BP917075 |
Clone id |
YMU001_000095_E12 |
Library |
YMU01 |
Length |
529 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000095_E12. |
Accession |
BP917075 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CTGAGTACCCAGCTCCAACAGTGCCTCACCGGGTGGGGGCCCCTTTAGGAGGGCTCGCTG GGGAAGGTCTATCTCGCACGAGGTCTGCAACCTGTTACTGGTTGCTCAGCAGACGACAAG GCTTGTGTACAAGGGCTTCTTTGGGAGAGGAGCACCCGACTGACCACCCCTTCCTAGTCT GTGTACTTAAGTGTAGCAATGGCCTATTTTTTTCCAAGAGGGCATGACGGCAACCCAGCT TTTCTTGAAGCTCAATTGTTTGCCCTAGTTTTTTGTTTGGAGTTGGACTCCTTGGTAGGT GGGGTTTGTGATAGCAGGATGGGCTTTGCCAAGTGGCTTTGAGGTATCTTCTAATGGGGT GGGCTCCCCTCAAGCCCATATTAACGGTGTTGTTCCTTGGCGGCACTGGGTTGTACAGAC GATGCATGGCTCCCCGTTAAAATCCTGAGGAGGATGGTGTTGATGTGTGTCTTTTCATCC GCTACATGTCGATAGCATGTGGGGGTGGTAGTAGGAGCTTACTTGCTTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5FWK3 |
Definition |
sp|Q5FWK3|RHG01_MOUSE Rho GTPase-activating protein 1 OS=Mus musculus |
Align length |
37 |
Score (bit) |
35.0 |
E-value |
0.22 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A8N822 |
Definition |
tr|A8N822|A8N822_COPC7 Predicted protein OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) |
Align length |
65 |
Score (bit) |
38.9 |
E-value |
0.16 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917075|Adiantum capillus-veneris mRNA, clone: YMU001_000095_E12. (529 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A8N822|A8N822_COPC7 Predicted protein OS=Coprinopsis cinerea ... 39 0.16 tr|Q8C5A0|Q8C5A0_MOUSE Putative uncharacterized protein OS=Mus m... 35 2.4 tr|Q8BQW4|Q8BQW4_MOUSE Putative uncharacterized protein OS=Mus m... 35 2.4 tr|A2AGT9|A2AGT9_MOUSE Rho GTPase activating protein 1 OS=Mus mu... 35 2.4 tr|A4GT58|A4GT58_CANFA Cdc42 GTPase-activating protein OS=Canis ... 35 2.4 tr|O15376|O15376_HUMAN CDC42 GAP-related protein (Fragment) OS=H... 35 2.4 tr|B4DPZ4|B4DPZ4_HUMAN cDNA FLJ60782, highly similar to Rho-GTPa... 35 2.4 tr|A5B8S2|A5B8S2_VITVI Putative uncharacterized protein OS=Vitis... 35 3.1 tr|A6RT40|A6RT40_BOTFB Putative uncharacterized protein OS=Botry... 35 3.1
>tr|A8N822|A8N822_COPC7 Predicted protein OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_11815 PE=4 SV=1 Length = 1136
Score = 38.9 bits (89), Expect = 0.16 Identities = 30/65 (46%), Positives = 36/65 (55%), Gaps = 3/65 (4%) Frame = -3
Query: 236 GLP-SCPLGKK*AIAT-LKYTD*EGVVSRV-LLSQRSPCTQALSSAEQPVTGCRPRAR*T 66 GLP S PL + A+ L Y D EGVV RV +LSQ SP + S AE P P +R + Sbjct: 677 GLPNSSPLSPSGSEASGLSYADEEGVVDRVDVLSQASPAQRGGSGAESPSNNRTPSSRSS 736
Query: 65 FPSEP 51 SEP Sbjct: 737 GESEP 741
>tr|Q8C5A0|Q8C5A0_MOUSE Putative uncharacterized protein OS=Mus musculus GN=Arhgap1 PE=2 SV=1 Length = 347
Score = 35.0 bits (79), Expect = 2.4 Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 1/37 (2%) Frame = -1
