| BP916840 |
| Clone id |
YMU001_000092_D04 |
| Library |
YMU01 |
| Length |
437 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000092_D04. |
| Accession |
BP916840 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
- |
| Sequence |
TGAGAGCACTCTGAGTTTGAGGTACTGGAGGTACCCATCAGAGGCCGAAGAAGAGAAAGA
ATGTTATCTACAAAAAAAGGAAGCAGACTGCCCCACGTCGTGCAAAGGCCATTCCTCCCC
GTCGACCTCAAAAGCAACGCCGCTATAGCATTATCAAAAATGCACTGAACTACTGTACCG
ATAAGGAAGGCGCCCTTTGCAAGGCTCTGCAAAGAGGTGCACCAAGGCTACAACACGGGG
TTATGTATGGGTGTGGTGGCTCTGGAAGCGATCCAAGAGGCATCGGAGCAGTACCTCACA
AGTATTTTTGAGGACACTAACCTTTGTGCTATTCATGCCAAGAGGATAACCATTATGCCC
AGGATATGCAGCTTGTGAGGCGTTTGCACCATGAGCAATGAATTGTAACTACTTTGCAAA
TCCCAGTTTGTAATCAA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q6NXT2 |
| Definition |
sp|Q6NXT2|H3L_HUMAN Histone H3-like OS=Homo sapiens |
| Align length |
65 |
| Score (bit) |
78.6 |
| E-value |
4.0e-15 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916840|Adiantum capillus-veneris mRNA, clone:
YMU001_000092_D04.
(437 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q6NXT2|H3L_HUMAN Histone H3-like OS=Homo sapiens PE=2 SV=3 79 4e-15
sp|Q6P823|H33_XENTR Histone H3.3 OS=Xenopus tropicalis GN=TGas11... 79 5e-15
sp|Q6PI79|H33_XENLA Histone H3.3 OS=Xenopus laevis PE=1 SV=3 79 5e-15
sp|P84248|H33_SPISO Histone H3.3 OS=Spisula solidissima PE=1 SV=2 79 5e-15
sp|P84245|H33_RAT Histone H3.3 OS=Rattus norvegicus GN=H3f3b PE=... 79 5e-15
sp|P84246|H33_RABIT Histone H3.3 OS=Oryctolagus cuniculus GN=H3F... 79 5e-15
sp|Q71LE2|H33_PIG Histone H3.3 OS=Sus scrofa GN=H3F3A PE=2 SV=3 79 5e-15
sp|P84244|H33_MOUSE Histone H3.3 OS=Mus musculus GN=H3f3a PE=1 SV=2 79 5e-15
sp|P84243|H33_HUMAN Histone H3.3 OS=Homo sapiens GN=H3F3A PE=1 SV=2 79 5e-15
sp|P84249|H33_DROME Histone H3.3 OS=Drosophila melanogaster GN=H... 79 5e-15
sp|P84250|H33_DROHY Histone H3.3 OS=Drosophila hydei GN=His3.3A ... 79 5e-15
sp|Q6PI20|H33_DANRE Histone H3.3 OS=Danio rerio GN=h3f3a PE=2 SV=3 79 5e-15
sp|P84247|H33_CHICK Histone H3.3 OS=Gallus gallus GN=H3-IX PE=2 ... 79 5e-15
sp|Q5E9F8|H33_BOVIN Histone H3.3 OS=Bos taurus GN=H3F3A PE=1 SV=3 79 5e-15
sp|Q9U281|H332_CAEEL Histone H3.3 type 2 OS=Caenorhabditis elega... 79 5e-15
sp|Q10453|H331_CAEEL Histone H3.3 type 1 OS=Caenorhabditis elega... 79 5e-15
sp|Q5RCC9|H33_PONAB Histone H3.3 OS=Pongo abelii PE=2 SV=3 79 6e-15
sp|Q27532|H33L2_CAEEL Histone H3.3-like type 2 OS=Caenorhabditis... 78 9e-15
sp|Q9U7D1|H3_MASBA Histone H3 OS=Mastigamoeba balamuthi PE=2 SV=1 78 9e-15
