BP916972 |
Clone id |
YMU001_000094_B10 |
Library |
YMU01 |
Length |
198 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000094_B10. |
Accession |
BP916972 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2479Contig1 |
Sequence |
CCAAAAATCTAAAACGACTACCTTTCCAGCCAAATCCTTCTGTAACTTTAGAGGAGCTGT GTAGAGCCATTCTAGCTGTGGCTGAAATTCTGGAACCTGCTGTCCTCCCCCACGCTTCTC TAAATCCTCTATGTAGCTTAAAAATCTTGCAGTACGATCAGATTCAGCTGCTCCGCTAGC TACTGATGGTTGAAACAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5ZI67 |
Definition |
sp|Q5ZI67|NHLC2_CHICK NHL repeat-containing protein 2 OS=Gallus gallus |
Align length |
46 |
Score (bit) |
44.7 |
E-value |
0.0001 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SEV6 |
Definition |
tr|A9SEV6|A9SEV6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
64 |
Score (bit) |
81.6 |
E-value |
2.0e-14 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916972|Adiantum capillus-veneris mRNA, clone: YMU001_000094_B10. (198 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SEV6|A9SEV6_PHYPA Predicted protein OS=Physcomitrella paten... 82 2e-14 tr|A7PRQ1|A7PRQ1_VITVI Chromosome chr14 scaffold_27, whole genom... 75 2e-12 tr|Q9C7X1|Q9C7X1_ARATH Putative uncharacterized protein F13N6.21... 65 2e-09 tr|Q8VZ10|Q8VZ10_ARATH Putative uncharacterized protein At1g5650... 65 2e-09 tr|Q0DSF3|Q0DSF3_ORYSJ Os03g0311300 protein (Fragment) OS=Oryza ... 57 5e-07 tr|B8AI99|B8AI99_ORYSI Putative uncharacterized protein OS=Oryza... 57 5e-07 tr|A5BN38|A5BN38_VITVI Putative uncharacterized protein OS=Vitis... 54 4e-06 tr|Q4RG76|Q4RG76_TETNG Chromosome 2 SCAF15106, whole genome shot... 48 3e-04 tr|Q9CW64|Q9CW64_MOUSE Putative uncharacterized protein (Fragmen... 44 0.003 tr|B2RR26|B2RR26_MOUSE NHL repeat containing 2 OS=Mus musculus G... 44 0.003 tr|B7YUI2|B7YUI2_VARPD Redoxin domain protein OS=Variovorax para... 43 0.009 tr|B5WT22|B5WT22_9BURK Redoxin domain protein OS=Burkholderia sp... 40 0.076 tr|Q7NNM4|Q7NNM4_GLOVI Gll0387 protein OS=Gloeobacter violaceus ... 38 0.22 tr|B2IV07|B2IV07_NOSP7 Alkyl hydroperoxide reductase/ Thiol spec... 38 0.22 tr|B8A310|B8A310_MAIZE Putative uncharacterized protein OS=Zea m... 38 0.22 tr|Q13LA1|Q13LA1_BURXL Putative transmembrane protein OS=Burkhol... 36 1.1 tr|Q7Q8Q9|Q7Q8Q9_ANOGA AGAP010610-PA (Fragment) OS=Anopheles gam... 36 1.1 tr|A6T3C2|A6T3C2_JANMA Uncharacterized conserved protein OS=Jant... 35 1.4 tr|B2W1F1|B2W1F1_PYRTR Putative uncharacterized protein OS=Pyren... 35 1.9 tr|B2TD60|B2TD60_BURPP Redoxin domain protein OS=Burkholderia ph... 35 2.4 tr|A9AMI9|A9AMI9_BURM1 Redoxin domain protein (Putative uncharac... 