BP916874 |
Clone id |
YMU001_000093_A11 |
Library |
YMU01 |
Length |
481 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000093_A11. |
Accession |
BP916874 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL72Contig2 |
Sequence |
TGAGTCAATAACGTCACTCGAGAAGCTGTGGCAGATTCAGGTGAAAGAGCTGGAGGCTGT GCACTCTGGAGAAGTTTTGGACCTAGTTGCCCAGCACATGATTCTTGTTCTTGGTGGTCA AGGAGGTTCTGAGTACTTGGACCAAAATACTTTTGCACAAATAAGCAAGGTTCGAGTTGG ACAAGTGTACGCAGTTTCCATCATCTATGGCTATTTCCTTAGGAGAATTTTTCAGCGGTA TCAACTTGATAAGACTATCAAGATATTACCCTCCAAGGTCGACTTGGGTGAGAAGGCAGC AGACGTTGTCGATGAAGCCACACCTAGTAGCACACAGCAAGAGCAGATTGTCGCTGCAGC TATGTTTGCATTACGGGGCTTGGGAGGAGCTGGACCTGGTCCTGTACCAATTAGTGGTCC TAGACCATCCCCTACCAAGTTGCAGTCATATATTATGTCTATTGACACGGATATGCTTCA A |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A0RQI4 |
Definition |
sp|A0RQI4|RPOC_CAMFF DNA-directed RNA polymerase subunit beta' OS=Campylobacter fetus subsp. fetus (strain 82-40) |
Align length |
78 |
Score (bit) |
31.6 |
E-value |
2.0 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9LVJ0|Q9LVJ0_ARATH Gb |
Definition |
tr|Q9LVJ0|Q9LVJ0_ARATH Gb|AAF02142.1 (Putative uncharacterized protein At3g17800) OS=Arabidopsis thaliana |
Align length |
151 |
Score (bit) |
105.0 |
E-value |
1.0e-21 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916874|Adiantum capillus-veneris mRNA, clone: YMU001_000093_A11. (481 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9LVJ0|Q9LVJ0_ARATH Gb|AAF02142.1 (Putative uncharacterized p... 105 1e-21 tr|Q8W4L9|Q8W4L9_ARATH Putative uncharacterized protein At3g1780... 105 1e-21 tr|Q0WNF6|Q0WNF6_ARATH Putative uncharacterized protein At3g1780... 105 1e-21 tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea... 100 5e-20 tr|B7FJF5|B7FJF5_MEDTR Putative uncharacterized protein OS=Medic... 100 5e-20 tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, who... 98 2e-19 tr|Q9AT51|Q9AT51_BRANA Putative uncharacterized protein (Fragmen... 94 3e-18 tr|Q14K79|Q14K79_PLAAC Putative uncharacterized protein (Fragmen... 92 1e-17 tr|A9PIE4|A9PIE4_POPTR Putative uncharacterized protein OS=Popul... 92 1e-17 tr|A9PF86|A9PF86_POPTR Putative uncharacterized protein OS=Popul... 92 2e-17 tr|B6TEU7|B6TEU7_MAIZE Putative uncharacterized protein OS=Zea m... 89 1e-16 tr|B4G0A9|B4G0A9_MAIZE Putative uncharacterized protein OS=Zea m... 89 1e-16 tr|Q9LP80|Q9LP80_ARATH T1N15.6 (Putative uncharacterized protein... 86 7e-16 tr|Q10DW0|Q10DW0_ORYSJ Os03g0717900 protein OS=Oryza sativa subs... 84 5e-15 tr|Q10DV9|Q10DV9_ORYSJ cDNA clone:001-023-C09, full insert seque... 84 5e-15 tr|A5BNG8|A5BNG8_VITVI Putative uncharacterized protein OS=Vitis... 84 5e-15 tr|A3AM41|A3AM41_ORYSJ Putative uncharacterized protein OS=Oryza... 