BP917072 |
Clone id |
YMU001_000095_E09 |
Library |
YMU01 |
Length |
516 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000095_E09. |
Accession |
BP917072 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GCAGTAGTCACCAAGTGCTTTAGTGTCCGAAAGCTCTCGTCGAGACACTCGTTCCAGACA ACAAGGGGATTACCTCTTACTGAATGACGGACCGTGAATTTTTTCGGGCCCATTTCACCC ACTCCATTTTAAAATGTTGCGTAATGCGGAGCAACAACTTTTGAGTAATCCTTGATAAAC TTGCGAAAGAATCCAGTAAAGCCTAAAAAGGACTTTACTTGGCGTATATTCTCCAGAATG GGCCAATTTCGCACCTTATCTAACTTTTCAGGGTCGACGCGAATTCCATCGCGAGTAATG ATGTGACCCAAATACAGAAGCTCTTTCTTAAAGAATTCGCACTTCGAAGCCTTAGCGTAA AGCTTCTAAGTTCTCAGTACTTCGAGAACAGTGCGTATATGCACTAGGTGCTCATAAAAA CTTCGGCTGTAAATCAAGATATCATCGAGAAATACAACAACGAAGTTGCCTAAAAATGGT CTCAGCAGATCATTCATCATCTGTTGGAACATAGTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P04323 |
Definition |
sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster |
Align length |
121 |
Score (bit) |
118.0 |
E-value |
2.0e-26 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
O64892 |
Definition |
tr|O64892|O64892_ANACO Polyprotein (Fragment) OS=Ananas comosus |
Align length |
171 |
Score (bit) |
143.0 |
E-value |
4.0e-33 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917072|Adiantum capillus-veneris mRNA, clone: YMU001_000095_E09. (516 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|O64892|O64892_ANACO Polyprotein (Fragment) OS=Ananas comosus ... 143 4e-33 tr|A5BJ41|A5BJ41_VITVI Putative uncharacterized protein OS=Vitis... 141 2e-32 tr|A5BEK1|A5BEK1_VITVI Putative uncharacterized protein OS=Vitis... 140 4e-32 tr|A5ADJ3|A5ADJ3_VITVI Putative uncharacterized protein OS=Vitis... 139 8e-32 tr|A4GMN4|A4GMN4_9POAL Gag-pol polyprotein (Fragment) OS=Panicum... 139 8e-32 tr|A2I5E5|A2I5E5_BETVU Retrotransposon protein OS=Beta vulgaris ... 138 1e-31 tr|Q84KB0|Q84KB0_CUCME Pol protein OS=Cucumis melo PE=4 SV=1 137 2e-31 tr|Q9LQH2|Q9LQH2_ARATH F15O4.13 OS=Arabidopsis thaliana PE=4 SV=1 137 3e-31 tr|Q9SY43|Q9SY43_ARATH Putative reverse transcriptase OS=Arabido... 