BP916694
Clone id YMU001_000090_E02
Library
Length 488
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000090_E02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GATGTCTTGTCGCCAATGAACACCTTCCCTTTCTTTGCCTGAAGATGCTGGAGACCATCC
CTCAATGGTGTCATGTGCTTGGAAGCGCAACTGTCCACTATCCACTCTTGAGACGAAGAT
GATGTAAGGAAAGCCTCCTTGTCAGAGTCATCAGAAGGTCTATATGCACAAAGGCCCCTG
GTCAAGCCACAACTACAGTCTCCTTCGCCTTGGTAGATTTCTTTGGACAATTGCGACGTA
CGTGGCCAATCTCGCCACAATCAAAGCATGTCACCTCCTACTTCGAAGCATCTTGCTTCC
GATCATCCTTGGACTGTTGTTGCTTGCCTTTGGTTTGCTGTTTATTCTTCTGATTTTGGT
TCCTTGAACACTGGCCCATCAAGCCAACTGAACCCCCTCTGTTTCCAGAGGTGTTCTTGA
ACTTGTCCTCCTGATCTAACACCGTGGGAGCTAGCTCTTCCCATGTCAAATCAGTCATCC
GCCTCGCG
■■Homology search results ■■ -
sp_hit_id P10978
Definition sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum
Align length 31
Score (bit) 33.9
E-value 0.001
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916694|Adiantum capillus-veneris mRNA, clone:
YMU001_000090_E02.
(488 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from tra... 34 0.001
sp|Q6XKE6|POLG_PVCV2 Genome polyprotein OS=Petunia vein clearing... 35 0.18
sp|Q91DM0|POLG_PVCV1 Genome polyprotein OS=Petunia vein clearing... 35 0.18
sp|Q5TAX3|ZCH11_HUMAN Zinc finger CCHC domain-containing protein... 34 0.40
sp|P63128|POK4_HUMAN HERV-K_6q14.1 provirus ancestral Gag-Pol po... 33 0.53
sp|Q04832|HEXP_LEIMA DNA-binding protein HEXBP OS=Leishmania maj... 33 0.53
sp|P62685|GAK6_HUMAN HERV-K_8p23.1 provirus ancestral Gag polypr... 33 0.53
sp|P62684|GAK5_HUMAN HERV-K_19p13.11 provirus ancestral Gag poly... 33 0.53
sp|P63126|GAK4_HUMAN HERV-K_6q14.1 provirus ancestral Gag polypr... 33 0.53
sp|Q9YNA8|GAK3_HUMAN HERV-K_19q12 provirus ancestral Gag polypro... 33 0.53
sp|Q7LDI9|GAK2_HUMAN HERV-K_7p22.1 provirus ancestral Gag polypr... 33 0.53
sp|P62683|GAK1_HUMAN HERV-K_12q14.1 provirus ancestral Gag polyp... 33 0.53
sp|P63130|GAK12_HUMAN HERV-K_1q22 provirus ancestral Gag polypro... 33 0.53
sp|P63145|GAK11_HUMAN HERV-K_22q11.21 provirus ancestral Gag pol... 33 0.53
sp|P87889|GAK10_HUMAN HERV-K_5q33.3 provirus ancestral Gag polyp... 33 0.53
sp|P14380|YTX1_XENLA Transposon TX1 uncharacterized 82 kDa prote... 33 0.90
sp|Q9HDB9|GAK8_HUMAN HERV-K_3q12.3 provirus ancestral Gag polypr... 33 0.90
sp|P62690|GAK18_HUMAN HERV-K_22q11.23 provirus ancestral Gag pol... 33 0.90
sp|Q8WW36|ZCH13_HUMAN Zinc finger CCHC domain-containing protein... 32 1.2
sp|Q4P384|YTH1_USTMA mRNA 3'-end-processing protein YTH1 OS=Usti... 32 1.2
sp|Q82851|POL_JEMBR Gag-Pol polyprotein OS=Jembrana disease viru... 32 1.2
sp|P05959|POL_HV1RH Gag-Pol polyprotein OS=Human immunodeficienc... 32 1.2
sp|P05890|GAG_HV1RH Gag polyprotein OS=Human immunodeficiency vi... 32 1.2
sp|Q8AII1|POL_SIVTN Gag-Pol polyprotein OS=Simian immunodeficien... 32 1.5
sp|Q8AII2|GAG_SIVTN Gag polyprotein OS=Simian immunodeficiency v... 32 1.5
sp|P05895|POL_SIVVT Gag-Pol polyprotein OS=Simian immunodeficien... 32 2.0
sp|P27980|POL_SIVVG Gag-Pol polyprotein OS=Simian immunodeficien... 32 2.0
sp|P27978|GAG_SIVVG Gag polyprotein OS=Simian immunodeficiency v... 32 2.0
sp|P62634|CNBP_RAT Cellular nucleic acid-binding protein OS=Ratt... 32 2.0
sp|Q5R5R5|CNBP_PONAB Cellular nucleic acid-binding protein OS=Po... 32 2.0

>sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from
transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1
Length = 1328

Score = 33.9 bits (76), Expect(2) = 0.001
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1

Query: 149 DSDKEAFLTSSSSQEWIVDSCASKHMTPLRD 57
+ ++E S EW+VD+ AS H TP+RD
Sbjct: 279 NEEEECMHLSGPESEWVVDTAASHHATPVRD 309



Score = 27.7 bits (60), Expect(2) = 0.001
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2

Query: 268 CFDCGEIGHVRRNCPKKSTKAKET 197
C++C + GH +R+CP ET
Sbjct: 232 CYNCNQPGHFKRDCPNPRKGKGET 255


>sp|Q6XKE6|POLG_PVCV2 Genome polyprotein OS=Petunia vein clearing
virus (isolate Hohn) PE=3 SV=1
Length = 2180

Score = 35.0 bits (79), Expect = 0.18
Identities = 15/23 (65%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
Frame = -2

Query: 271 TCFDCGEIGHVRRNCP--KKSTK 209
+CF CG+IGH RNCP KKS K
Sbjct: 1112 SCFTCGKIGHFSRNCPQNKKSIK 1134


>sp|Q91DM0|POLG_PVCV1 Genome polyprotein OS=Petunia vein clearing
virus (isolate Shepherd) PE=3 SV=1
Length = 2179

Score = 35.0 bits (79), Expect = 0.18
Identities = 15/23 (65%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
Frame = -2

Query: 271 TCFDCGEIGHVRRNCP--KKSTK 209
+CF CG+IGH RNCP KKS K
Sbjct: 1111 SCFTCGKIGHFSRNCPQNKKSIK 1133


>sp|Q5TAX3|ZCH11_HUMAN Zinc finger CCHC domain-containing protein 11
OS=Homo sapiens GN=ZCCHC11 PE=1 SV=3
Length = 1644

Score = 33.9 bits (76), Expect = 0.40
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = -2

Query: 277 EVTCFDCGEIGHVRRNCPK-KSTKAKETVVVA 185
++ CF CG+ GHVRR CP+ K + + + V A
Sbjct: 1356 DLRCFICGDAGHVRRECPEVKLARQRNSSVAA 1387


>sp|P63128|POK4_HUMAN HERV-K_6q14.1 provirus ancestral Gag-Pol
polyprotein OS=Homo sapiens PE=3 SV=3
Length = 1117

Score = 33.5 bits (75), Expect = 0.53
Identities = 9/15 (60%), Positives = 15/15 (100%)
Frame = -2

Query: 268 CFDCGEIGHVRRNCP 224
C++CG+IGH+++NCP
Sbjct: 546 CYNCGQIGHLKKNCP 560


>sp|Q04832|HEXP_LEIMA DNA-binding protein HEXBP OS=Leishmania major
GN=HEXBP PE=4 SV=1
Length = 271

Score = 33.5 bits (75), Expect = 0.53
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2

Query: 274 VTCFDCGEIGHVRRNCPKKS 215
+TCF CGE GH+ R+CP +
Sbjct: 70 MTCFRCGEAGHMSRDCPNSA 89



Score = 32.7 bits (73), Expect = 0.90
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2