84 5e-15 tr|A2XLF0|A2XLF0_ORYSI Putative uncharacterized protein OS=Oryza... 84 5e-15 tr|Q2V4I1|Q2V4I1_ARATH Uncharacterized protein At1g48450.2 OS=Ar... 82 1e-14 tr|A7PSL3|A7PSL3_VITVI Chromosome chr6 scaffold_28, whole genome... 81 2e-14 tr|B8LKC1|B8LKC1_PICSI Putative uncharacterized protein OS=Picea... 79 9e-14 tr|A7PC12|A7PC12_VITVI Chromosome chr2 scaffold_11, whole genome... 78 2e-13 tr|A5AE17|A5AE17_VITVI Putative uncharacterized protein OS=Vitis... 78 2e-13 tr|Q9FVR1|Q9FVR1_ARATH Putative uncharacterized protein F3C3.6 (... 77 4e-13 tr|B6UFZ7|B6UFZ7_MAIZE Putative uncharacterized protein OS=Zea m... 74 3e-12 tr|Q7X6P4|Q7X6P4_ORYSA OSJNBa0006A01.21 protein (OSJNba0093F12.3... 74 5e-12 tr|Q0JAJ2|Q0JAJ2_ORYSJ Os04g0595100 protein OS=Oryza sativa subs... 74 5e-12 tr|B8ATK2|B8ATK2_ORYSI Putative uncharacterized protein OS=Oryza... 74 5e-12 tr|A4S3L6|A4S3L6_OSTLU Predicted protein OS=Ostreococcus lucimar... 70 4e-11 tr|A8IKK2|A8IKK2_CHLRE Predicted protein OS=Chlamydomonas reinha... 67 6e-10
>tr|Q9LVJ0|Q9LVJ0_ARATH Gb|AAF02142.1 (Putative uncharacterized protein At3g17800) OS=Arabidopsis thaliana GN=At3g17800 PE=2 SV=1 Length = 421
Score = 105 bits (261), Expect = 1e-21 Identities = 60/151 (39%), Positives = 91/151 (60%) Frame = +2
Query: 29 WQIQVKELEAVHSGEVLDLVAQHMILVLGGQGGSEYLDQNTFAQISKVRVGQVYAVSIIY 208 W +V++LE +HS E+ +++ H+ L+LG + G D N+ AQISK+RVGQVYA S++Y Sbjct: 202 WPTKVEKLERLHSPEMYEMIHNHLALILGSRMG----DLNSVAQISKLRVGQVYAASVMY 257
Query: 209 GYFLRRIFQRYQLDKTIKILPSKVDLGEKAADVVDEATPSSTQQEQIVAAAMFXXXXXXX 388 GYFL+R+ QR+QL+KT+KILP D ++ V++A ++T Q AA Sbjct: 258 GYFLKRVDQRFQLEKTMKILPGGSD---ESKTSVEQAEGTATYQ----AAVSSHPEVGAF 310
Query: 389 XXXXXVPISGPRPSPTKLQSYIMSIDTDMLQ 481 G P++L+SY+MS D + LQ Sbjct: 311 AGGVSAKGFGSEIKPSRLRSYVMSFDAETLQ 341
>tr|Q8W4L9|Q8W4L9_ARATH Putative uncharacterized protein At3g17800; MEB5.2 (Putative uncharacterized protein At3g17800) OS=Arabidopsis thaliana GN=At3g17800/MEB5.2 PE=2 SV=1 Length = 421
Score = 105 bits (261), Expect = 1e-21 Identities = 60/151 (39%), Positives = 91/151 (60%) Frame = +2
Query: 29 WQIQVKELEAVHSGEVLDLVAQHMILVLGGQGGSEYLDQNTFAQISKVRVGQVYAVSIIY 208 W +V++LE +HS E+ +++ H+ L+LG + G D N+ AQISK+RVGQVYA S++Y Sbjct: 202 WPTKVEKLERLHSPEMYEMIHNHLALILGSRMG----DLNSVAQISKLRVGQVYAASVMY 257
Query: 209 GYFLRRIFQRYQLDKTIKILPSKVDLGEKAADVVDEATPSSTQQEQIVAAAMFXXXXXXX 388 GYFL+R+ QR+QL+KT+KILP D ++ V++A ++T Q AA Sbjct: 258 GYFLKRVDQRFQLEKTMKILPGGSD---ESKTSVEQAEGTATYQ----AAVSSHPEVGAF 310
Query: 389 XXXXXVPISGPRPSPTKLQSYIMSIDTDMLQ 481 G P++L+SY+MS D + LQ Sbjct: 311 AGGVSAKGFGSEIKPSRLRSYVMSFDAETLQ 341
>tr|Q0WNF6|Q0WNF6_ARATH Putative uncharacterized protein At3g17800 OS=Arabidopsis thaliana GN=At3g17800 PE=2 SV=1 Length = 421