136 5e-31 tr|Q7XX57|Q7XX57_ORYSJ OSJNBb0049I21.6 protein OS=Oryza sativa s... 136 5e-31 tr|Q2QUR6|Q2QUR6_ORYSJ Retrotransposon protein, putative, Ty3-gy... 136 5e-31 tr|Q2QTW2|Q2QTW2_ORYSJ Retrotransposon protein, putative, Ty3-gy... 136 7e-31 tr|A5JSC4|A5JSC4_MAIZE Polyprotein OS=Zea mays PE=4 SV=1 135 9e-31 tr|Q53PJ3|Q53PJ3_ORYSJ Retrotransposon protein, putative, Ty3-gy... 135 1e-30 tr|Q0KIS1|Q0KIS1_SOLDE Retrotransposon gag protein OS=Solanum de... 135 1e-30 tr|Q6B961|Q6B961_CANGA Polyprotein OS=Candida glabrata PE=4 SV=1 135 1e-30 tr|B4UN02|B4UN02_CANGA Encodes gag OS=Candida glabrata GN=CAGL0G... 135 1e-30 tr|Q9T0B7|Q9T0B7_ARATH Putative reverse-transcriptase-like prote... 135 2e-30 tr|Q9SJ92|Q9SJ92_ARATH Putative retroelement pol polyprotein OS=... 135 2e-30 tr|Q8S6V9|Q8S6V9_ORYSA Putative retroelement OS=Oryza sativa GN=... 134 2e-30 tr|Q7G6H1|Q7G6H1_ORYSJ Putative retroelement (Retrotransposon pr... 134 2e-30 tr|Q75HH6|Q75HH6_ORYSJ Putative polyprotein (Retrotransposon pro... 134 2e-30 tr|Q6L3S3|Q6L3S3_SOLDE Putative gag-pol polyprotein, identical O... 134 2e-30 tr|Q6L3S2|Q6L3S2_SOLDE Putative retrotransposon protein, identic... 134 2e-30 tr|Q2QSS9|Q2QSS9_ORYSJ Retrotransposon protein, putative, Ty3-gy... 134 2e-30 tr|Q0JKY7|Q0JKY7_ORYSJ Os01g0640000 protein OS=Oryza sativa subs... 134 2e-30 tr|Q7XUA3|Q7XUA3_ORYSJ OSJNBa0019D11.8 protein OS=Oryza sativa s... 134 3e-30 tr|Q7XSK7|Q7XSK7_ORYSJ Os04g0191000 protein OS=Oryza sativa subs... 134 3e-30 tr|Q6L3M7|Q6L3M7_SOLDE Gag-pol protein, putative OS=Solanum demi... 134 3e-30 tr|Q2RB45|Q2RB45_ORYSJ Retrotransposon protein, putative, Ty3-gy... 134 3e-30
>tr|O64892|O64892_ANACO Polyprotein (Fragment) OS=Ananas comosus PE=4 SV=1 Length = 871
Score = 143 bits (361), Expect = 4e-33 Identities = 69/171 (40%), Positives = 109/171 (63%) Frame = -2
Query: 515 TMFQQMMNDLLRPFLGNFVVVFLDDILIYSRSFYEHLVHIRTVLEVLRT*KLYAKASKCE 336 T F +MN + +P+L FVVVF+DDIL+YSRS +H H+R VL+VLR +LY K KCE Sbjct: 148 TAFMDLMNRVFKPYLDRFVVVFIDDILVYSRSDADHEEHLRIVLQVLREKELYVKLKKCE 207
Query: 335 FFKKELLYLGHIITRDGIRVDPEKLDKVRNWPILENIRQVKSFLGFTGFFRKFIKDYSKV 156 F+ +E+ +LGH+I+ GI VDP+K++ +++WP L ++ +++SFLG G++R+F++ ++K+ Sbjct: 208 FWLREVAFLGHLISGSGIAVDPKKIEAIKDWPRLTSVTEIRSFLGLAGYYRRFVERFAKL 267
Query: 155 VAPHYATF*NGVGEMGPKKFTVRHSVRGNPLVVWNECLDESFRTLKHLVTT 3 P GV KF +WN+ + SF+ LK +TT Sbjct: 268 STPLTRLTHKGV------KF------------IWNDACERSFQELKQRLTT 300
>tr|A5BJ41|A5BJ41_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_044100 PE=4 SV=1 Length = 1366
