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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916627
Clone id YMU001_000089_G05
Library
Length 501
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000089_G05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GCCATCCGGTTGAGGCATTCCAGTCCTCACGTCGATGCTCCTACACCAACTGTCCCTTTC
GCTGGCCCCAAATACCAATTTGATCCAGCCCTTGGAGCCTCTTTCTATGCTGCAAACTCT
GTGCCACCATTGAAGTCTGTTGCAGCTAAAGATGATGCTGCCACCATCGAAGTGTTTCTC
GCTTTCCTAAACACTTCTTTCAAGGCTTACATATTTGGGCATACAGCAAGTGCAAGTGTC
CCTACAAAGCCTTGCTATGATGAGTCTTCTCTGAACGCTACTCCAACTGATCTCCTTCAA
GCTACCTTGGATGCTTCTTCCAATCCAATATCCAAATTGGATTTATTTGATGCTTATATT
GTTGTTCCTCTTTCACCTGAGCATCATTTCCACTCTTTACCGGTTGAGAGCCTCTTCTAC
ACGGACTCTCAAGCTGCTGACACTCCCCTGAGTTGCTTGCCTTTGACACTTACCAATGCT
CAAGCATTACGAGCACCAGGC
■■Homology search results ■■ -
sp_hit_id P53753
Definition sp|P53753|ENG1_YEAST Endo-1,3(4)-beta-glucanase 1 OS=Saccharomyces cerevisiae
Align length 100
Score (bit) 30.0
E-value 6.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916627|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_G05.
         (501 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P53753|ENG1_YEAST Endo-1,3(4)-beta-glucanase 1 OS=Saccharomyc...    30   6.4  
sp|Q9QWV9|CCNT1_MOUSE Cyclin-T1 OS=Mus musculus GN=Ccnt1 PE=1 SV=2     30   6.4  

>sp|P53753|ENG1_YEAST Endo-1,3(4)-beta-glucanase 1 OS=Saccharomyces
           cerevisiae GN=DSE4 PE=1 SV=1
          Length = 1117

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 17/100 (17%)
 Frame = +1

Query: 85  PALGASFYAANSVPPLKSVAAKDDAA----------TIEVFLAFLNTSFKAYIFGHTASA 234
           PA    FY +NS   L    A   A+          T+   ++  +T+   Y    T + 
Sbjct: 249 PASSTLFYPSNSTQDLVQTLASTTASPAYPSNRTQITLSPSVSLYSTTSPIYPSNITENG 308

Query: 235 SVPT-------KPCYDESSLNATPTDLLQATLDASSNPIS 333
           S P+        P Y  SS        L +T+D+SS+P+S
Sbjct: 309 SSPSPSLSSTVSPVYPSSSTGNILLSSLFSTVDSSSSPVS 348


>sp|Q9QWV9|CCNT1_MOUSE Cyclin-T1 OS=Mus musculus GN=Ccnt1 PE=1 SV=2
          Length = 724

