BP916834
Clone id YMU001_000092_C07
Library
Length 418
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000092_C07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TCATGCTGCAAAATCATGAGCACCATAATTGTGACCAAATACCTACAATGCCTCCTTTGT
TGATGCACACTAGCCCCCCCGTTTTTTGCAATGCTAACCTACACACTTGTTCACCTACAA
TGAATTGCTATTTTGCTCTTCCTCATAGCTCAGCTCACTTGCCTTACTATCTTTGTATTT
TCATCTTTGTAAGTACTCTTTATGTTGGCTATCCTAGCTAGTCACACTCTCAATACACAA
TCCATCCTAGTCTAATCCATTATCATGTCTTGGATGCATCAAGAATCATGAAACTCAACA
AGCACTTTCTCCCCAACCATGCTTTTCTCCATACCCTTCACTTCCATGTGCATGACACAA
AGATGCACTTGCCCATGCTTTAGTTCCTTCTATACTTGCTTCCCTTTCATCTCATCCT
■■Homology search results ■■ -
sp_hit_id A8MXV6
Definition sp|A8MXV6|CD15L_HUMAN CMT1A duplicated region transcript 15 protein-like protein OS=Homo sapiens
Align length 28
Score (bit) 29.6
E-value 4.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916834|Adiantum capillus-veneris mRNA, clone:
YMU001_000092_C07.
(418 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A8MXV6|CD15L_HUMAN CMT1A duplicated region transcript 15 prot... 30 4.9
sp|Q9VFB7|TPC10_DROME Trafficking protein particle complex subun... 30 4.9
sp|Q8BXQ2|PIGT_MOUSE GPI transamidase component PIG-T OS=Mus mus... 29 6.4
sp|Q969N2|PIGT_HUMAN GPI transamidase component PIG-T OS=Homo sa... 29 6.4
sp|P70753|BGAL_ACTPL Beta-galactosidase OS=Actinobacillus pleuro... 29 6.4
sp|Q684R7|FREM1_MOUSE FRAS1-related extracellular matrix protein... 29 8.4

>sp|A8MXV6|CD15L_HUMAN CMT1A duplicated region transcript 15
protein-like protein OS=Homo sapiens GN=CDRT15L1 PE=2
SV=1
Length = 281

Score = 29.6 bits (65), Expect = 4.9
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -2

Query: 390 EGTKAWASASLCHAHGSEGYGEKHGWGE 307
EG + A AS HA S G+G KHG G+
Sbjct: 161 EGVTSTAPASRSHAAPSPGHGGKHGGGD 188


>sp|Q9VFB7|TPC10_DROME Trafficking protein particle complex subunit 10
OS=Drosophila melanogaster GN=CG6623 PE=2 SV=1
Length = 1145

Score = 29.6 bits (65), Expect = 4.9
Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
Frame = +3

Query: 9 QNHEHH---NCDQIPTMPPLLMHTSPPVFCNANLHTCSPTMNCYFALPHSSAHL 161
++HEHH NC T P+ + P + LHTC + AHL
Sbjct: 875 KHHEHHIALNCPWSRTELPIAVDFQPAMEATCRLHTCGTQKFLQVIMKGMEAHL 928


>sp|Q8BXQ2|PIGT_MOUSE GPI transamidase component PIG-T OS=Mus
musculus GN=Pigt PE=2 SV=2
Length = 582

Score = 29.3 bits (64), Expect = 6.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1

Query: 313 PTMLFSIPFTSMCMTQRCTCPCFSSFY 393
PT FS+P+ +C+T C+ SFY
Sbjct: 522 PTPDFSMPYNVICLTCTVVAVCYGSFY 548


>sp|Q969N2|PIGT_HUMAN GPI transamidase component PIG-T OS=Homo
sapiens GN=PIGT PE=1 SV=1
Length = 578

Score = 29.3 bits (64), Expect = 6.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1

Query: 313 PTMLFSIPFTSMCMTQRCTCPCFSSFY 393
PT FS+P+ +C+T C+ SFY
Sbjct: 518 PTPDFSMPYNVICLTCTVVAVCYGSFY 544


>sp|P70753|BGAL_ACTPL Beta-galactosidase OS=Actinobacillus
pleuropneumoniae GN=lacZ PE=3 SV=1
Length = 1005

Score = 29.3 bits (64), Expect = 6.4
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 13/87 (14%)
Frame = +3

Query: 9 QNH--EHHNCDQI----PTMPPLLMHTSPPVFCNANLHTCSPTMNCYFALPHSSAHLPYY 170
QNH +HH+ I P PP + H +P C T T H Y
Sbjct: 82 QNHGFDHHHYTNINYPFPFEPPFVPHQNP---CGVYHRTLQLTPK----------HKRYL 128

Query: 171 L-------CIFIFVSTLYVGYPS*SHS 230
L C+F++V+ +VGY SH+
Sbjct: 129 LNFEGVDSCLFVYVNKQFVGYSQISHN 155


>sp|Q684R7|FREM1_MOUSE FRAS1-related extracellular matrix protein 1
OS=Mus musculus GN=Frem1 PE=1 SV=1
Length = 2191

Score = 28.9 bits (63), Expect = 8.4
Identities = 22/73 (30%), Positives = 31/73 (42%)
Frame = +3