sp|Q5MYA4|H32_CICIN Histone H3.2 OS=Cichorium intybus PE=2 SV=3 78 1e-14
sp|P84239|H3_URECA Histone H3 OS=Urechis caupo PE=3 SV=2 78 1e-14
sp|P84237|H3_TIGCA Histone H3 OS=Tigriopus californicus PE=3 SV=2 78 1e-14
sp|P84235|H3_PLADU Histone H3 OS=Platynereis dumerilii PE=3 SV=2 78 1e-14
sp|P02299|H3_DROME Histone H3 OS=Drosophila melanogaster GN=His3... 78 1e-14
sp|P84236|H3_DROHY Histone H3 OS=Drosophila hydei GN=His3 PE=3 SV=2 78 1e-14
sp|P84238|H3_CHITH Histone H3 OS=Chironomus thummi thummi PE=3 SV=2 78 1e-14
sp|P02302|H3L_XENLA Histone H3-like OS=Xenopus laevis PE=1 SV=2 78 1e-14
sp|Q8WSF1|H33_TRIPS Histone H3.3 OS=Trichinella pseudospiralis G... 78 1e-14
sp|Q28D37|H32_XENTR Histone H3.2 OS=Xenopus tropicalis GN=TGas08... 78 1e-14
sp|P84233|H32_XENLA Histone H3.2 OS=Xenopus laevis PE=1 SV=2 78 1e-14
>sp|Q6NXT2|H3L_HUMAN Histone H3-like OS=Homo sapiens PE=2 SV=3
Length = 135
Score = 78.6 bits (192), Expect(2) = 4e-15
Identities = 38/65 (58%), Positives = 47/65 (72%)
Frame = +1
Query: 169 TTVPIRKAPFARLCKEVHQGYNTGLCMGVVALEAIQEASEQYLTSIFEDTNLCAIHAKRI 348
T + IRK PF RL +E+ Q +NT L A+ A+QEASE YL + EDTNLCAIHAKR+
Sbjct: 58 TELLIRKLPFQRLVREIAQDFNTDLRFQSAAVGALQEASEAYLVGLLEDTNLCAIHAKRV 117
Query: 349 TIMPR 363
TIMP+
Sbjct: 118 TIMPK 122
Score = 21.6 bits (44), Expect(2) = 4e-15
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Frame = +2
Query: 92 PTSC--KGHS-SPSTSKATPL*HYQKCTELLYR 181
P++C K H P T + YQK TELL R
Sbjct: 31 PSTCGVKPHRYRPGTVALREIRRYQKSTELLIR 63
>sp|Q6P823|H33_XENTR Histone H3.3 OS=Xenopus tropicalis
GN=TGas113e22.1 PE=2 SV=3
Length = 136
Score = 79.0 bits (193), Expect(2) = 5e-15
Identities = 38/65 (58%), Positives = 47/65 (72%)
Frame = +1
Query: 169 TTVPIRKAPFARLCKEVHQGYNTGLCMGVVALEAIQEASEQYLTSIFEDTNLCAIHAKRI 348
T + IRK PF RL +E+ Q + T L A+ A+QEASE YL +FEDTNLCAIHAKR+
Sbjct: 59 TELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRV 118
Query: 349 TIMPR 363
TIMP+
Sbjct: 119 TIMPK 123
Score = 20.8 bits (42), Expect(2) = 5e-15
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 119 PSTSKATPL*HYQKCTELLYR 181
P T + YQK TELL R
Sbjct: 44 PGTVALREIRRYQKSTELLIR 64
>sp|Q6PI79|H33_XENLA Histone H3.3 OS=Xenopus laevis PE=1 SV=3
Length = 136
Score = 79.0 bits (193), Expect(2) = 5e-15
Identities = 38/65 (58%), Positives = 47/65 (72%)
Frame = +1
Query: 169 TTVPIRKAPFARLCKEVHQGYNTGLCMGVVALEAIQEASEQYLTSIFEDTNLCAIHAKRI 348
T + IRK PF RL +E+ Q + T L A+ A+QEASE YL +FEDTNLCAIHAKR+
