHPPCGT 412
T HW LR PIE VPF +P P F YEF P GT
Sbjct: 90 TIHWH---GLRIPIEMDGVPFLSQLPIMPGETFVYEFTPPDAGT 130
>tr|A7Q5P6|A7Q5P6_VITVI Chromosome undetermined scaffold_53, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00031037001 PE=4 SV=1
Length = 599
Score = 32.7 bits (73), Expect = 9.2
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +3
Query: 135 NTATWAPMLAYDCPLMAPSSAHCATEHIEHQRQQAAEPCTLSQRPTPSGHGQQLTGA 305
+++T +P+ ++ + +P TEH+EH+ Q + + PS HGQQ T A
Sbjct: 109 SSSTNSPVKSFPLSVDSPKHFEIKTEHVEHEDQSSTPAYGIMNH--PSSHGQQNTCA 163
>tr|B4DYQ9|B4DYQ9_HUMAN cDNA FLJ54485, highly similar to
Sodium/calcium exchanger 2 (Solute carrier family 8
(Sodium-calcium exchanger), member 2, isoform CRA_b)
OS=Homo sapiens GN=SLC8A2 PE=2 SV=1
Length = 921
Score = 32.7 bits (73), Expect = 9.2
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 6/51 (11%)
Frame = +3
Query: 237 AAEPCTLSQRPTPS------GHGQQLTGACTLPFDAQ*KCLLPYKYPDDPS 371
AA PC+ + PTPS TG C + Q LLP PDDPS
Sbjct: 14 AAPPCSGAATPTPSLPPPPANDSDTSTGGCQGSYRCQPGVLLPVWEPDDPS 64
>tr|Q2GTS4|Q2GTS4_CHAGB Putative uncharacterized protein
OS=Chaetomium globosum GN=CHGG_08630 PE=4 SV=1
Length = 282
Score = 32.7 bits (73), Expect = 9.2
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +2
Query: 137 HRHMGSHVSI*LSSNGTIKCPLCHRTHRAPAPTSGGTMHALAAPDTKRTWPT--AHWSLH 310
H H ++ + T+ CP C+R + APT GG+ + +AP T P H++
Sbjct: 41 HFHWQCLLNFSSTITSTLTCPSCNRHLPSNAPTGGGSSSSASAPPPTSTNPVILTHYTNE 100
Query: 311 SALRCPIEV-PF 343
++ +++ PF
Sbjct: 101 GGIQPSLDIYPF 112
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