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +1

Query: 223 TASAS-VPTKPCYDESSLNATPTDLLQATLDASSNPISKLD 342
           TAS S VP+ P  +ESS + T  D+LQ     SS P  KL+
Sbjct: 304 TASTSAVPSLPSSEESSSSLTSVDMLQGERWLSSQPPFKLE 344
tr_hit_id A6GSQ9
Definition tr|A6GSQ9|A6GSQ9_9BURK Acyltransferase OS=Limnobacter sp. MED105
Align length 104
Score (bit) 37.4
E-value 0.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916627|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_G05.
         (501 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A6GSQ9|A6GSQ9_9BURK Acyltransferase OS=Limnobacter sp. MED105...    37   0.40 
tr|Q63KQ5|Q63KQ5_BURPS Putative ATP-binding ABC transporter prot...    35   2.6  
tr|Q4UV43|Q4UV43_XANC8 Putative uncharacterized protein OS=Xanth...    35   2.6  
tr|B0RTR4|B0RTR4_XANCB Putative uncharacterized protein OS=Xanth...    35   2.6  
tr|A3TYY1|A3TYY1_9RHOB Outer membrane autotransporter domain pro...    35   2.6  
tr|A1ZXK9|A1ZXK9_9SPHI Putative uncharacterized protein OS=Micro...    35   2.6  
tr|Q9TXR9|Q9TXR9_CAEEL Putative uncharacterized protein OS=Caeno...    34   3.4  
tr|Q8MXJ1|Q8MXJ1_CAEEL Putative uncharacterized protein OS=Caeno...    34   3.4  
tr|O17339|O17339_CAEEL Putative uncharacterized protein OS=Caeno...    34   3.4  
tr|O17338|O17338_CAEEL Putative uncharacterized protein OS=Caeno...    34   3.4  
tr|Q0V7J2|Q0V7J2_PHANO Putative uncharacterized protein OS=Phaeo...    34   3.4  
tr|A1UVL1|A1UVL1_BURMS Putative glutathione ABC transporter, ATP...    34   4.5  
tr|Q7PJV5|Q7PJV5_ANOGA AGAP010143-PA OS=Anopheles gambiae GN=AGA...    34   4.5  
tr|Q5CVZ4|Q5CVZ4_CRYPV Putative uncharacterized protein OS=Crypt...    34   4.5  
tr|A1CAQ6|A1CAQ6_ASPCL 80 kD MCM3-associated protein OS=Aspergil...    34   4.5  
tr|A3UMN5|A3UMN5_VIBSP Putative uncharacterized protein OS=Vibri...    33   5.8  
tr|Q2RLH7|Q2RLH7_MOOTA Pyruvate ferredoxin oxidoreductase, alpha...    33   7.6  
tr|A3NAB7|A3NAB7_BURP6 Putative uncharacterized protein OS=Burkh...    33   7.6  
tr|A1T9T0|A1T9T0_MYCVP Beta-ketoacyl synthase OS=Mycobacterium v...    33   7.6  
tr|B1S732|B1S732_9BIFI Putative uncharacterized protein OS=Bifid...    33   7.6  
tr|Q5CKL4|Q5CKL4_CRYHO Putative uncharacterized protein OS=Crypt...    33   7.6  
tr|B6PYN4|B6PYN4_BRAFL Putative uncharacterized protein OS=Branc...    33   7.6  
tr|B4NNC0|B4NNC0_DROWI GK23288 OS=Drosophila willistoni GN=GK232...    33   7.6  
tr|B5JHF9|B5JHF9_9BACT Filamentous haemagglutinin family N-termi...    33   9.9  
tr|Q4Q465|Q4Q465_LEIMA Putative uncharacterized protein OS=Leish...    33   9.9  

>tr|A6GSQ9|A6GSQ9_9BURK Acyltransferase OS=Limnobacter sp. MED105
           GN=LMED105_16018 PE=4 SV=1
          Length = 508

 Score = 37.4 bits (85), Expect = 0.40
 Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 3/104 (2%)
 Frame = +1

Query: 40  PTPTVPFAGPKYQFDPALGASFYAANSVPPLKSVAAKDDAATI---EVFLAFLNTSFKAY 210
           P    PF+GPK   +  +G +   A    PL+ V A  +AA +   ++FLA  ++S + Y
Sbjct: 226 PALATPFSGPKSIVNKRVGGARRLATQTYPLERVRAVAEAAKVSVNDIFLAICSSSIRRY 285

Query: 211 IFGHTASASVPTKPCYDESSLNATPTDLLQATLDASSNPISKLD 342
           +                    +A P++ L A L  S  P   LD
Sbjct: 286 LL-----------------ERDALPSESLTAGLPVSVRPADDLD 312


>tr|Q63KQ5|Q63KQ5_BURPS Putative ATP-binding ABC transporter protein
           OS=Burkholderia pseudomallei GN=BPSS1307 PE=3 SV=1
          Length = 679

 Score = 34.7 bits (78), Expect = 2.6
 Identities = 33/124 (26%), Positives = 50/124 (40%), Gaps = 11/124 (8%)
 Frame = +1

Query: 1   AIRLRHSSPHVDAPTPTVPFAG-----------PKYQFDPALGASFYAANSVPPLKSVAA 147
           AI    S P+  A    VP  G           P  +FDPA G +   A       + AA
Sbjct: 258 AIFAAPSHPYTKALLAAVPRLGSMRGTDAPAKFPLLRFDPAAGDALVVAGG----DATAA 313

Query: 148 KDDAATIEVFLAFLNTSFKAYIFGHTASASVPTKPCYDESSLNATPTDLLQATLDASSNP 327
             DAA   V   F+++   A     TAS +        +S+ +A PT   +  +DA + P
Sbjct: 314 SGDAARESVL--FVDSDAAAASAASTASTASTVSTVSADSAASAAPTACARPAIDAGAPP 371

Query: 328 ISKL 339
           + ++
Sbjct: 372 LLRV 375


>tr|Q4UV43|Q4UV43_XANC8 Putative uncharacterized protein
           OS=Xanthomonas campestris pv. campestris (strain 8004)
           GN=XC_2019 PE=4 SV=1
          Length = 460