Sbjct: 59 TELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRV 118
Query: 349 TIMPR 363
TIMP+
Sbjct: 119 TIMPK 123
Score = 20.8 bits (42), Expect(2) = 5e-15
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 119 PSTSKATPL*HYQKCTELLYR 181
P T + YQK TELL R
Sbjct: 44 PGTVALREIRRYQKSTELLIR 64
>sp|P84248|H33_SPISO Histone H3.3 OS=Spisula solidissima PE=1 SV=2
Length = 136
Score = 79.0 bits (193), Expect(2) = 5e-15
Identities = 38/65 (58%), Positives = 47/65 (72%)
Frame = +1
Query: 169 TTVPIRKAPFARLCKEVHQGYNTGLCMGVVALEAIQEASEQYLTSIFEDTNLCAIHAKRI 348
T + IRK PF RL +E+ Q + T L A+ A+QEASE YL +FEDTNLCAIHAKR+
Sbjct: 59 TELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRV 118
Query: 349 TIMPR 363
TIMP+
Sbjct: 119 TIMPK 123
Score = 20.8 bits (42), Expect(2) = 5e-15
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 119 PSTSKATPL*HYQKCTELLYR 181
P T + YQK TELL R
Sbjct: 44 PGTVALREIRRYQKSTELLIR 64
>sp|P84245|H33_RAT Histone H3.3 OS=Rattus norvegicus GN=H3f3b PE=1
SV=2
Length = 136
Score = 79.0 bits (193), Expect(2) = 5e-15
Identities = 38/65 (58%), Positives = 47/65 (72%)
Frame = +1
Query: 169 TTVPIRKAPFARLCKEVHQGYNTGLCMGVVALEAIQEASEQYLTSIFEDTNLCAIHAKRI 348
T + IRK PF RL +E+ Q + T L A+ A+QEASE YL +FEDTNLCAIHAKR+
Sbjct: 59 TELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRV 118
Query: 349 TIMPR 363
TIMP+
Sbjct: 119 TIMPK 123
Score = 20.8 bits (42), Expect(2) = 5e-15
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 119 PSTSKATPL*HYQKCTELLYR 181
P T + YQK TELL R
Sbjct: 44 PGTVALREIRRYQKSTELLIR 64
>sp|P84246|H33_RABIT Histone H3.3 OS=Oryctolagus cuniculus GN=H3F3A
PE=2 SV=2
Length = 136
Score = 79.0 bits (193), Expect(2) = 5e-15
Identities = 38/65 (58%), Positives = 47/65 (72%)
Frame = +1
Query: 169 TTVPIRKAPFARLCKEVHQGYNTGLCMGVVALEAIQEASEQYLTSIFEDTNLCAIHAKRI 348
T + IRK PF RL +E+ Q + T L A+ A+QEASE YL +FEDTNLCAIHAKR+
Sbjct: 59 TELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRV 118
Query: 349 TIMPR 363
TIMP+
Sbjct: 119 TIMPK 123
Score = 20.8 bits (42), Expect(2) = 5e-15
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 119 PSTSKATPL*HYQKCTELLYR 181
P T + YQK TELL R
Sbjct: 44 PGTVALREIRRYQKSTELLIR 64
>sp|Q71LE2|H33_PIG Histone H3.3 OS=Sus scrofa GN=H3F3A PE=2 SV=3
Length = 136
Score = 79.0 bits (193), Expect(2) = 5e-15
Identities = 38/65 (58%), Positives = 47/65 (72%)
Frame = +1
Query: 169 TTVPIRKAPFARLCKEVHQGYNTGLCMGVVALEAIQEASEQYLTSIFEDTNLCAIHAKRI 348
T + IRK PF RL +E+ Q + T L A+ A+QEASE YL +FEDTNLCAIHAKR+