35 2.4 tr|B2JUY0|B2JUY0_BURP8 Redoxin domain protein OS=Burkholderia ph... 34 3.2 tr|B1Z0N7|B1Z0N7_BURA4 Redoxin domain protein OS=Burkholderia am... 34 3.2 tr|A4JJQ1|A4JJQ1_BURVG Redoxin domain protein OS=Burkholderia vi... 34 3.2 tr|B1T267|B1T267_9BURK Redoxin domain protein OS=Burkholderia am... 34 3.2 tr|B1FCD4|B1FCD4_9BURK Redoxin domain protein OS=Burkholderia am... 34 3.2 tr|A6CB17|A6CB17_9PLAN Putative uncharacterized protein OS=Planc... 34 3.2 tr|A2WGH5|A2WGH5_9BURK Thiol-disulfide isomerase and thioredoxin... 34 3.2 tr|A8HUI8|A8HUI8_CHLRE Predicted protein OS=Chlamydomonas reinha... 34 3.2 tr|A7RH97|A7RH97_NEMVE Predicted protein OS=Nematostella vectens... 34 3.2
>tr|A9SEV6|A9SEV6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_128572 PE=4 SV=1 Length = 1040
Score = 81.6 bits (200), Expect = 2e-14 Identities = 40/64 (62%), Positives = 48/64 (75%) Frame = -1
Query: 192 QPSVASGAAESDRTARFLSYIEDLEKRGGGQQVPEFQPQLEWLYTAPLKLQKDLAGKVVV 13 QP +A+G S+R +F YI D+E + GQ VPEFQP+LEWL TAPL L+KDL GKVVV Sbjct: 344 QPLLANG---SERVRQFKQYITDIESKYAGQVVPEFQPKLEWLNTAPLSLKKDLKGKVVV 400
Query: 12 LDFW 1 LDFW Sbjct: 401 LDFW 404
>tr|A7PRQ1|A7PRQ1_VITVI Chromosome chr14 scaffold_27, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022589001 PE=4 SV=1 Length = 1054
Score = 74.7 bits (182), Expect = 2e-12 Identities = 33/58 (56%), Positives = 44/58 (75%) Frame = -1
Query: 174 GAAESDRTARFLSYIEDLEKRGGGQQVPEFQPQLEWLYTAPLKLQKDLAGKVVVLDFW 1 G +++ R +F++YI DLE RG VPEF QL+WL +APL+L++DL GKVVVLDFW Sbjct: 375 GESQTGRIQQFVNYISDLESRGNATTVPEFPSQLDWLNSAPLQLRRDLKGKVVVLDFW 432
>tr|Q9C7X1|Q9C7X1_ARATH Putative uncharacterized protein F13N6.21 OS=Arabidopsis thaliana GN=F13N6.21 PE=4 SV=1 Length = 1041
Score = 65.1 bits (157), Expect = 2e-09 Identities = 31/63 (49%), Positives = 40/63 (63%) Frame = -1
Query: 189 PSVASGAAESDRTARFLSYIEDLEKRGGGQQVPEFQPQLEWLYTAPLKLQKDLAGKVVVL 10 PS E R +F+ YI DLE + VPEF +L+WL TAPL+ ++DL GKVV+L Sbjct: 366 PSFTQNQGEG-RVQQFVDYIADLESKQTATTVPEFPSKLDWLNTAPLQFRRDLKGKVVIL 424
Query: 9 DFW 1 DFW Sbjct: 425 DFW 427
>tr|Q8VZ10|Q8VZ10_ARATH Putative uncharacterized protein At1g56500 OS=Arabidopsis thaliana GN=At1g56500 PE=2 SV=1 Length = 1055
Score = 65.1 bits (157), Expect = 2e-09 Identities = 31/63 (49%), Positives = 40/63 (63%) Frame = -1
Query: 189 PSVASGAAESDRTARFLSYIEDLEKRGGGQQVPEFQPQLEWLYTAPLKLQKDLAGKVVVL 10 PS E R +F+ YI DLE + VPEF +L+WL TAPL+ ++DL GKVV+L Sbjct: 366 PSFTQNQGEG-RVQQFVDYIADLESKQTATTVPEFPSKLDWLNTAPLQFRRDLKGKVVIL 424
