BP917075
Clone id YMU001_000095_E12
Library
Length 529
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000095_E12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTGAGTACCCAGCTCCAACAGTGCCTCACCGGGTGGGGGCCCCTTTAGGAGGGCTCGCTG
GGGAAGGTCTATCTCGCACGAGGTCTGCAACCTGTTACTGGTTGCTCAGCAGACGACAAG
GCTTGTGTACAAGGGCTTCTTTGGGAGAGGAGCACCCGACTGACCACCCCTTCCTAGTCT
GTGTACTTAAGTGTAGCAATGGCCTATTTTTTTCCAAGAGGGCATGACGGCAACCCAGCT
TTTCTTGAAGCTCAATTGTTTGCCCTAGTTTTTTGTTTGGAGTTGGACTCCTTGGTAGGT
GGGGTTTGTGATAGCAGGATGGGCTTTGCCAAGTGGCTTTGAGGTATCTTCTAATGGGGT
GGGCTCCCCTCAAGCCCATATTAACGGTGTTGTTCCTTGGCGGCACTGGGTTGTACAGAC
GATGCATGGCTCCCCGTTAAAATCCTGAGGAGGATGGTGTTGATGTGTGTCTTTTCATCC
GCTACATGTCGATAGCATGTGGGGGTGGTAGTAGGAGCTTACTTGCTTG
■■Homology search results ■■ -
sp_hit_id Q5FWK3
Definition sp|Q5FWK3|RHG01_MOUSE Rho GTPase-activating protein 1 OS=Mus musculus
Align length 37
Score (bit) 35.0
E-value 0.22
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917075|Adiantum capillus-veneris mRNA, clone:
YMU001_000095_E12.
(529 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5FWK3|RHG01_MOUSE Rho GTPase-activating protein 1 OS=Mus mus... 35 0.22
sp|Q07960|RHG01_HUMAN Rho GTPase-activating protein 1 OS=Homo sa... 35 0.22
sp|Q96F81|DISP1_HUMAN Protein dispatched homolog 1 OS=Homo sapie... 32 2.5
sp|Q7SBU7|SPP2_NEUCR Pre-mRNA-splicing factor spp-2 OS=Neurospor... 31 3.2
sp|Q55CS8|LRDP1_DICDI Probable leucine-rich repeat-containing du... 31 4.2
sp|P76361|YEER_ECOLI Inner membrane protein yeeR OS=Escherichia ... 30 5.5
sp|Q06407|RGA2_YEAST Rho-type GTPase-activating protein 2 OS=Sac... 30 5.5
sp|Q07799|YL007_YEAST Uncharacterized protein YLL007C OS=Sacchar... 30 7.2
sp|Q8W234|SEUSS_ARATH Transcriptional corepressor SEUSS OS=Arabi... 30 7.2
sp|Q5AYL5|SEC16_EMENI COPII coat assembly protein sec16 OS=Emeri... 30 7.2
sp|Q8AV57|SDK2_CHICK Protein sidekick-2 OS=Gallus gallus GN=SDK2... 30 7.2
sp|Q9HC35|EMAL4_HUMAN Echinoderm microtubule-associated protein-... 30 9.4

>sp|Q5FWK3|RHG01_MOUSE Rho GTPase-activating protein 1 OS=Mus
musculus GN=Arhgap1 PE=1 SV=1
Length = 439

Score = 35.0 bits (79), Expect = 0.22
Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = -1

Query: 346 YLKATWQSPSCYHKPHLPRSPTPNKKLGQTIE-LQEK 239
+LK+T +SP+ KP PR P PN++ G +++ LQEK
Sbjct: 216 FLKSTQKSPATAPKPMPPRPPLPNQQFGVSLQHLQEK 252


>sp|Q07960|RHG01_HUMAN Rho GTPase-activating protein 1 OS=Homo
sapiens GN=ARHGAP1 PE=1 SV=1
Length = 439

Score = 35.0 bits (79), Expect = 0.22
Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = -1

Query: 346 YLKATWQSPSCYHKPHLPRSPTPNKKLGQTIE-LQEK 239
+LK+T +SP+ KP PR P PN++ G +++ LQEK
Sbjct: 216 FLKSTQKSPATAPKPMPPRPPLPNQQFGVSLQHLQEK 252


>sp|Q96F81|DISP1_HUMAN Protein dispatched homolog 1 OS=Homo sapiens
GN=DISP1 PE=2 SV=3
Length = 1524

Score = 31.6 bits (70), Expect = 2.5
Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 5/127 (3%)
Frame = -2