Query: 271 TCFDCGEIGHVRRNCP 224
TC+ CGE GH+ R+CP
Sbjct: 254 TCYKCGEAGHISRDCP 269



Score = 32.3 bits (72), Expect = 1.2
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2

Query: 271 TCFDCGEIGHVRRNCPKKS 215
TCF CGE GH+ R CP ++
Sbjct: 44 TCFRCGEEGHMSRECPNEA 62



Score = 31.6 bits (70), Expect = 2.0
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -2

Query: 271 TCFDCGEIGHVRRNCP 224
TC+ CG+ GH+ R+CP
Sbjct: 141 TCYKCGDAGHISRDCP 156



Score = 31.6 bits (70), Expect = 2.0
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -2

Query: 271 TCFDCGEIGHVRRNCP 224
TC+ CG+ GH+ R+CP
Sbjct: 169 TCYKCGDAGHISRDCP 184



Score = 29.3 bits (64), Expect = 9.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2

Query: 271 TCFDCGEIGHVRRNCPKKSTKAKE 200
+C +CG+ GH R CP+ +K E
Sbjct: 17 SCRNCGKEGHYARECPEADSKGDE 40



Score = 29.3 bits (64), Expect = 9.9
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2

Query: 268 CFDCGEIGHVRRNCP 224
C+ CGE GH+ R CP
Sbjct: 198 CYKCGESGHMSRECP 212


>sp|P62685|GAK6_HUMAN HERV-K_8p23.1 provirus ancestral Gag
polyprotein OS=Homo sapiens PE=1 SV=2
Length = 647

Score = 33.5 bits (75), Expect = 0.53
Identities = 9/15 (60%), Positives = 15/15 (100%)
Frame = -2

Query: 268 CFDCGEIGHVRRNCP 224
C++CG+IGH+++NCP
Sbjct: 546 CYNCGQIGHLKKNCP 560


>sp|P62684|GAK5_HUMAN HERV-K_19p13.11 provirus ancestral Gag
polyprotein OS=Homo sapiens PE=1 SV=2
Length = 666

Score = 33.5 bits (75), Expect = 0.53
Identities = 9/15 (60%), Positives = 15/15 (100%)
Frame = -2

Query: 268 CFDCGEIGHVRRNCP 224
C++CG+IGH+++NCP
Sbjct: 546 CYNCGQIGHLKKNCP 560


>sp|P63126|GAK4_HUMAN HERV-K_6q14.1 provirus ancestral Gag
polyprotein OS=Homo sapiens PE=1 SV=2
Length = 666

Score = 33.5 bits (75), Expect = 0.53
Identities = 9/15 (60%), Positives = 15/15 (100%)
Frame = -2

Query: 268 CFDCGEIGHVRRNCP 224
C++CG+IGH+++NCP
Sbjct: 546 CYNCGQIGHLKKNCP 560


>sp|Q9YNA8|GAK3_HUMAN HERV-K_19q12 provirus ancestral Gag
polyprotein OS=Homo sapiens PE=1 SV=3
Length = 666

Score = 33.5 bits (75), Expect = 0.53
Identities = 9/15 (60%), Positives = 15/15 (100%)
Frame = -2