Sbjct: 59 TELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRV 118
Query: 349 TIMPR 363
TIMP+
Sbjct: 119 TIMPK 123
Score = 20.8 bits (42), Expect(2) = 5e-15
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 119 PSTSKATPL*HYQKCTELLYR 181
P T + YQK TELL R
Sbjct: 44 PGTVALREIRRYQKSTELLIR 64
>sp|P84244|H33_MOUSE Histone H3.3 OS=Mus musculus GN=H3f3a PE=1 SV=2
Length = 136
Score = 79.0 bits (193), Expect(2) = 5e-15
Identities = 38/65 (58%), Positives = 47/65 (72%)
Frame = +1
Query: 169 TTVPIRKAPFARLCKEVHQGYNTGLCMGVVALEAIQEASEQYLTSIFEDTNLCAIHAKRI 348
T + IRK PF RL +E+ Q + T L A+ A+QEASE YL +FEDTNLCAIHAKR+
Sbjct: 59 TELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRV 118
Query: 349 TIMPR 363
TIMP+
Sbjct: 119 TIMPK 123
Score = 20.8 bits (42), Expect(2) = 5e-15
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 119 PSTSKATPL*HYQKCTELLYR 181
P T + YQK TELL R
Sbjct: 44 PGTVALREIRRYQKSTELLIR 64
>sp|P84243|H33_HUMAN Histone H3.3 OS=Homo sapiens GN=H3F3A PE=1 SV=2
Length = 136
Score = 79.0 bits (193), Expect(2) = 5e-15
Identities = 38/65 (58%), Positives = 47/65 (72%)
Frame = +1
Query: 169 TTVPIRKAPFARLCKEVHQGYNTGLCMGVVALEAIQEASEQYLTSIFEDTNLCAIHAKRI 348
T + IRK PF RL +E+ Q + T L A+ A+QEASE YL +FEDTNLCAIHAKR+
Sbjct: 59 TELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRV 118
Query: 349 TIMPR 363
TIMP+
Sbjct: 119 TIMPK 123
Score = 20.8 bits (42), Expect(2) = 5e-15
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 119 PSTSKATPL*HYQKCTELLYR 181
P T + YQK TELL R
Sbjct: 44 PGTVALREIRRYQKSTELLIR 64
>sp|P84249|H33_DROME Histone H3.3 OS=Drosophila melanogaster
GN=His3.3A PE=1 SV=2
Length = 136
Score = 79.0 bits (193), Expect(2) = 5e-15
Identities = 38/65 (58%), Positives = 47/65 (72%)
Frame = +1
Query: 169 TTVPIRKAPFARLCKEVHQGYNTGLCMGVVALEAIQEASEQYLTSIFEDTNLCAIHAKRI 348
T + IRK PF RL +E+ Q + T L A+ A+QEASE YL +FEDTNLCAIHAKR+
Sbjct: 59 TELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRV 118
Query: 349 TIMPR 363
TIMP+
Sbjct: 119 TIMPK 123
Score = 20.8 bits (42), Expect(2) = 5e-15
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 119 PSTSKATPL*HYQKCTELLYR 181
P T + YQK TELL R
Sbjct: 44 PGTVALREIRRYQKSTELLIR 64
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
B4IPK0 |
| Definition |
tr|B4IPK0|B4IPK0_DROSE GM18832 OS=Drosophila sechellia |
| Align length |
65 |
| Score (bit) |
77.8 |
| E-value |
1.0e-14 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916840|Adiantum capillus-veneris mRNA, clone:
YMU001_000092_D04.