Query: 408 QCRQGTTPLIWA*GEPTPLEDTSKPL-GKAHPAITNPTYQGVQLQTKN*GKQLSFKKSW- 235
QC T+ + PL+ T + + G HP +Q + K G Q S +++
Sbjct: 1297 QCSPTTSSFVQIQNGVAPLKATHQAVEGFVHPITHIHHCPCLQGRVKPAGMQNSLPRNFF 1356

Query: 234 ---VAVMPSWKKIGHCYT*VHRLGRGGQSGAPLPKKPLYTSLVVC*ATSNRLQTSCEIDL 64
V + + +KIG T VH L R + P +P S VC +T + L+T C+ +
Sbjct: 1357 LHPVQHIQAQEKIGK--TNVHSLQRSIEEHLPKMAEP---SSFVCRSTGSLLKTCCDPEN 1411

Query: 63 PQRALLK 43
QR L K
Sbjct: 1412 KQRELCK 1418


>sp|Q7SBU7|SPP2_NEUCR Pre-mRNA-splicing factor spp-2 OS=Neurospora
crassa GN=spp-2 PE=3 SV=1
Length = 358

Score = 31.2 bits (69), Expect = 3.2
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -1

Query: 340 KATWQSPSCYHKPHLPRSPTPNKKLGQTIELQ 245
K+T + S +H PRSP+P +K QT+E Q
Sbjct: 176 KSTTTATSSFHHQRQPRSPSPEEKPPQTLEEQ 207


>sp|Q55CS8|LRDP1_DICDI Probable leucine-rich repeat-containing dual
specificity protein phosphatase DDB_G0270688
OS=Dictyostelium discoideum GN=DDB_G0270688 PE=3 SV=2
Length = 695

Score = 30.8 bits (68), Expect = 4.2
Identities = 25/88 (28%), Positives = 40/88 (45%)
Frame = -1

Query: 331 WQSPSCYHKPHLPRSPTPNKKLGQTIELQEKLGCRHALLEKNRPLLHLSTQTRKGWSVGC 152
+Q H+ LP+S N+KL E Q+K + E +P++ L+ T
Sbjct: 484 FQQQEIIHQEQLPQSKPENEKLTNIPEQQQKQQQQQQQQEVQQPIITLTKST-------- 535

Query: 151 SSPKEALVHKPCRLLSNQ*QVADLVRDR 68
SS E + P +L+ Q V DL+ D+
Sbjct: 536 SSKVEVEMIVPNQLIFWQSIVPDLIIDK 563


>sp|P76361|YEER_ECOLI Inner membrane protein yeeR OS=Escherichia
coli (strain K12) GN=yeeR PE=1 SV=2
Length = 510

Score = 30.4 bits (67), Expect = 5.5
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -2

Query: 516 SYYHPHMLSTCSG*KDTHQHHPPQDFNGEPCIVCTTQCRQGTT 388
S++H L C+ T HH P++ +P C++ CR+ T
Sbjct: 323 SFHHVDELRICASCGLTEVHHAPENHKPDPEWYCSSLCRETET 365


>sp|Q06407|RGA2_YEAST Rho-type GTPase-activating protein 2
OS=Saccharomyces cerevisiae GN=RGA2 PE=1 SV=1
Length = 1009

Score = 30.4 bits (67), Expect = 5.5
Identities = 35/131 (26%), Positives = 52/131 (39%), Gaps = 15/131 (11%)
Frame = -1

Query: 505 PPHAIDM*RMKRHTSTPSSSGF*RGAMHRLYNPVPP--RNNTVNMGLR-GAHPIRRYLKA 335
PPH + + + SS + + + N V P R +TV M + +R
Sbjct: 346 PPHGLALTLSEATKENNKSSQGIQTSTSKSMNHVSPITRTDTVEMKTSTSSSTLRLSDNG 405

Query: 334 TWQSPSCYHK--PHLPRSPTPNKKLGQTIELQEKLGCRHALLEKNRPLL-----HLST-- 182
++ P PH +P+PNKKL ++ L+ K H L K +L H ST
Sbjct: 406 SFSRPQTADNLLPHKKVAPSPNKKLSRSFSLKSK-NFVHNLKSKTSEMLDPKHPHHSTSI 464

Query: 181 ---QTRKGWSV 158
T GW V
Sbjct: 465 QESDTHSGWGV 475


>sp|Q07799|YL007_YEAST Uncharacterized protein YLL007C
OS=Saccharomyces cerevisiae GN=YLL007C PE=1 SV=1
Length = 665

Score = 30.0 bits (66), Expect = 7.2
Identities = 23/85 (27%), Positives = 38/85 (44%)
Frame = -1