Query: 268 CFDCGEIGHVRRNCP 224
C++CG+IGH+++NCP
Sbjct: 546 CYNCGQIGHLKKNCP 560


tr_hit_id Q7XLX2
Definition tr|Q7XLX2|Q7XLX2_ORYSA OSJNBa0042I15.19 protein OS=Oryza sativa
Align length 30
Score (bit) 36.2
E-value 2.0e-05
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916694|Adiantum capillus-veneris mRNA, clone:
YMU001_000090_E02.
(488 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q7XLX2|Q7XLX2_ORYSA OSJNBa0042I15.19 protein OS=Oryza sativa ... 36 2e-05
tr|Q2QUM8|Q2QUM8_ORYSJ Retrotransposon protein, putative, Ty1-co... 35 1e-04
tr|A5BE52|A5BE52_VITVI Putative uncharacterized protein OS=Vitis... 34 6e-04
tr|A5B4I5|A5B4I5_VITVI Putative uncharacterized protein OS=Vitis... 34 0.002
tr|Q2QVJ2|Q2QVJ2_ORYSJ Retrotransposon protein, putative, Ty1-co... 32 0.004
tr|Q2QP15|Q2QP15_ORYSJ Retrotransposon protein, putative, Ty1-co... 32 0.004
tr|Q7XEC4|Q7XEC4_ORYSJ Retrotransposon protein, putative, Ty1-co... 32 0.006
tr|A5CAX7|A5CAX7_VITVI Putative uncharacterized protein OS=Vitis... 32 0.016
tr|A5BJ32|A5BJ32_VITVI Putative uncharacterized protein OS=Vitis... 32 0.016
tr|A5ADV4|A5ADV4_VITVI Putative uncharacterized protein OS=Vitis... 31 0.016
tr|A7P0C8|A7P0C8_VITVI Chromosome chr6 scaffold_3, whole genome ... 32 0.017
tr|A5BFU1|A5BFU1_VITVI Putative uncharacterized protein OS=Vitis... 31 0.020
tr|A7Q4Q2|A7Q4Q2_VITVI Chromosome chr10 scaffold_50, whole genom... 31 0.022
tr|A5BJQ3|A5BJQ3_VITVI Putative uncharacterized protein OS=Vitis... 31 0.026
tr|A5AS37|A5AS37_VITVI Putative uncharacterized protein OS=Vitis... 31 0.026
tr|A5AVU6|A5AVU6_VITVI Putative uncharacterized protein OS=Vitis... 31 0.026
tr|A5C9A6|A5C9A6_VITVI Putative uncharacterized protein OS=Vitis... 31 0.026
tr|A5BA89|A5BA89_VITVI Putative uncharacterized protein OS=Vitis... 31 0.026
tr|A5C844|A5C844_VITVI Putative uncharacterized protein OS=Vitis... 31 0.026
tr|A5BIC7|A5BIC7_VITVI Putative uncharacterized protein OS=Vitis... 31 0.026
tr|A5CBM1|A5CBM1_VITVI Putative uncharacterized protein OS=Vitis... 31 0.026
tr|A5BGX3|A5BGX3_VITVI Putative uncharacterized protein OS=Vitis... 31 0.026
tr|A5C6L3|A5C6L3_VITVI Putative uncharacterized protein OS=Vitis... 31 0.026
tr|A5ATI4|A5ATI4_VITVI Putative uncharacterized protein OS=Vitis... 31 0.026
tr|A5BPB3|A5BPB3_VITVI Putative uncharacterized protein OS=Vitis... 31 0.026
tr|A5BPE6|A5BPE6_VITVI Putative uncharacterized protein OS=Vitis... 34 0.027
tr|A7QG92|A7QG92_VITVI Chromosome undetermined scaffold_91, whol... 31 0.027
tr|A7NW85|A7NW85_VITVI Chromosome chr5 scaffold_2, whole genome ... 31 0.027
tr|A7QAU0|A7QAU0_VITVI Chromosome chr5 scaffold_72, whole genome... 31 0.028
tr|A7R7G1|A7R7G1_VITVI Chromosome undetermined scaffold_1754, wh... 31 0.028

>tr|Q7XLX2|Q7XLX2_ORYSA OSJNBa0042I15.19 protein OS=Oryza sativa
GN=OSJNBa0042I15.19 PE=4 SV=3
Length = 478

Score = 36.2 bits (82), Expect(2) = 2e-05
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -2

Query: 274 VTCFDCGEIGHVRRNCPKKSTKAKETVVVA 185
V CF C E GH+RR CP KAK V +
Sbjct: 276 VKCFRCDEWGHIRRECPTLKGKAKANVATS 305



Score = 35.4 bits (80), Expect(2) = 2e-05
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 8/59 (13%)
Frame = -1

Query: 155 SDDSDKEA--FLTSSSSQE-----WIVDSCASKHMTPLRDGLQHLQAKK-GKVFIGDKT 3
S+DSD + LT SS+Q WI+DS +S H+TP ++ ++ + G V++GD T
Sbjct: 306 SNDSDSDGCDLLTMSSAQSKDAEAWILDSASSFHVTPRKEWFSSYKSGEFGFVYLGDDT 364


