BP917045
Clone id YMU001_000095_C04
Library
Length 474
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000095_C04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CCTTAGTCTTAGAAGTGGCCTTGTGAGCCTAGTCCACCTTGATCTCACCCTAATCACCCA
AGGAGTGGTCAAATCCGAACTATTTGCAGATAATTAAGTCATAGCTTATGCACCTTCTTC
GAAGCTCTACCCACATAATTAGCCTCTTCTTCACCATACTGTGTACTTTCTTGTTAAGTA
AACTTTGCCTTTTTATAACCTCAATCCGCTTGGTACATATTTAGTGTGTATATATATACT
GTACCTTTATAACCCATTTTGTAATTTTGAGTCGATTCCTGATTGTCCCCGTCAACTCCT
CAAGGCCTATAATACCTACGATATCTCTAGATGCATCTCGATCCTGTCACCCATGTTGTC
CCCTTCCACTTAGTAAGTGCCAAAATTTGTGCTTGCTATCGCCCCAATTCTATAAATCAG
TCATGTTATTTGTTGATGTCTTTGGCAATCGACACAGGCTAATAAAAGCTTTAT
■■Homology search results ■■ -
sp_hit_id Q10325
Definition sp|Q10325|MST2_SCHPO Histone acetyltransferase mst2 OS=Schizosaccharomyces pombe
Align length 21
Score (bit) 30.8
E-value 3.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917045|Adiantum capillus-veneris mRNA, clone:
YMU001_000095_C04.
(474 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q10325|MST2_SCHPO Histone acetyltransferase mst2 OS=Schizosac... 31 3.2
sp|P16718|VA28_SHEVK Viral replication protein A28-like OS=Sheep... 30 4.2
sp|Q8JTR0|VA28_LSDV Viral replication protein A28-like OS=Lumpy ... 30 4.2
sp|Q29CV2|MED26_DROPS Mediator of RNA polymerase II transcriptio... 30 7.1
sp|B2X1Z4|RPOC2_OEDCA DNA-directed RNA polymerase subunit beta''... 29 9.3
sp|P73662|PTA_SYNY3 Phosphate acetyltransferase OS=Synechocystis... 29 9.3
sp|P32739|NAD2_CAEEL Sodium-dependent high-affinity dicarboxylat... 29 9.3
sp|P68502|MTB_SALAL Metallothionein B OS=Salvelinus alpinus GN=m... 29 9.3
sp|P68501|MTB_ONCMY Metallothionein B OS=Oncorhynchus mykiss GN=... 29 9.3

>sp|Q10325|MST2_SCHPO Histone acetyltransferase mst2
OS=Schizosaccharomyces pombe GN=mst2 PE=2 SV=1
Length = 407

Score = 30.8 bits (68), Expect = 3.2
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3

Query: 378 CQNLCLLSPQFYKSVMLFVDV 440
CQNLCLL+ F S ML+ DV
Sbjct: 184 CQNLCLLAKMFLHSKMLYYDV 204


>sp|P16718|VA28_SHEVK Viral replication protein A28-like OS=Sheeppox
virus (strain KS-1) GN=HM3 PE=3 SV=1
Length = 140

Score = 30.4 bits (67), Expect = 4.2
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +2

Query: 209 LGTYLVCIYILYLYNPFCNFESIPDCPRQLLKAYNTYDISRCISILS 349
L T VCI I LY+ + N+++I ++ A++ ++ S+ ++ LS
Sbjct: 11 LSTVAVCIIIFQLYSIYLNYDNI----KEFNSAHSAFEFSKSVNTLS 53


>sp|Q8JTR0|VA28_LSDV Viral replication protein A28-like OS=Lumpy
skin disease virus GN=LSDV118 PE=3 SV=2
Length = 140

Score = 30.4 bits (67), Expect = 4.2
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +2

Query: 209 LGTYLVCIYILYLYNPFCNFESIPDCPRQLLKAYNTYDISRCISILS 349
L T VCI I LY+ + N+++I ++ A++ ++ S+ ++ LS
Sbjct: 11 LSTVAVCIIIFQLYSIYLNYDNI----KEFNSAHSAFEFSKSVNTLS 53


>sp|Q29CV2|MED26_DROPS Mediator of RNA polymerase II transcription
subunit 26 OS=Drosophila pseudoobscura pseudoobscura
GN=MED26 PE=3 SV=2
Length = 1602

Score = 29.6 bits (65), Expect = 7.1
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
Frame = +3