Query: 328 QSPSCYHKPHLPRSPTPNKKLGQTIELQEKLGCRHALLEKNRPLLHLSTQTRKGWSVGCS 149
QS +CYH + NK L +T + EKL + LL + L + W++ C
Sbjct: 34 QSKACYH------TLISNKNLNKTSDEYEKLLANYILLCDEKYLCKTVIPDSRFWAILCD 87

Query: 148 SPKEALVHKPCRLLSNQ*QVADLVR 74
+ C+ L ++ VA+L+R
Sbjct: 88 N---------CQKLRSETLVANLIR 103


>sp|Q8W234|SEUSS_ARATH Transcriptional corepressor SEUSS
OS=Arabidopsis thaliana GN=SEU PE=1 SV=1
Length = 877

Score = 30.0 bits (66), Expect = 7.2
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -2

Query: 168 GGQSGAPLPKKPLYTSLV 115
GGQ GAPLP +P + SLV
Sbjct: 22 GGQGGAPLPSQPAFPSLV 39


>sp|Q5AYL5|SEC16_EMENI COPII coat assembly protein sec16 OS=Emericella
nidulans GN=sec16 PE=3 SV=1
Length = 1947

Score = 30.0 bits (66), Expect = 7.2
Identities = 33/158 (20%), Positives = 57/158 (36%)
Frame = -1

Query: 508 PPPHAIDM*RMKRHTSTPSSSGF*RGAMHRLYNPVPPRNNTVNMGLRGAHPIRRYLKATW 329
PPP A ++R+TS PS +P + T+ R + P+ + K ++
Sbjct: 762 PPPPAAASAPLQRYTSQPS--------------VIPGQTVTLPFQPRTSSPLAHHEKVSY 807

Query: 328 QSPSCYHKPHLPRSPTPNKKLGQTIELQEKLGCRHALLEKNRPLLHLSTQTRKGWSVGCS 149
Q KP P+ +P E + R + ++ + P + S +
Sbjct: 808 QPNEASRKPSFPQPTSPVTGQPSHTETAAPMSPRSSQVQASGP-----SAVDTSSSYQQT 862

Query: 148 SPKEALVHKPCRLLSNQ*QVADLVRDRPSPASPPKGAP 35
SP P L +V+ + PS +PP P
Sbjct: 863 SPPRNPYAPPSYLEEFSRRVSHVNNSTPSAYTPPPETP 900


tr_hit_id A8N822
Definition tr|A8N822|A8N822_COPC7 Predicted protein OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003)
Align length 65
Score (bit) 38.9
E-value 0.16
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917075|Adiantum capillus-veneris mRNA, clone:
YMU001_000095_E12.
(529 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A8N822|A8N822_COPC7 Predicted protein OS=Coprinopsis cinerea ... 39 0.16
tr|Q8C5A0|Q8C5A0_MOUSE Putative uncharacterized protein OS=Mus m... 35 2.4
tr|Q8BQW4|Q8BQW4_MOUSE Putative uncharacterized protein OS=Mus m... 35 2.4
tr|A2AGT9|A2AGT9_MOUSE Rho GTPase activating protein 1 OS=Mus mu... 35 2.4
tr|A4GT58|A4GT58_CANFA Cdc42 GTPase-activating protein OS=Canis ... 35 2.4
tr|O15376|O15376_HUMAN CDC42 GAP-related protein (Fragment) OS=H... 35 2.4
tr|B4DPZ4|B4DPZ4_HUMAN cDNA FLJ60782, highly similar to Rho-GTPa... 35 2.4
tr|A5B8S2|A5B8S2_VITVI Putative uncharacterized protein OS=Vitis... 35 3.1
tr|A6RT40|A6RT40_BOTFB Putative uncharacterized protein OS=Botry... 35 3.1

>tr|A8N822|A8N822_COPC7 Predicted protein OS=Coprinopsis cinerea
(strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_11815 PE=4
SV=1
Length = 1136

Score = 38.9 bits (89), Expect = 0.16
Identities = 30/65 (46%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = -3

Query: 236 GLP-SCPLGKK*AIAT-LKYTD*EGVVSRV-LLSQRSPCTQALSSAEQPVTGCRPRAR*T 66
GLP S PL + A+ L Y D EGVV RV +LSQ SP + S AE P P +R +
Sbjct: 677 GLPNSSPLSPSGSEASGLSYADEEGVVDRVDVLSQASPAQRGGSGAESPSNNRTPSSRSS 736