(437 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|B4IPK0|B4IPK0_DROSE GM18832 OS=Drosophila sechellia GN=GM1883... 78 1e-14
tr|Q98TL3|Q98TL3_PLAFE Histone H3 (Fragment) OS=Platichthys fles... 82 1e-14
tr|A9X1D3|A9X1D3_PAPAN Histone H3 OS=Papio anubis GN=HIST1H3A PE... 82 2e-14
tr|Q6TXQ2|Q6TXQ2_RABIT Histone H3 (Fragment) OS=Oryctolagus cuni... 79 3e-14
tr|B8CC53|B8CC53_THAPS Histone H3 OS=Thalassiosira pseudonana CC... 80 5e-14
tr|Q5BQP1|Q5BQP1_9BIVA Histone H3 OS=Venerupis philippinarum PE=... 80 5e-14
tr|A9CSG2|A9CSG2_9MAGN Histone H3 (Fragment) OS=Vitis hybrid cul... 80 7e-14
tr|A5PK61|A5PK61_BOVIN Histone H3 OS=Bos taurus GN=LOC512741 PE=... 80 7e-14
tr|B0XDJ5|B0XDJ5_CULQU Histone H3 OS=Culex quinquefasciatus GN=C... 79 8e-14
tr|B0WTE0|B0WTE0_CULQU Histone H3 OS=Culex quinquefasciatus GN=C... 79 9e-14
tr|Q92068|Q92068_CHICK Histone H3 OS=Gallus gallus PE=3 SV=1 79 9e-14
tr|Q66VG2|Q66VG2_GECJA Histone H3 OS=Gecko japonicus PE=2 SV=1 79 9e-14
tr|Q4S9G0|Q4S9G0_TETNG Histone H3 OS=Tetraodon nigroviridis GN=G... 79 9e-14
tr|Q28FA2|Q28FA2_XENTR Histone H3 OS=Xenopus tropicalis GN=TEgg0... 79 9e-14
tr|B5G4Q1|B5G4Q1_TAEGU Putative H3 histone family 3B variant 1 O... 79 9e-14
tr|B5FZ57|B5FZ57_TAEGU Putative H3 histone family 3A OS=Taeniopy... 79 9e-14
tr|B5DG71|B5DG71_SALSA H3 histone family 3A OS=Salmo salar GN=h3... 79 9e-14
tr|A9JTR4|A9JTR4_XENTR Histone H3 OS=Xenopus tropicalis GN=h3f3b... 79 9e-14
tr|Q6QN07|Q6QN07_CHILA Histone H3 OS=Chinchilla lanigera PE=2 SV=1 79 9e-14
tr|B0BMY8|B0BMY8_RAT H3f3b protein OS=Rattus norvegicus GN=H3f3b... 79 9e-14
tr|A2A852|A2A852_MOUSE Histone H3 OS=Mus musculus GN=H3f3a PE=3 ... 79 9e-14
tr|Q5DWG7|Q5DWG7_CONCI Histone H3 OS=Conocephalum conicum GN=H3 ... 79 9e-14
tr|A9RA98|A9RA98_PAPAN Histone H3 OS=Papio anubis GN=HIST1H3A PE... 79 9e-14
tr|A5A6I2|A5A6I2_PANTR Histone H3 OS=Pan troglodytes verus GN=h3... 79 9e-14
tr|Q7PUQ8|Q7PUQ8_ANOGA Histone H3 OS=Anopheles gambiae GN=HIS3A ... 79 9e-14
tr|Q7PCS9|Q7PCS9_ANOGA Histone H3 OS=Anopheles gambiae GN=AGAP01... 79 9e-14
tr|Q6XIQ5|Q6XIQ5_DROYA Histone H3 (Fragment) OS=Drosophila yakub... 79 9e-14
tr|Q6KCE3|Q6KCE3_OIKDI Histone H3 OS=Oikopleura dioica GN=histon... 79 9e-14
tr|Q5BQN9|Q5BQN9_9BIVA Histone H3 OS=Venerupis philippinarum PE=... 79 9e-14
tr|Q2F687|Q2F687_BOMMO Histone H3 OS=Bombyx mori PE=2 SV=1 79 9e-14
>tr|B4IPK0|B4IPK0_DROSE GM18832 OS=Drosophila sechellia GN=GM18832
PE=4 SV=1
Length = 136
Score = 77.8 bits (190), Expect(2) = 1e-14
Identities = 38/65 (58%), Positives = 47/65 (72%)
Frame = +1
Query: 169 TTVPIRKAPFARLCKEVHQGYNTGLCMGVVALEAIQEASEQYLTSIFEDTNLCAIHAKRI 348
T + IRK PF RL +E+ Q + T L A+ A+QEASE YL +FEDTNLCAIHAKR+
Sbjct: 59 TELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRV 118