>tr|Q2QUM8|Q2QUM8_ORYSJ Retrotransposon protein, putative, Ty1-copia
subclass OS=Oryza sativa subsp. japonica
GN=LOC_Os12g15720 PE=4 SV=2
Length = 407

Score = 35.4 bits (80), Expect(2) = 1e-04
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 8/59 (13%)
Frame = -1

Query: 155 SDDSDKEA--FLTSSSSQE-----WIVDSCASKHMTPLRDGLQHLQAKK-GKVFIGDKT 3
S+DSD + LT SS+Q WI+DS +S H+TP ++ ++ + G V++GD T
Sbjct: 235 SNDSDSDGCDLLTMSSAQSKDAEAWILDSASSFHVTPRKEWFSSYKSGEFGFVYLGDDT 293



Score = 33.9 bits (76), Expect(2) = 1e-04
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -2

Query: 274 VTCFDCGEIGHVRRNCPKKSTKAKETVVVA 185
V CF C E GH+ R CP KAK V +
Sbjct: 205 VQCFRCDEWGHISRECPTLKGKAKANTVTS 234


>tr|A5BE52|A5BE52_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_039063 PE=4 SV=1
Length = 1643

Score = 33.9 bits (76), Expect(2) = 6e-04
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -1

Query: 125 TSSSSQEWIVDSCASKHMTPLRDGLQHLQAKKGKVFIGD 9
TSSS++ WI+D+ AS HM RD + G V +GD
Sbjct: 613 TSSSAESWILDTGASYHMAYSRDLFTTFKEWNGSVKLGD 651



Score = 32.7 bits (73), Expect(2) = 6e-04
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2

Query: 277 EVTCFDCGEIGHVRRNCPKK 218
E+ CF C E GH R+NCP++
Sbjct: 553 EMRCFHCKEKGHFRKNCPQR 572


>tr|A5B4I5|A5B4I5_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_038665 PE=4 SV=1
Length = 1562

Score = 34.3 bits (77), Expect(2) = 0.002
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Frame = -1

Query: 212 QGEGDCSCGLTRGLCAYRPSDDSDKE---------AFLTSSSSQEWIVDSCASKHMTPLR 60
+G G S G + + A + S+ D TSSS++ WI+D+ AS HM R
Sbjct: 378 KGIGQGSNGNAQVVVAQKDSEKQDSSDEGEGGDVLTVSTSSSAESWILDTGASYHMAYSR 437

Query: 59 DGLQHLQAKKGKVFIGD 9
D + G V +GD
Sbjct: 438 DLFTTFKEWNGSVKLGD 454



Score = 30.8 bits (68), Expect(2) = 0.002
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2

Query: 268 CFDCGEIGHVRRNCPKK 218
CF C E GH R+NCP++
Sbjct: 360 CFHCKEKGHFRKNCPQR 376


>tr|Q2QVJ2|Q2QVJ2_ORYSJ Retrotransposon protein, putative, Ty1-copia
subclass OS=Oryza sativa subsp. japonica
GN=LOC_Os12g12620 PE=4 SV=1
Length = 424

Score = 32.3 bits (72), Expect(2) = 0.004
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2

Query: 268 CFDCGEIGHVRRNCP 224
C+ C E GH+RRNCP
Sbjct: 223 CYKCHEFGHIRRNCP 237



Score = 31.6 bits (70), Expect(2) = 0.004
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = -1

Query: 173 LCAYRPSDDSDKEAFLTSS---SSQEWIVDSCASKHMTPLRDGLQHLQAKK-GKVFIGDK 6
L A DS LT S S + W++DS +S H+T R+ ++ G V++GD
Sbjct: 249 LAARGDDSDSSSHEILTVSNEKSGEAWMLDSASSYHVTSKREWFSSYKSGDFGVVYLGDD 308

Query: 5 T 3
T
Sbjct: 309 T 309


>tr|Q2QP15|Q2QP15_ORYSJ Retrotransposon protein, putative, Ty1-copia
subclass OS=Oryza sativa subsp. japonica
GN=LOC_Os12g36020 PE=4 SV=1
Length = 425