 Score = 34.7 bits (78), Expect = 2.6
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = +1

Query: 256 YDESSLNATPTDLLQATLDASSNPISKLDLFDAYIVVPLSPEHHFHS-LPVESLFYTDSQ 432
           Y +  + ATP ++        +N  S LD  + ++ +PL   H  H+ LPV+     DS 
Sbjct: 183 YGQVKVYATPQEIATLEQAGYANTTSVLDARNPFVAIPLGDSHRIHNFLPVDGSGKPDSS 242

Query: 433 AADTP 447
             + P
Sbjct: 243 VLENP 247


>tr|B0RTR4|B0RTR4_XANCB Putative uncharacterized protein
           OS=Xanthomonas campestris pv. campestris (strain B100)
           GN=xcc-b100_2468 PE=4 SV=1
          Length = 460

 Score = 34.7 bits (78), Expect = 2.6
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = +1

Query: 256 YDESSLNATPTDLLQATLDASSNPISKLDLFDAYIVVPLSPEHHFHS-LPVESLFYTDSQ 432
           Y +  + ATP ++        +N  S LD  + ++ +PL   H  H+ LPV+     DS 
Sbjct: 183 YGQVKVYATPQEIATLEQAGYANTTSVLDARNPFVAIPLGDSHRIHNFLPVDGSGKPDSS 242

Query: 433 AADTP 447
             + P
Sbjct: 243 VLENP 247


>tr|A3TYY1|A3TYY1_9RHOB Outer membrane autotransporter domain
           protein OS=Oceanicola batsensis HTCC2597 GN=OB2597_15495
           PE=4 SV=1
          Length = 335

 Score = 34.7 bits (78), Expect = 2.6
 Identities = 38/139 (27%), Positives = 54/139 (38%), Gaps = 4/139 (2%)
 Frame = +1

Query: 7   RLRHSSPHVDAPTPTVPFAGPKYQFDPALGASFYAANSVPPLKSVAAKDDAATIEVFLAF 186
           R+    P  D   P  P AG     D   GA+    N    L    A   A+ + +++  
Sbjct: 171 RIAGLGPFGDFIIPLTPGAG-----DGTFGATRVEYNEY--LFEQVAGLRASGLNIYVPN 223

Query: 187 LNTSFKAYIFGHTASASVPTKPCYDESSLNATPTDLLQATLDASSNPISKLDLFDAYI-- 360
           L+ +        TA     T PC      +  PT+   A  D S +PI  LDL +AY   
Sbjct: 224 LDAASARIAADPTAYGITETGPCASTGIGSFDPTNCTFAGFDGSGDPIFDLDLANAYSLA 283

Query: 361 --VVPLSPEHHFHSLPVES 411
             V P +P H   +  VE+
Sbjct: 284 DPVHPTTPVHREWANEVEA 302


>tr|A1ZXK9|A1ZXK9_9SPHI Putative uncharacterized protein
            OS=Microscilla marina ATCC 23134 GN=M23134_05859 PE=4
            SV=1
          Length = 2681

 Score = 34.7 bits (78), Expect = 2.6
 Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 14/130 (10%)
 Frame = +1

Query: 154  DAATIEVFLAFL-NTSFKAYIFGHTASASVPTKPCYDESSLNA-------------TPTD 291
            D  T+ +  A L N  F A +  +  + S      +D S +N              TPT 
Sbjct: 726  DPLTVTIDAAGLGNDKFSASVTDNKLTISYNFDDSFDHSGINTMVIKGLKINLKNNTPTQ 785

Query: 292  LLQATLDASSNPISKLDLFDAYIVVPLSPEHHFHSLPVESLFYTDSQAADTPLSCLPLTL 471
            L   T D +S   S L++ D+Y+   +     F +   E   Y +S  + TP++ L  T 
Sbjct: 786  L-SFTTDLTS---STLNIGDSYVFAQIGSWVTFDTNEAEVKIYKESSVSSTPINTLCAT- 840

Query: 472  TNAQALRAPG 501
            TN   L+A G
Sbjct: 841  TNTYTLKATG 850


>tr|Q9TXR9|Q9TXR9_CAEEL Putative uncharacterized protein
           OS=Caenorhabditis elegans GN=T23E7.2 PE=2 SV=1
          Length = 885

 Score = 34.3 bits (77), Expect = 3.4
 Identities = 35/136 (25%), Positives = 50/136 (36%), Gaps = 6/136 (4%)
 Frame = +1