Query: 349 TIMPR 363
TIMP+
Sbjct: 119 TIMPK 123
Score = 24.6 bits (52), Expect(2) = 1e-14
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 119 PSTSKATPL*HYQKCTELLYR 181
P T + YQKCTELL R
Sbjct: 44 PGTVALREIRRYQKCTELLIR 64
>tr|Q98TL3|Q98TL3_PLAFE Histone H3 (Fragment) OS=Platichthys flesus
GN=h3.3 PE=2 SV=2
Length = 96
Score = 81.6 bits (200), Expect(2) = 1e-14
Identities = 39/65 (60%), Positives = 48/65 (73%)
Frame = +1
Query: 169 TTVPIRKAPFARLCKEVHQGYNTGLCMGVVALEAIQEASEQYLTSIFEDTNLCAIHAKRI 348
T + IRK PF RL +E+ QG+ T L A+ A+QEASE YL +FEDTNLCAIHAKR+
Sbjct: 19 TELLIRKLPFQRLVREIAQGFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRV 78
Query: 349 TIMPR 363
TIMP+
Sbjct: 79 TIMPK 83
Score = 20.8 bits (42), Expect(2) = 1e-14
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 119 PSTSKATPL*HYQKCTELLYR 181
P T + YQK TELL R
Sbjct: 4 PGTVALREIRRYQKSTELLIR 24
>tr|A9X1D3|A9X1D3_PAPAN Histone H3 OS=Papio anubis GN=HIST1H3A PE=3
SV=1
Length = 136
Score = 81.6 bits (200), Expect = 2e-14
Identities = 39/65 (60%), Positives = 48/65 (73%)
Frame = +1
Query: 169 TTVPIRKAPFARLCKEVHQGYNTGLCMGVVALEAIQEASEQYLTSIFEDTNLCAIHAKRI 348
T + IRK PF RL +E+ QG+ T L A+ A+QEASE YL +FEDTNLCAIHAKR+
Sbjct: 59 TELLIRKLPFQRLVREIAQGFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRV 118
Query: 349 TIMPR 363
TIMP+
Sbjct: 119 TIMPK 123
>tr|Q6TXQ2|Q6TXQ2_RABIT Histone H3 (Fragment) OS=Oryctolagus
cuniculus PE=3 SV=1
Length = 107
Score = 79.0 bits (193), Expect(2) = 3e-14
Identities = 38/64 (59%), Positives = 46/64 (71%)
Frame = +1
Query: 169 TTVPIRKAPFARLCKEVHQGYNTGLCMGVVALEAIQEASEQYLTSIFEDTNLCAIHAKRI 348
T + IRK PF RL +E+ Q + T L A+ A+QEASE YL +FEDTNLCAIHAKR+
Sbjct: 44 TELLIRKLPFQRLVREIAQDFKTDLLFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRV 103
Query: 349 TIMP 360
TIMP
Sbjct: 104 TIMP 107
Score = 22.3 bits (46), Expect(2) = 3e-14
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 119 PSTSKATPL*HYQKCTELLYR 181
PST + YQK TELL R
Sbjct: 29 PSTVALREIRRYQKSTELLIR 49
>tr|B8CC53|B8CC53_THAPS Histone H3 OS=Thalassiosira pseudonana
CCMP1335 GN=THAPSDRAFT_29950 PE=4 SV=1
Length = 136
Score = 80.1 bits (196), Expect = 5e-14
Identities = 39/65 (60%), Positives = 48/65 (73%)
Frame = +1
Query: 169 TTVPIRKAPFARLCKEVHQGYNTGLCMGVVALEAIQEASEQYLTSIFEDTNLCAIHAKRI 348
T + IRKAPF RL +E+ Q + T L A+ A+QEASE YL +FEDTNLCAIHAKR+
Sbjct: 59 TDLLIRKAPFQRLVREIAQDFKTDLRFQSTAVLALQEASEAYLVGLFEDTNLCAIHAKRV 118
Query: 349 TIMPR 363
TIMP+
Sbjct: 119 TIMPK 123
>tr|Q5BQP1|Q5BQP1_9BIVA Histone H3 OS=Venerupis philippinarum PE=2
SV=1
Length = 136
Score = 79.7 bits (195), Expect(2) = 5e-14
Identities = 38/65 (58%), Positives = 48/65 (73%)
Frame = +1
Query: 169 TTVPIRKAPFARLCKEVHQGYNTGLCMGVVALEAIQEASEQYLTSIFEDTNLCAIHAKRI 348