Query: 9 DFW 1 DFW Sbjct: 425 DFW 427
>tr|Q0DSF3|Q0DSF3_ORYSJ Os03g0311300 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os03g0311300 PE=4 SV=1 Length = 425
Score = 57.0 bits (136), Expect = 5e-07 Identities = 26/58 (44%), Positives = 35/58 (60%) Frame = -1
Query: 174 GAAESDRTARFLSYIEDLEKRGGGQQVPEFQPQLEWLYTAPLKLQKDLAGKVVVLDFW 1 G + R + Y+ D E G VPEF +L+WL TAPL+ +DL G+VV+LDFW Sbjct: 64 GEQLTSRVQQIKKYLADFETGGSATCVPEFPRKLDWLNTAPLQFGRDLKGRVVLLDFW 121
>tr|B8AI99|B8AI99_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_07299 PE=4 SV=1 Length = 1103
Score = 57.0 bits (136), Expect = 5e-07 Identities = 26/58 (44%), Positives = 35/58 (60%) Frame = -1
Query: 174 GAAESDRTARFLSYIEDLEKRGGGQQVPEFQPQLEWLYTAPLKLQKDLAGKVVVLDFW 1 G + R + Y+ D E G VPEF +L+WL TAPL+ +DL G+VV+LDFW Sbjct: 387 GEQLTSRVQQIKKYLADFETGGSATCVPEFPRKLDWLNTAPLQFGRDLKGRVVLLDFW 444
>tr|A5BN38|A5BN38_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030553 PE=4 SV=1 Length = 659
Score = 53.9 bits (128), Expect = 4e-06 Identities = 26/58 (44%), Positives = 37/58 (63%) Frame = -1
Query: 174 GAAESDRTARFLSYIEDLEKRGGGQQVPEFQPQLEWLYTAPLKLQKDLAGKVVVLDFW 1 G +++ R +F++YI DLE F +WL +APL+L++DL GKVVVLDFW Sbjct: 405 GESQTGRIQQFVNYISDLES--------SFHLNFDWLNSAPLQLRRDLKGKVVVLDFW 454
>tr|Q4RG76|Q4RG76_TETNG Chromosome 2 SCAF15106, whole genome shotgun sequence OS=Tetraodon nigroviridis GN=GSTENG00034978001 PE=4 SV=1 Length = 805
Score = 47.8 bits (112), Expect = 3e-04 Identities = 24/46 (52%), Positives = 34/46 (73%), Gaps = 1/46 (2%) Frame = -1
Query: 135 YIEDLEKRGGGQQVPEFQPQLEWLYT-APLKLQKDLAGKVVVLDFW 1 Y++ L+ R ++P+FQP LEW+ T PL L K+LAGKVV+LDF+ Sbjct: 37 YLKTLDGRDD-LKIPDFQPALEWINTEGPLSLHKELAGKVVLLDFF 81
>tr|Q9CW64|Q9CW64_MOUSE Putative uncharacterized protein (Fragment) OS=Mus musculus GN=Nhlrc2 PE=2 SV=1 Length = 748
Score = 44.3 bits (103), Expect = 0.003 Identities = 26/45 (57%), Positives = 30/45 (66%), Gaps = 4/45 (8%) Frame = -1
Query: 123 LEKRGGGQQ---VPEFQPQLEWLYTA-PLKLQKDLAGKVVVLDFW 1 L+K G +Q VPEF LEWL T PL + KDL GKVVVLDF+ Sbjct: 65 LQKVDGWEQDLAVPEFPEGLEWLNTEEPLSIYKDLCGKVVVLDFF 109
>tr|B2RR26|B2RR26_MOUSE NHL repeat containing 2 OS=Mus musculus GN=Nhlrc2 PE=2 SV=1 Length = 725
Score = 44.3 bits (103), Expect = 0.003 Identities = 26/45 (57%), Positives = 30/45 (66%), Gaps = 4/45 (8%) Frame = -1
Query: 123 LEKRGGGQQ---VPEFQPQLEWLYTA-PLKLQKDLAGKVVVLDFW 1 L+K G +Q VPEF LEWL T PL + KDL GKVVVLDF+ Sbjct: 42 LQKVDGWEQDLAVPEFPEGLEWLNTEEPLSIYKDLCGKVVVLDFF 86
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