Query: 22  SPHVDAPTPTVPFAGPKYQFDPALGASFYAANSVPPLKSVAAKDDAATIEVFLAFLNTSF 201
           +P   AP+   P        +  L     A +SVPP    A   +A       A  +   
Sbjct: 324 TPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPP 383

Query: 202 KAYIFGHTASASVPTKPCYDESSLNATP--TDLLQATLDASSNPIS----KLDLFDAYIV 363
                GH A+ S+P  P   + S  ATP  T    AT  A++ P +    K D    +  
Sbjct: 384 TPKSNGHIANGSIPGTPSVAQESAKATPAATPAATATPAATATPAATGTPKADTAFNFEE 443

Query: 364 VPLSPEHHFHSLPVES 411
            P +P     + P ES
Sbjct: 444 TPATPRSSVPATPTES 459


>tr|Q8MXJ1|Q8MXJ1_CAEEL Putative uncharacterized protein
           OS=Caenorhabditis elegans GN=T23E7.2 PE=2 SV=1
          Length = 908

 Score = 34.3 bits (77), Expect = 3.4
 Identities = 35/136 (25%), Positives = 50/136 (36%), Gaps = 6/136 (4%)
 Frame = +1

Query: 22  SPHVDAPTPTVPFAGPKYQFDPALGASFYAANSVPPLKSVAAKDDAATIEVFLAFLNTSF 201
           +P   AP+   P        +  L     A +SVPP    A   +A       A  +   
Sbjct: 324 TPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPP 383

Query: 202 KAYIFGHTASASVPTKPCYDESSLNATP--TDLLQATLDASSNPIS----KLDLFDAYIV 363
                GH A+ S+P  P   + S  ATP  T    AT  A++ P +    K D    +  
Sbjct: 384 TPKSNGHIANGSIPGTPSVAQESAKATPAATPAATATPAATATPAATGTPKADTAFNFEE 443

Query: 364 VPLSPEHHFHSLPVES 411
            P +P     + P ES
Sbjct: 444 TPATPRSSVPATPTES 459


>tr|O17339|O17339_CAEEL Putative uncharacterized protein
           OS=Caenorhabditis elegans GN=T23E7.2 PE=2 SV=1
          Length = 930

 Score = 34.3 bits (77), Expect = 3.4
 Identities = 35/136 (25%), Positives = 50/136 (36%), Gaps = 6/136 (4%)
 Frame = +1

Query: 22  SPHVDAPTPTVPFAGPKYQFDPALGASFYAANSVPPLKSVAAKDDAATIEVFLAFLNTSF 201
           +P   AP+   P        +  L     A +SVPP    A   +A       A  +   
Sbjct: 324 TPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPP 383

Query: 202 KAYIFGHTASASVPTKPCYDESSLNATP--TDLLQATLDASSNPIS----KLDLFDAYIV 363
                GH A+ S+P  P   + S  ATP  T    AT  A++ P +    K D    +  
Sbjct: 384 TPKSNGHIANGSIPGTPSVAQESAKATPAATPAATATPAATATPAATGTPKADTAFNFEE 443

Query: 364 VPLSPEHHFHSLPVES 411
            P +P     + P ES
Sbjct: 444 TPATPRSSVPATPTES 459


>tr|O17338|O17338_CAEEL Putative uncharacterized protein
           OS=Caenorhabditis elegans GN=T23E7.2 PE=2 SV=1
          Length = 880

 Score = 34.3 bits (77), Expect = 3.4
 Identities = 35/136 (25%), Positives = 50/136 (36%), Gaps = 6/136 (4%)
 Frame = +1

Query: 22  SPHVDAPTPTVPFAGPKYQFDPALGASFYAANSVPPLKSVAAKDDAATIEVFLAFLNTSF 201
           +P   AP+   P        +  L     A +SVPP    A   +A       A  +   
Sbjct: 274 TPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPP 333

Query: 202 KAYIFGHTASASVPTKPCYDESSLNATP--TDLLQATLDASSNPIS----KLDLFDAYIV 363
                GH A+ S+P  P   + S  ATP  T    AT  A++ P +    K D    +  
Sbjct: 334 TPKSNGHIANGSIPGTPSVAQESAKATPAATPAATATPAATATPAATGTPKADTAFNFEE 393

Query: 364 VPLSPEHHFHSLPVES 411
            P +P     + P ES
Sbjct: 394 TPATPRSSVPATPTES 409