Query: 65 FPSEP 51
SEP
Sbjct: 737 GESEP 741


>tr|Q8C5A0|Q8C5A0_MOUSE Putative uncharacterized protein OS=Mus
musculus GN=Arhgap1 PE=2 SV=1
Length = 347

Score = 35.0 bits (79), Expect = 2.4
Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = -1

Query: 346 YLKATWQSPSCYHKPHLPRSPTPNKKLGQTIE-LQEK 239
+LK+T +SP+ KP PR P PN++ G +++ LQEK
Sbjct: 124 FLKSTQKSPATAPKPMPPRPPLPNQQFGVSLQHLQEK 160


>tr|Q8BQW4|Q8BQW4_MOUSE Putative uncharacterized protein OS=Mus
musculus GN=Arhgap1 PE=2 SV=1
Length = 479

Score = 35.0 bits (79), Expect = 2.4
Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = -1

Query: 346 YLKATWQSPSCYHKPHLPRSPTPNKKLGQTIE-LQEK 239
+LK+T +SP+ KP PR P PN++ G +++ LQEK
Sbjct: 256 FLKSTQKSPATAPKPMPPRPPLPNQQFGVSLQHLQEK 292


>tr|A2AGT9|A2AGT9_MOUSE Rho GTPase activating protein 1 OS=Mus
musculus GN=Arhgap1 PE=4 SV=1
Length = 479

Score = 35.0 bits (79), Expect = 2.4
Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = -1

Query: 346 YLKATWQSPSCYHKPHLPRSPTPNKKLGQTIE-LQEK 239
+LK+T +SP+ KP PR P PN++ G +++ LQEK
Sbjct: 256 FLKSTQKSPATAPKPMPPRPPLPNQQFGVSLQHLQEK 292


>tr|A4GT58|A4GT58_CANFA Cdc42 GTPase-activating protein OS=Canis
familiaris PE=2 SV=1
Length = 439

Score = 35.0 bits (79), Expect = 2.4
Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = -1

Query: 346 YLKATWQSPSCYHKPHLPRSPTPNKKLGQTIE-LQEK 239
+LK+T +SP+ KP PR P PN++ G +++ LQEK
Sbjct: 216 FLKSTQKSPATAPKPMPPRPPLPNQQFGVSLQHLQEK 252


>tr|O15376|O15376_HUMAN CDC42 GAP-related protein (Fragment) OS=Homo
sapiens PE=2 SV=1
Length = 223

Score = 35.0 bits (79), Expect = 2.4
Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = -1

Query: 346 YLKATWQSPSCYHKPHLPRSPTPNKKLGQTIE-LQEK 239
+LK+T +SP+ KP PR P PN++ G +++ LQEK
Sbjct: 112 FLKSTQKSPATAPKPMPPRPPLPNQQFGVSLQHLQEK 148


>tr|B4DPZ4|B4DPZ4_HUMAN cDNA FLJ60782, highly similar to
Rho-GTPase-activating protein 1 OS=Homo sapiens PE=2
SV=1
Length = 458

Score = 35.0 bits (79), Expect = 2.4
Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = -1

Query: 346 YLKATWQSPSCYHKPHLPRSPTPNKKLGQTIE-LQEK 239
+LK+T +SP+ KP PR P PN++ G +++ LQEK
Sbjct: 216 FLKSTQKSPATAPKPMPPRPPLPNQQFGVSLQHLQEK 252


>tr|A5B8S2|A5B8S2_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_038408 PE=4 SV=1
Length = 92

Score = 34.7 bits (78), Expect = 3.1
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = -1

Query: 322 PSCYHKPHLPRSP-TPNKKLGQTIELQEKLGCRHALLEKNRPLL 194
P +HK +PR P ++LGQ +ELQ++ G ++L + RP L
Sbjct: 47 PEAWHKVAMPRHVLAPRRRLGQGMELQQQQGGCRSMLPRQRPNL 90


>tr|A6RT40|A6RT40_BOTFB Putative uncharacterized protein
OS=Botryotinia fuckeliana (strain B05.10) GN=BC1G_03776
PE=4 SV=1
Length = 458

Score = 34.7 bits (78), Expect = 3.1
Identities = 14/58 (24%), Positives = 26/58 (44%)
Frame = +2

Query: 329 PSGFEVSSNGVGSPQAHINGVVPWRHWVVQTMHGSPLKS*GGWC*CVSFHPLHVDSMW 502
P F ++ NG+ +P N +PW + T+ SPL+ ++ P+ + W
Sbjct: 117 PHPFILAGNGISAPYVSSNPPIPWMQTTISTLSSSPLRE-------INIRPVFYEGKW 167