Score = 141 bits (355), Expect = 2e-32 Identities = 66/169 (39%), Positives = 106/169 (62%) Frame = -2
Query: 509 FQQMMNDLLRPFLGNFVVVFLDDILIYSRSFYEHLVHIRTVLEVLRT*KLYAKASKCEFF 330 FQ +MND+ +P+L F++VF DDIL+YS++ +H+ H++TVL++L+ +L+AK SKC F Sbjct: 664 FQSLMNDIFKPYLRKFILVFFDDILVYSKNLADHVYHLQTVLDILKQHQLFAKKSKCCFG 723
Query: 329 KKELLYLGHIITRDGIRVDPEKLDKVRNWPILENIRQVKSFLGFTGFFRKFIKDYSKVVA 150 E+ YLGH+I++DG++ DP K++ + NWP +++ ++ FLG TG++RKFIK Y + A Sbjct: 724 CSEIEYLGHLISKDGVQADPTKIEAMLNWPFPTSLKSLRGFLGLTGYYRKFIKGYGLIAA 783
Query: 149 PHYATF*NGVGEMGPKKFTVRHSVRGNPLVVWNECLDESFRTLKHLVTT 3 P KK + + W E +F+ LKH VT+ Sbjct: 784 PLTXLL---------KKNSFK----------WTESAKRAFQDLKHAVTS 813
>tr|A5BEK1|A5BEK1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026680 PE=4 SV=1 Length = 1469
Score = 140 bits (353), Expect = 4e-32 Identities = 68/171 (39%), Positives = 107/171 (62%) Frame = -2
Query: 515 TMFQQMMNDLLRPFLGNFVVVFLDDILIYSRSFYEHLVHIRTVLEVLRT*KLYAKASKCE 336 T FQ +MND+ +P+L F++VF DIL+YS+S +H+ H++TVL++L+ +L+AK SKC Sbjct: 695 TTFQSLMNDIFKPYLRKFILVFFYDILVYSKSLADHVHHLQTVLDILKQHQLFAKKSKCC 754
Query: 335 FFKKELLYLGHIITRDGIRVDPEKLDKVRNWPILENIRQVKSFLGFTGFFRKFIKDYSKV 156 F E+ YLGH+I++DG++ DP K++ + NWP +++ ++ FLG TG++RKFIK Y + Sbjct: 755 FGCSEIEYLGHLISKDGVQADPTKIEAMLNWPFPTSLKSLRGFLGLTGYYRKFIKGYGLI 814
Query: 155 VAPHYATF*NGVGEMGPKKFTVRHSVRGNPLVVWNECLDESFRTLKHLVTT 3 AP A KK + + W E +F+ LKH VT+ Sbjct: 815 AAPLTALL---------KKNSFK----------WTESAKRAFQDLKHDVTS 846
>tr|A5ADJ3|A5ADJ3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017554 PE=4 SV=1 Length = 2822
Score = 139 bits (350), Expect = 8e-32 Identities = 66/169 (39%), Positives = 107/169 (63%) Frame = -2
Query: 509 FQQMMNDLLRPFLGNFVVVFLDDILIYSRSFYEHLVHIRTVLEVLRT*KLYAKASKCEFF 330 FQ +MND+ +P+L F++VF DIL+YS++ +H+ H++TVL++L+ +L+AK SKC F Sbjct: 650 FQSLMNDIFKPYLRKFILVFFYDILVYSKNLADHVHHLQTVLDILKQHQLFAKKSKCCFG 709
Query: 329 KKELLYLGHIITRDGIRVDPEKLDKVRNWPILENIRQVKSFLGFTGFFRKFIKDYSKVVA 150 E+ YLGH+I++DG++ DP K++ + NWP +++ ++ FLG TG++RKFIK Y + A Sbjct: 710 CSEIEYLGHLISKDGVQADPTKIEAMLNWPFPTSLKSLRGFLGLTGYYRKFIKGYGLIAA 769
Query: 149 PHYATF*NGVGEMGPKKFTVRHSVRGNPLVVWNECLDESFRTLKHLVTT 3 P A KK + + W E ++F+ LKH VT+ Sbjct: 770 PLTALL---------KKNSFK----------WTESAKKAFQDLKHAVTS 799