Query: 42 PTMPPLLMHTSPPVFCNANLHTCSPTMNCYFALPHSSAHLPYYLCIFIFVSTLYVGYPS* 221
PT P L T + +AN HTCS FA H+ H+ ++ + PS
Sbjct: 719 PTAPGLSSFTQGLILISANQHTCS----SQFASQHAVNHMK-----VAYMPPMQDIGPSP 769

Query: 222 SHSQYTIHPSLIH 260
H Q+T+ S H
Sbjct: 770 RHVQFTVSVSNQH 782


tr_hit_id A7SL61
Definition tr|A7SL61|A7SL61_NEMVE Predicted protein OS=Nematostella vectensis
Align length 81
Score (bit) 36.2
E-value 0.84
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916834|Adiantum capillus-veneris mRNA, clone:
YMU001_000092_C07.
(418 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7SL61|A7SL61_NEMVE Predicted protein OS=Nematostella vectens... 36 0.84
tr|A7RVH1|A7RVH1_NEMVE Predicted protein (Fragment) OS=Nematoste... 34 3.2
tr|B8M755|B8M755_9EURO C6 finger domain protein, putative OS=Tal... 33 5.4
tr|A5UPN8|A5UPN8_ROSS1 Putative uncharacterized protein OS=Rosei... 33 5.4

>tr|A7SL61|A7SL61_NEMVE Predicted protein OS=Nematostella vectensis
GN=v1g122305 PE=4 SV=1
Length = 225

Score = 36.2 bits (82), Expect = 0.84
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Frame = +3

Query: 48 MPPLLMHTSPPVF-CNANLHTCSPTMNCYFAL-----PHSSAHLPYYLCIFIFVSTLYVG 209
M L ++T+PP+ C +LHT P C +L P+++AH Y T +
Sbjct: 96 MHTLPINTTPPLHECTLSLHTTPPLHECTLSLYTPPLPYTNAHTLY---------TPPLP 146

Query: 210 YPS*SHSQYTIHPSLIHYHVL 272
Y + +HS YT HPS H L
Sbjct: 147 YTN-AHSLYTHHPSPTRMHTL 166



Score = 35.4 bits (80), Expect = 1.4
Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 2/104 (1%)
Frame = +3

Query: 15 HEHHNCDQIPT-MPPLLMHTSPPVF-CNANLHTCSPTMNCYFALPHSSAHLPYYLCIFIF 188
H + PT M L +HT+PP+ C ++HT P C +L + LPY
Sbjct: 30 HSPYTHHPSPTRMHTLSIHTTPPLHECTLSIHTTPPLHECTLSL--YTPPLPY------- 80

Query: 189 VSTLYVGYPS*SHSQYTIHPSLIHYHVLDASRIMKLNKHFLPNH 320
+ +HS YT HPS H L + L++ L H
Sbjct: 81 ---------TNAHSLYTHHPSPTRMHTLPINTTPPLHECTLSLH 115


>tr|A7RVH1|A7RVH1_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g94826 PE=4 SV=1
Length = 387

Score = 34.3 bits (77), Expect = 3.2
Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Frame = +3

Query: 39 IPTMPPLLMHTSPPVFCNANLHTCSPTMNCYFALPHSSAHLPYYLCIFIFVST-----LY 203
+ T+P + + +P ++ H + + C + PH+ P Y+ + T Y
Sbjct: 251 VHTLPLIFTYPTPHMYIPYPSHVHTLPLICTYPTPHTYIPYPSYIHTLPLIHTYPTPHTY 310

Query: 204 VGYPS*SHSQYTIH---------PSLIHYHVLDASRIMKLNKHFLPNHAFLHTL 338
+ YPS H+ IH P + H L ++P +++HTL
Sbjct: 311 IPYPSYIHTLPLIHTYPTPHTYIPYPSYVHTLPLIHTYPTPHTYIPYPSYIHTL 364


>tr|B8M755|B8M755_9EURO C6 finger domain protein, putative
OS=Talaromyces stipitatus ATCC 10500 GN=TSTA_035040 PE=4
SV=1
Length = 440

Score = 33.5 bits (75), Expect = 5.4
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1

Query: 295 STSTFSPTMLFSIPFTSMCMTQRCTCPCFSSFYTCFPFISS 417
ST++ S +ML ++P ++ TCPC S Y C +SS
Sbjct: 149 STTSASASMLSNVPSSAALGEDAPTCPCLSYLYLCLSTLSS 189


>tr|A5UPN8|A5UPN8_ROSS1 Putative uncharacterized protein
OS=Roseiflexus sp. (strain RS-1) GN=RoseRS_0153 PE=4
SV=1
Length = 168

Score = 33.5 bits (75), Expect = 5.4
Identities = 26/96 (27%), Positives = 41/96 (42%)
Frame = +3

Query: 66 HTSPPVFCNANLHTCSPTMNCYFALPHSSAHLPYYLCIFIFVSTLYVGYPS*SHSQYTIH 245
H++ P F NA + T +P MN A H A + + P+ SQ +
Sbjct: 41 HSAAPAFVNATIETVAPAMNGNIAQVHPPA-------ATVETNAQTCSSPA---SQNASN 90

Query: 246 PSLIHYHVLDASRIMKLNKHFLPNHAFLHTLHFHVH 353
PS + + A ++ L KH + A + TL H+H
Sbjct: 91 PSQLSRNERIAFVVVHLQKHRVTRPAKVATLRNHIH 126