Query: 346 YLKATWQSPSCYHKPHLPRSPTPNKKLGQTIE-LQEK 239 +LK+T +SP+ KP PR P PN++ G +++ LQEK Sbjct: 124 FLKSTQKSPATAPKPMPPRPPLPNQQFGVSLQHLQEK 160
>tr|Q8BQW4|Q8BQW4_MOUSE Putative uncharacterized protein OS=Mus musculus GN=Arhgap1 PE=2 SV=1 Length = 479
Score = 35.0 bits (79), Expect = 2.4 Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 1/37 (2%) Frame = -1
Query: 346 YLKATWQSPSCYHKPHLPRSPTPNKKLGQTIE-LQEK 239 +LK+T +SP+ KP PR P PN++ G +++ LQEK Sbjct: 256 FLKSTQKSPATAPKPMPPRPPLPNQQFGVSLQHLQEK 292
>tr|A2AGT9|A2AGT9_MOUSE Rho GTPase activating protein 1 OS=Mus musculus GN=Arhgap1 PE=4 SV=1 Length = 479
Score = 35.0 bits (79), Expect = 2.4 Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 1/37 (2%) Frame = -1
Query: 346 YLKATWQSPSCYHKPHLPRSPTPNKKLGQTIE-LQEK 239 +LK+T +SP+ KP PR P PN++ G +++ LQEK Sbjct: 256 FLKSTQKSPATAPKPMPPRPPLPNQQFGVSLQHLQEK 292
>tr|A4GT58|A4GT58_CANFA Cdc42 GTPase-activating protein OS=Canis familiaris PE=2 SV=1 Length = 439
Score = 35.0 bits (79), Expect = 2.4 Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 1/37 (2%) Frame = -1
Query: 346 YLKATWQSPSCYHKPHLPRSPTPNKKLGQTIE-LQEK 239 +LK+T +SP+ KP PR P PN++ G +++ LQEK Sbjct: 216 FLKSTQKSPATAPKPMPPRPPLPNQQFGVSLQHLQEK 252
>tr|O15376|O15376_HUMAN CDC42 GAP-related protein (Fragment) OS=Homo sapiens PE=2 SV=1 Length = 223
Score = 35.0 bits (79), Expect = 2.4 Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 1/37 (2%) Frame = -1
Query: 346 YLKATWQSPSCYHKPHLPRSPTPNKKLGQTIE-LQEK 239 +LK+T +SP+ KP PR P PN++ G +++ LQEK Sbjct: 112 FLKSTQKSPATAPKPMPPRPPLPNQQFGVSLQHLQEK 148
>tr|B4DPZ4|B4DPZ4_HUMAN cDNA FLJ60782, highly similar to Rho-GTPase-activating protein 1 OS=Homo sapiens PE=2 SV=1 Length = 458
Score = 35.0 bits (79), Expect = 2.4 Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 1/37 (2%) Frame = -1
Query: 346 YLKATWQSPSCYHKPHLPRSPTPNKKLGQTIE-LQEK 239 +LK+T +SP+ KP PR P PN++ G +++ LQEK Sbjct: 216 FLKSTQKSPATAPKPMPPRPPLPNQQFGVSLQHLQEK 252
>tr|A5B8S2|A5B8S2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038408 PE=4 SV=1 Length = 92
Score = 34.7 bits (78), Expect = 3.1 Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%) Frame = -1
Query: 322 PSCYHKPHLPRSP-TPNKKLGQTIELQEKLGCRHALLEKNRPLL 194 P +HK +PR P ++LGQ +ELQ++ G ++L + RP L Sbjct: 47 PEAWHKVAMPRHVLAPRRRLGQGMELQQQQGGCRSMLPRQRPNL 90
>tr|A6RT40|A6RT40_BOTFB Putative uncharacterized protein OS=Botryotinia fuckeliana (strain B05.10) GN=BC1G_03776 PE=4 SV=1 Length = 458
Score = 34.7 bits (78), Expect = 3.1 Identities = 14/58 (24%), Positives = 26/58 (44%) Frame = +2
Query: 329 PSGFEVSSNGVGSPQAHINGVVPWRHWVVQTMHGSPLKS*GGWC*CVSFHPLHVDSMW 502 P F ++ NG+ +P N +PW + T+ SPL+ ++ P+ + W Sbjct: 117 PHPFILAGNGISAPYVSSNPPIPWMQTTISTLSSSPLRE-------INIRPVFYEGKW 167
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