Score = 105 bits (261), Expect = 1e-21 Identities = 60/151 (39%), Positives = 91/151 (60%) Frame = +2
Query: 29 WQIQVKELEAVHSGEVLDLVAQHMILVLGGQGGSEYLDQNTFAQISKVRVGQVYAVSIIY 208 W +V++LE +HS E+ +++ H+ L+LG + G D N+ AQISK+RVGQVYA S++Y Sbjct: 202 WPTKVEKLERLHSPEMYEMIHNHLALILGSRMG----DLNSVAQISKLRVGQVYAASVMY 257
Query: 209 GYFLRRIFQRYQLDKTIKILPSKVDLGEKAADVVDEATPSSTQQEQIVAAAMFXXXXXXX 388 GYFL+R+ QR+QL+KT+KILP D ++ V++A ++T Q AA Sbjct: 258 GYFLKRVDQRFQLEKTMKILPGGSD---ESKTSVEQAEGTATYQ----AAVSSHPEVGAF 310
Query: 389 XXXXXVPISGPRPSPTKLQSYIMSIDTDMLQ 481 G P++L+SY+MS D + LQ Sbjct: 311 AGGVSAKGFGSEIKPSRLRSYVMSFDAETLQ 341
>tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 434
Score = 100 bits (248), Expect = 5e-20 Identities = 62/166 (37%), Positives = 91/166 (54%), Gaps = 6/166 (3%) Frame = +2
Query: 2 ESITSLEKLWQIQVKELEAVHSGEVLDLVAQHMILVLGGQGGSEYLDQNTFAQISKVRVG 181 + +T W Q +LE VHS E +++ H+ LVLG + LD ++ AQISK+RVG Sbjct: 194 DPVTGQIDTWPKQDHKLEGVHSSEAFEMIKNHLSLVLGNR----LLDSSSIAQISKLRVG 249
Query: 182 QVYAVSIIYGYFLRRIFQRYQLDKTIKILPSKVDLGEKAADVV--DEATPSSTQ---QEQ 346 QVYA S++YGYFLRR+ QR+QL+K++K LPS ++ A + D T Q Sbjct: 250 QVYAASVMYGYFLRRVDQRFQLEKSMKTLPSGLNEESDAEQTLGSDSKTKGEFQTRYSSP 309
Query: 347 IVAAAMFXXXXXXXXXXXXVPISGPR-PSPTKLQSYIMSIDTDMLQ 481 VA+A ++G R P KL++Y+MS + + LQ Sbjct: 310 QVASAAMPSIGTPSEPEFNPTVNGRRGVKPCKLRAYVMSFEPETLQ 355
>tr|B7FJF5|B7FJF5_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 421
Score = 100 bits (248), Expect = 5e-20 Identities = 57/152 (37%), Positives = 86/152 (56%), Gaps = 1/152 (0%) Frame = +2
Query: 29 WQIQVKELEAVHSGEVLDLVAQHMILVLGGQGGSEYLDQNTFAQISKVRVGQVYAVSIIY 208 W + +LE +HS E +++ H+ L+LG + G D ++ AQISK+RVGQVYA S++Y Sbjct: 197 WSNEDGKLEQLHSNEAYEMIQNHLALILGNRAG----DLSSVAQISKLRVGQVYAASVMY 252
Query: 209 GYFLRRIFQRYQLDKTIKILPSKVDLGEKAADVVDEATP-SSTQQEQIVAAAMFXXXXXX 385 GYFL+R+ QR+QL+K++K+L S D +VD+A P S Q+ + Sbjct: 253 GYFLKRVDQRFQLEKSMKVLTSASDDSSIHQTIVDDARPGSEVDTSQVTSHPEVSTWPGG 312
Query: 386 XXXXXXVPISGPRPSPTKLQSYIMSIDTDMLQ 481 G PT+L++Y+MS D D LQ Sbjct: 313 DVSPGGF---GYGIKPTRLRNYVMSFDGDTLQ 341
>tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006608001 PE=4 SV=1 Length = 362
Score = 98.2 bits (243), Expect = 2e-19 Identities = 59/154 (38%), Positives = 89/154 (57%), Gaps = 3/154 (1%) Frame = +2
Query: 29 WQIQVKELEAVHSGEVLDLVAQHMILVLGGQGGSEYLDQNTFAQISKVRVGQVYAVSIIY 208 W Q +LE +HS E +++ H+ L+LG + G D + AQISK+RVGQVYA S++Y Sbjct: 136 WPSQDGKLEQLHSPEAYEMIQNHLALILGNRLG----DSTSVAQISKLRVGQVYAASVMY 191
Query: 209 GYFLRRIFQRYQLDKTIKILPSKVDLGEKAA---DVVDEATPSSTQQEQIVAAAMFXXXX 379 GYFL+R+ QR+QL+KT+KILP +D G+K + + D+ TPS + + V Sbjct: 192 GYFLKRVDQRFQLEKTMKILPHALD-GDKGSVQEALWDKMTPSGS--DDSVQTVKSHPEV 248