>tr|A4GMN4|A4GMN4_9POAL Gag-pol polyprotein (Fragment) OS=Panicum virgatum PE=4 SV=1 Length = 276
Score = 139 bits (350), Expect = 8e-32 Identities = 69/169 (40%), Positives = 99/169 (58%) Frame = -2
Query: 509 FQQMMNDLLRPFLGNFVVVFLDDILIYSRSFYEHLVHIRTVLEVLRT*KLYAKASKCEFF 330 F ++MN++LR F+G FVVV+ DDILIYS+S EHL H+R V + LR LYA KC F Sbjct: 54 FMRLMNEVLRAFIGKFVVVYFDDILIYSKSHEEHLDHLRAVFDALRAASLYANLEKCIFC 113
Query: 329 KKELLYLGHIITRDGIRVDPEKLDKVRNWPILENIRQVKSFLGFTGFFRKFIKDYSKVVA 150 + +LG+++T GI VD K+D +R+WP + I QV+SFLG GF+R+F++D+S + A Sbjct: 114 TDRVAFLGYVVTPQGIEVDGAKIDAIRSWPTPQTITQVRSFLGLAGFYRRFVRDFSTIAA 173
Query: 149 PHYATF*NGVGEMGPKKFTVRHSVRGNPLVVWNECLDESFRTLKHLVTT 3 P + GV W D++F TLK +T+ Sbjct: 174 PLHELTKKGVS------------------FHWGPAQDQAFDTLKERLTS 204
>tr|A2I5E5|A2I5E5_BETVU Retrotransposon protein OS=Beta vulgaris PE=4 SV=1 Length = 1501
Score = 138 bits (348), Expect = 1e-31 Identities = 66/170 (38%), Positives = 104/170 (61%) Frame = -2
Query: 512 MFQQMMNDLLRPFLGNFVVVFLDDILIYSRSFYEHLVHIRTVLEVLRT*KLYAKASKCEF 333 +F +MN + FL FVVVF+DDILIYSR+ EH H+R +LE LR +LYAK SKCEF Sbjct: 692 IFMDLMNRIFHEFLDKFVVVFIDDILIYSRNETEHDEHLRIILETLRKNQLYAKFSKCEF 751
Query: 332 FKKELLYLGHIITRDGIRVDPEKLDKVRNWPILENIRQVKSFLGFTGFFRKFIKDYSKVV 153 +++ +LGH ++++G+ VDP K+ V WP +++ ++SFLG G++R+F++D+SK+ Sbjct: 752 RLEKVAFLGHFVSKEGVSVDPAKIQAVSEWPTPKSVTDIRSFLGLAGYYRRFVRDFSKIA 811
Query: 152 APHYATF*NGVGEMGPKKFTVRHSVRGNPLVVWNECLDESFRTLKHLVTT 3 P + + ++ WNE +E+F+ LK +TT Sbjct: 812 RP------------------MTNLMKKETKFEWNEKCEEAFQILKDRLTT 843
>tr|Q84KB0|Q84KB0_CUCME Pol protein OS=Cucumis melo PE=4 SV=1 Length = 923
Score = 137 bits (346), Expect = 2e-31 Identities = 66/170 (38%), Positives = 107/170 (62%) Frame = -2
Query: 512 MFQQMMNDLLRPFLGNFVVVFLDDILIYSRSFYEHLVHIRTVLEVLRT*KLYAKASKCEF 333 +F +MN + R FL FV+VF+DDILIYS++ EH H+R VL+ LR KLYAK SKCEF Sbjct: 125 VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEF 184
Query: 332 FKKELLYLGHIITRDGIRVDPEKLDKVRNWPILENIRQVKSFLGFTGFFRKFIKDYSKVV 153 + K++ +LGH++++ G+ VDP K++ V W + +V+SFLG G++R+F++++S++ Sbjct: 185 WLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIA 244
Query: 152 APHYATF*NGVGEMGPKKFTVRHSVRGNPLVVWNECLDESFRTLKHLVTT 3 P + + +G P VW++ ++SF+TLK + T Sbjct: 245 TP-----------------LTQLTRKGAPF-VWSKACEDSFQTLKQKLVT 276