Query: 264 ILSRFLIVPVNSSRPIIPTISLDASRSCHPCCPLPLSKCQNLCLLSPQFYKS-----VML 428
I SR LI V S I S+ + P P S C + + SPQ ++ ++
Sbjct: 516 IQSRKLITAVQSPTSNISNSSISRELTTRALMPRPTSSCSDTSIHSPQIMETYSGNVTLM 575

Query: 429 FVDVFGNRH 455
VD F N++
Sbjct: 576 GVDKFSNKN 584


>sp|B2X1Z4|RPOC2_OEDCA DNA-directed RNA polymerase subunit beta''
OS=Oedogonium cardiacum GN=rpoC2 PE=3 SV=1
Length = 2617

Score = 29.3 bits (64), Expect = 9.3
Identities = 25/117 (21%), Positives = 49/117 (41%), Gaps = 2/117 (1%)
Frame = +2

Query: 23 VSLVHLDLTLITQGVVKSELFADN*VIAYAPSSKLYPHN*PLLHHTVYFLVK*TLPFYNL 202
V L + LTL + + ++ + N + +Y+ ++ +PH L+H +N
Sbjct: 800 VKLKYHSLTLKKKKGLSNQFYTYNCMNSYSSETRYFPHTSCFLNH------------FNN 847

Query: 203 NPLGTYLVCIY--ILYLYNPFCNFESIPDCPRQLLKAYNTYDISRCISILSPMLSPS 367
+ YL Y I + + PF C +Q L ++ + + LS +L P+
Sbjct: 848 EKINKYLNTNYSLIFFYFRPFI------QCEKQQLSQFHYINNKKYFDNLSLLLKPT 898


>sp|P73662|PTA_SYNY3 Phosphate acetyltransferase OS=Synechocystis
sp. (strain PCC 6803) GN=pta PE=3 SV=1
Length = 697

Score = 29.3 bits (64), Expect = 9.3
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2

Query: 269 ESIPDCPRQLLKAYNTYDISRCISILSPMLSPS 367
E +PD P LL + +T++ S + L P LSP+
Sbjct: 305 EGLPDAPPLLLTSTHTHETSARLETLHPALSPT 337


>sp|P32739|NAD2_CAEEL Sodium-dependent high-affinity dicarboxylate
transporter 2 OS=Caenorhabditis elegans GN=nac-2 PE=2
SV=3
Length = 551

Score = 29.3 bits (64), Expect = 9.3
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +3

Query: 129 THIISLFFTILCTFLLSKLCLFITSIRLVHI*CVYIYCTFITHFVILSRFLIVPVNSSRP 308
T +IS+ I+C FLL+ C+ ITS+ + + Y F + + +I NSS P
Sbjct: 495 TKVISMVEMIVCGFLLNIACILITSLNM----NTWTYFIFSLN-IFPENIVISSENSSYP 549

Query: 309 I 311
+
Sbjct: 550 V 550


>sp|P68502|MTB_SALAL Metallothionein B OS=Salvelinus alpinus GN=mtb
PE=3 SV=1
Length = 60

Score = 29.3 bits (64), Expect = 9.3
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3

Query: 339 RSCHPCCPLPLSKCQNLCL 395
+SC PCCP SKC + C+
Sbjct: 30 KSCCPCCPSDCSKCASGCV 48


>sp|P68501|MTB_ONCMY Metallothionein B OS=Oncorhynchus mykiss GN=mtb
PE=3 SV=1
Length = 60

Score = 29.3 bits (64), Expect = 9.3
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3

Query: 339 RSCHPCCPLPLSKCQNLCL 395
+SC PCCP SKC + C+
Sbjct: 30 KSCCPCCPSDCSKCASGCV 48


tr_hit_id Q4YFK5
Definition tr|Q4YFK5|Q4YFK5_PLABE Putative uncharacterized protein (Fragment) OS=Plasmodium berghei
Align length 85
Score (bit) 35.0
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917045|Adiantum capillus-veneris mRNA, clone:
YMU001_000095_C04.
(474 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q4YFK5|Q4YFK5_PLABE Putative uncharacterized protein (Fragmen... 35 1.9
tr|A7S9B8|A7S9B8_NEMVE Predicted protein (Fragment) OS=Nematoste... 34 4.2
tr|Q4AED0|Q4AED0_SIPCU Hypotaurocyamine kinase OS=Siphonosoma cu... 33 5.4
tr|A7RAB9|A7RAB9_MESMA NADH-ubiquinone oxidoreductase chain 4 OS... 33 5.4
tr|B8I6U6|B8I6U6_CLOCE Putative uncharacterized protein OS=Clost... 33 7.1