Score = 32.3 bits (72), Expect(2) = 0.004
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2

Query: 268 CFDCGEIGHVRRNCP 224
C+ C E GH+RRNCP
Sbjct: 224 CYKCHEFGHIRRNCP 238



Score = 31.6 bits (70), Expect(2) = 0.004
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Frame = -1

Query: 152 DDSDKEAFLTSSSSQE-----WIVDSCASKHMTPLRDGLQHLQAKK-GKVFIGDKT 3
DDSD + T + S E W++DS +S H+T R+ ++ G V++GD T
Sbjct: 255 DDSDSSSHETLTVSNEKSGEAWMLDSASSYHVTSKREWFSSYKSGDFGVVYLGDDT 310


>tr|Q7XEC4|Q7XEC4_ORYSJ Retrotransposon protein, putative, Ty1-copia
subclass OS=Oryza sativa subsp. japonica
GN=LOC_Os10g29210 PE=4 SV=2
Length = 415

Score = 32.3 bits (72), Expect(2) = 0.006
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2

Query: 268 CFDCGEIGHVRRNCP 224
C+ C E GH+RRNCP
Sbjct: 224 CYKCHEFGHIRRNCP 238



Score = 30.8 bits (68), Expect(2) = 0.006
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = -1

Query: 173 LCAYRPSDDSDKEAFLTSS---SSQEWIVDSCASKHMTPLRDGLQHLQAKK-GKVFIGDK 6
L A DS LT S S + W++DS +S H+T R+ ++ G V++GD
Sbjct: 250 LAARGDDSDSGSHEILTVSDEMSGEAWMLDSASSYHVTSKREWFSSYKSGDFGVVYLGDG 309

Query: 5 T 3
T
Sbjct: 310 T 310


>tr|A5CAX7|A5CAX7_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_035336 PE=4 SV=1
Length = 1244

Score = 32.0 bits (71), Expect(2) = 0.016
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = -1

Query: 119 SSSQEWIVDSCASKHMTPLRDGLQHLQAKK-GKVFIGD 9
S +W++DS AS H TP R+ +Q+ A GKV++ D
Sbjct: 281 SPLDDWVLDSGASFHTTPXREIIQNYVAGDFGKVYLAD 318



Score = 29.6 bits (65), Expect(2) = 0.016
Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = -2

Query: 277 EVTCFDCGEIGHVRRNC--PKKSTK 209
+V C++CG+ GH +R C PKK +
Sbjct: 236 QVQCWNCGKTGHFKRQCKSPKKKNE 260


>tr|A5BJ32|A5BJ32_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_041204 PE=4 SV=1
Length = 1067

Score = 32.0 bits (71), Expect(2) = 0.016
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -1

Query: 143 DKEAFLTSSSSQEWIVDSCASKHMTPLRDGLQHLQAKK-GKVFIGD 9
D + S +W++DS AS H TP R+ +Q+ A GKV++ D
Sbjct: 273 DALLLVVDSPLDDWVLDSGASFHTTPHREIIQNYVAGDFGKVYLAD 318



Score = 29.6 bits (65), Expect(2) = 0.016
Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = -2

Query: 277 EVTCFDCGEIGHVRRNC--PKKSTK 209
+V C++CG+ GH +R C PKK +
Sbjct: 236 QVQCWNCGKTGHFKRQCKNPKKKNE 260


>tr|A5ADV4|A5ADV4_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_028182 PE=4 SV=1
Length = 815

Score = 31.2 bits (69), Expect(2) = 0.016
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = -1

Query: 119 SSSQEWIVDSCASKHMTPLRDGLQHLQAKK-GKVFIGD 9
S +W++DS AS H TP R+ +Q+ A GKV++ D
Sbjct: 281 SPLDDWVLDSGASFHTTPHREIIQNYVAGDFGKVYLAD 318



Score = 30.4 bits (67), Expect(2) = 0.016
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -2

Query: 277 EVTCFDCGEIGHVRRNC--PKKSTKAKETVVV 188
+V C++CG+ GH +R C PKK + VV
Sbjct: 236 QVQCWNCGKTGHFKRQCKSPKKKNEDDSANVV 267