>tr|Q9LQH2|Q9LQH2_ARATH F15O4.13 OS=Arabidopsis thaliana PE=4 SV=1 Length = 1887
Score = 137 bits (345), Expect = 3e-31 Identities = 64/168 (38%), Positives = 103/168 (61%) Frame = -2
Query: 509 FQQMMNDLLRPFLGNFVVVFLDDILIYSRSFYEHLVHIRTVLEVLRT*KLYAKASKCEFF 330 F ++MN +LR F+G FV+V+ DDIL+YS+S EH+ H++ VLEVLR KLYA KC F Sbjct: 1043 FMRLMNHVLRAFIGRFVIVYFDDILVYSKSLEEHVEHLKMVLEVLRKEKLYANLKKCTFG 1102
Query: 329 KKELLYLGHIITRDGIRVDPEKLDKVRNWPILENIRQVKSFLGFTGFFRKFIKDYSKVVA 150 L++LG +++ DG++VD EK+ +R WP +++ +V+SF G GF+R+F+KD+S + A Sbjct: 1103 TDNLVFLGFVVSTDGVKVDEEKVKAIREWPSPKSVGEVRSFHGLAGFYRRFVKDFSTLAA 1162
Query: 149 PHYATF*NGVGEMGPKKFTVRHSVRGNPLVVWNECLDESFRTLKHLVT 6 P + ++ N W + +++F+ LK +T Sbjct: 1163 P------------------LTEVIKKNVGFKWEQAQEDAFQALKEKLT 1192
>tr|Q9SY43|Q9SY43_ARATH Putative reverse transcriptase OS=Arabidopsis thaliana GN=T5L23.15 PE=2 SV=1 Length = 839
Score = 136 bits (343), Expect = 5e-31 Identities = 57/121 (47%), Positives = 91/121 (75%) Frame = -2
Query: 509 FQQMMNDLLRPFLGNFVVVFLDDILIYSRSFYEHLVHIRTVLEVLRT*KLYAKASKCEFF 330 F ++MN + + FL FV++F+DDIL+YS+S EH VH+R V+E LR KL+AK SKC F+ Sbjct: 549 FMRLMNSVFQEFLDEFVIIFIDDILVYSKSPEEHEVHLRRVMEKLREQKLFAKLSKCSFW 608
Query: 329 KKELLYLGHIITRDGIRVDPEKLDKVRNWPILENIRQVKSFLGFTGFFRKFIKDYSKVVA 150 ++E+ +LGHI++ +G+ VDPEK++ +R+WP N +++SFLG G++R+FIK ++ + Sbjct: 609 QREMGFLGHIVSAEGVSVDPEKIEAIRDWPRPTNATEIRSFLGLAGYYRRFIKGFASMAQ 668
Query: 149 P 147 P Sbjct: 669 P 669
>tr|Q7XX57|Q7XX57_ORYSJ OSJNBb0049I21.6 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0049I21.6 PE=4 SV=2 Length = 1606
Score = 136 bits (343), Expect = 5e-31 Identities = 69/169 (40%), Positives = 100/169 (59%) Frame = -2
Query: 509 FQQMMNDLLRPFLGNFVVVFLDDILIYSRSFYEHLVHIRTVLEVLRT*KLYAKASKCEFF 330 F +MN + +L FVVVF+DDILIYS+ EH H+R VLE LR KLYAK SKCEF+ Sbjct: 608 FMNLMNKVFMDYLDKFVVVFIDDILIYSKDEEEHAEHLRLVLEKLRKHKLYAKFSKCEFW 667
Query: 329 KKELLYLGHIITRDGIRVDPEKLDKVRNWPILENIRQVKSFLGFTGFFRKFIKDYSKVVA 150 KEL +LGH+I+ G+ VDP K++ V W +++ +++SFLG G++R+FI+ +SK+ Sbjct: 668 LKELAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIRSFLGLAGYYRRFIEGFSKIAR 727
Query: 149 PHYATF*NGVGEMGPKKFTVRHSVRGNPLVVWNECLDESFRTLKHLVTT 3 P + ++ VW+E ESF LK +T+ Sbjct: 728 P------------------MTQLLKKEKKFVWSEQCQESFEQLKEKLTS 758
|