>tr|Q4YFK5|Q4YFK5_PLABE Putative uncharacterized protein (Fragment)
OS=Plasmodium berghei GN=PB404409.00.0 PE=4 SV=1
Length = 175

Score = 35.0 bits (79), Expect = 1.9
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Frame = +3

Query: 126 STHIISLFFTILCTFLLSKL-CLFITSIRL--VHI*CVYIYCTFITHFVILSRFLIVPVN 296
S H+ S+ F + S L CL++ + L +++ C YI FI+ I FL +P N
Sbjct: 11 SAHVYSVLFLLSLYLPCSYLPCLYLPCLYLPCLYLPCFYISLVFISPLFISPLFLYLPTN 70

Query: 297 S------SRPIIPTISLDASRSCHP 353
S + P P +SL + S HP
Sbjct: 71 SNPLSNNNPPSNPGLSLLYTLSSHP 95


>tr|A7S9B8|A7S9B8_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g109967 PE=4 SV=1
Length = 120

Score = 33.9 bits (76), Expect = 4.2
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 14/111 (12%)
Frame = +3

Query: 108 MHLLRSSTHIISLFFTILCTFLLSKLCLFITSIRLVHI*CVYIYCT----------FITH 257
MHLL T IS ++ ILCT L+ C+ + + V I YI C + H
Sbjct: 10 MHLLLLHTVCISSYY-ILCTSPLTTYCVHLLLLHTVCISSYYILCASPLTTYCIHLLLLH 68

Query: 258 FVILSRFLIV---PVNSSRPIIPTISLDASRSCHPCCPLPLSK-CQNLCLL 398
V +S + I+ P+ + +P + S + C PL+ C +L LL
Sbjct: 69 TVCISSYYILCASPLTTYCVHLPLLHTVCISSYYILCASPLTTYCVHLLLL 119


>tr|Q4AED0|Q4AED0_SIPCU Hypotaurocyamine kinase OS=Siphonosoma
cumanense GN=HTK PE=2 SV=1
Length = 356

Score = 33.5 bits (75), Expect = 5.4
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Frame = +2

Query: 131 PHN*PLLHHTVYFLVK*TLPFYNLNPLGTYLVCIYIL-------YLYNPFCNFESIPDCP 289
P N P+ H F LPF +L+P G Y++ + + P N + + DC
Sbjct: 89 PSNQPISHPAPNFGDLNNLPFNDLDPEGKYVISTRVRVGRSVDGIPFPPLINLQQVKDCE 148

Query: 290 RQLLKAYNTY 319
++L+ A T+
Sbjct: 149 QRLVSALKTF 158


>tr|A7RAB9|A7RAB9_MESMA NADH-ubiquinone oxidoreductase chain 4
OS=Mesobuthus martensii GN=ND4 PE=3 SV=1
Length = 438

Score = 33.5 bits (75), Expect = 5.4
Identities = 23/76 (30%), Positives = 41/76 (53%)
Frame = +3

Query: 108 MHLLRSSTHIISLFFTILCTFLLSKLCLFITSIRLVHI*CVYIYCTFITHFVILSRFLIV 287
M L S H+ S FF L +F L L +FI+++ ++ + +F+ +IL FL++
Sbjct: 34 MLFLPFSQHLSSFFFLDLLSFTLILLSIFISALMILSTSLLENKNSFLNITLILLFFLLL 93

Query: 288 PVNSSRPIIPTISLDA 335
+SS ++ IS +A
Sbjct: 94 SFSSSNLMLFYISFEA 109


>tr|B8I6U6|B8I6U6_CLOCE Putative uncharacterized protein
OS=Clostridium cellulolyticum H10 GN=Ccel_2610 PE=4 SV=1
Length = 330

Score = 33.1 bits (74), Expect = 7.1
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -3

Query: 238 YIYTH*ICTKRIEVIKRQSLLNKKVHSMVKKRLIMWVELRRRCIS--YDLIICK*FGF 71
YIY H I+V+ Q LLNKKVH + RLI R+ I Y+ +I F +
Sbjct: 130 YIYYHRRFETSIDVLMCQRLLNKKVHEIRIDRLISVTSKERKIIGEMYESVIDSVFNY 187