Query: 380 XXXXXXXXVPISGPRPSPTKLQSYIMSIDTDMLQ 481 G P++L++Y+MS D + LQ Sbjct: 249 SSWAGGFTPGGFGHGIKPSRLRNYVMSFDAETLQ 282
>tr|Q9AT51|Q9AT51_BRANA Putative uncharacterized protein (Fragment) OS=Brassica napus PE=2 SV=1 Length = 256
Score = 94.4 bits (233), Expect = 3e-18 Identities = 51/151 (33%), Positives = 87/151 (57%) Frame = +2
Query: 29 WQIQVKELEAVHSGEVLDLVAQHMILVLGGQGGSEYLDQNTFAQISKVRVGQVYAVSIIY 208 W +V++LE +HS E+ +++ H+ L+LG + G D + AQISK+RVGQVYA S++Y Sbjct: 39 WPTKVEKLEKLHSSEMYEMIHNHLALILGPRMG----DLASVAQISKLRVGQVYAASVMY 94
Query: 209 GYFLRRIFQRYQLDKTIKILPSKVDLGEKAADVVDEATPSSTQQEQIVAAAMFXXXXXXX 388 GYFL+R+ QR+QL+K++K+L +D + + + + T + V + Sbjct: 95 GYFLKRVDQRFQLEKSMKLLTGGLDESKTSVEQPENVTFKAVSSHPEVGS---------F 145
Query: 389 XXXXXVPISGPRPSPTKLQSYIMSIDTDMLQ 481 G P++L++Y+MS D++ LQ Sbjct: 146 AGGVSAKGFGSEIKPSRLRTYVMSFDSETLQ 176
>tr|Q14K79|Q14K79_PLAAC Putative uncharacterized protein (Fragment) OS=Platanus acerifolia PE=2 SV=1 Length = 273
Score = 92.4 bits (228), Expect = 1e-17 Identities = 57/167 (34%), Positives = 89/167 (53%), Gaps = 16/167 (9%) Frame = +2
Query: 29 WQIQVKELEAVHSGEVLDLVAQHMILVLGGQGGSEYLDQNTFAQISKVRVGQVYAVSIIY 208 W Q ++L+ +HS E +++ H+ L+LG + + NT AQISK+RVGQVYA S++Y Sbjct: 53 WPGQEEKLKQLHSPEAYEMIQNHLALILGNR----VANSNTVAQISKLRVGQVYAASVMY 108
Query: 209 GYFLRRIFQRYQLDKTIKILP-----SKVDL-----------GEKAADVVDEATPSSTQQ 340 GYFL+R+ QR+QL+KT+KILP K D+ G KA+ ++ P + Q Sbjct: 109 GYFLKRVDQRFQLEKTMKILPFASDEEKSDIEQSVAEEMRPGGGKASAYAEQTHPEVSSQ 168
Query: 341 EQIVAAAMFXXXXXXXXXXXXVPISGPRPSPTKLQSYIMSIDTDMLQ 481 + F G P++L++Y+M+ D + LQ Sbjct: 169 PGNFSPGGF----------------GHGIKPSRLRTYVMAFDAETLQ 199
>tr|A9PIE4|A9PIE4_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 417
Score = 92.0 bits (227), Expect = 1e-17 Identities = 43/85 (50%), Positives = 62/85 (72%) Frame = +2
Query: 29 WQIQVKELEAVHSGEVLDLVAQHMILVLGGQGGSEYLDQNTFAQISKVRVGQVYAVSIIY 208 W Q ++LE +HS E +++ H+ L+LG + G D AQISK+R+GQVYA S++Y Sbjct: 193 WPSQDEKLEQLHSPEAYEMIQNHLTLILGNRVG----DSTAVAQISKLRIGQVYAASVMY 248
Query: 209 GYFLRRIFQRYQLDKTIKILPSKVD 283 GYFL+R+ QR+QL+KT+KILP+ VD Sbjct: 249 GYFLKRVDQRFQLEKTMKILPNGVD 273
>tr|A9PF86|A9PF86_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 401
Score = 91.7 bits (226), Expect = 2e-17 Identities = 44/85 (51%), Positives = 62/85 (72%) Frame = +2
Query: 38 QVKELEAVHSGEVLDLVAQHMILVLGGQGGSEYLDQNTFAQISKVRVGQVYAVSIIYGYF 217 Q ++LE +HS E D++ H+ L+LG + G D AQI+K+R GQVYA S++YGYF Sbjct: 196 QDEKLERLHSPEAYDMIQNHLALILGNRMG----DSTAVAQINKLRAGQVYAASVMYGYF 251
Query: 218 LRRIFQRYQLDKTIKILPSKVDLGE 292 L+R+ QR+QL+KT+KILP+ VD GE Sbjct: 252 LKRVDQRFQLEKTMKILPNAVDEGE 276
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