T + IRK PF RL +E+ Q + T L + A+ A+QEASE YL +FEDTNLCAIHAKR+
Sbjct: 59 TELLIRKLPFQRLVREIAQDFKTDLRLQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRV 118
Query: 349 TIMPR 363
TIMP+
Sbjct: 119 TIMPK 123
Score = 20.8 bits (42), Expect(2) = 5e-14
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 119 PSTSKATPL*HYQKCTELLYR 181
P T + YQK TELL R
Sbjct: 44 PGTVALREIRRYQKSTELLIR 64
>tr|A9CSG2|A9CSG2_9MAGN Histone H3 (Fragment) OS=Vitis hybrid
cultivar GN=Tam H3 PE=2 SV=1
Length = 139
Score = 79.7 bits (195), Expect = 7e-14
Identities = 49/115 (42%), Positives = 66/115 (57%), Gaps = 5/115 (4%)
Frame = +1
Query: 34 PIRGRRRERMLSTK---KGSRLPHVVQRP--FLPVDLKSNAAIALSKMH*TTVPIRKAPF 198
P+ GR + L+TK K + V++P F P + K T + IRK PF
Sbjct: 14 PLEGRLHAKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS--TELLIRKLPF 71
Query: 199 ARLCKEVHQGYNTGLCMGVVALEAIQEASEQYLTSIFEDTNLCAIHAKRITIMPR 363
RL +E+ Q + T L A+ A+QEA+E YL +FEDTNLCAIHAKR+TIMP+
Sbjct: 72 QRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPK 126
>tr|A5PK61|A5PK61_BOVIN Histone H3 OS=Bos taurus GN=LOC512741 PE=2
SV=1
Length = 136
Score = 79.7 bits (195), Expect = 7e-14
Identities = 38/65 (58%), Positives = 47/65 (72%)
Frame = +1
Query: 169 TTVPIRKAPFARLCKEVHQGYNTGLCMGVVALEAIQEASEQYLTSIFEDTNLCAIHAKRI 348
T + IRK PF RL +E+ Q + T L A+ A+QEASE YL +FEDTNLCAIHAKR+
Sbjct: 59 TELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRV 118
Query: 349 TIMPR 363
T+MPR
Sbjct: 119 TVMPR 123
>tr|B0XDJ5|B0XDJ5_CULQU Histone H3 OS=Culex quinquefasciatus
GN=CpipJ_CPIJ017395 PE=3 SV=1
Length = 161
Score = 79.0 bits (193), Expect(2) = 8e-14
Identities = 38/65 (58%), Positives = 47/65 (72%)
Frame = +1
Query: 169 TTVPIRKAPFARLCKEVHQGYNTGLCMGVVALEAIQEASEQYLTSIFEDTNLCAIHAKRI 348
T + IRK PF RL +E+ Q + T L A+ A+QEASE YL +FEDTNLCAIHAKR+
Sbjct: 84 TELLIRKLPFQRLVREIAQDFKTDLRFQSAAVAALQEASEAYLVGLFEDTNLCAIHAKRV 143
Query: 349 TIMPR 363
TIMP+
Sbjct: 144 TIMPK 148
Score = 20.8 bits (42), Expect(2) = 8e-14
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 119 PSTSKATPL*HYQKCTELLYR 181
P T + YQK TELL R
Sbjct: 69 PGTVALREIRRYQKSTELLIR 89
>tr|B0WTE0|B0WTE0_CULQU Histone H3 OS=Culex quinquefasciatus
GN=CpipJ_CPIJ010364 PE=3 SV=1
Length = 145
Score = 79.0 bits (193), Expect(2) = 9e-14
Identities = 38/65 (58%), Positives = 47/65 (72%)
Frame = +1
Query: 169 TTVPIRKAPFARLCKEVHQGYNTGLCMGVVALEAIQEASEQYLTSIFEDTNLCAIHAKRI 348
T + IRK PF RL +E+ Q + T L A+ A+QEASE YL +FEDTNLCAIHAKR+
Sbjct: 68 TELLIRKLPFQRLVREIAQDFKTDLRFQSAAVAALQEASEAYLVGLFEDTNLCAIHAKRV 127
Query: 349 TIMPR 363
TIMP+
Sbjct: 128 TIMPK 132
Score = 20.8 bits (42), Expect(2) = 9e-14
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 119 PSTSKATPL*HYQKCTELLYR 181
P T + YQK TELL R
Sbjct: 53 PGTVALREIRRYQKSTELLIR 73
|