BP916559 |
Clone id |
YMU001_000089_A07 |
Library |
YMU01 |
Length |
565 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000089_A07. |
Accession |
BP916559 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ATTCGCGGCCGCAGGAATGGCTGTCTTCTGTGTCGAATGCAATTGCTTGTGTTTCGATAG AATCAATTTGGCCTTCAAGATCAGCCGATGAATCACCATCTAAGCCAGCATTAAGATCGT CATCCTCAACAGTGCCTATAGAAGTTCTCCGAAGGTCATTCAGAACACCTTCCTCCTCAA ATGTACCTCCATCAGCTGCGAACAACCCTTGTACAACACCATCAGAAGGGCTTGACAAAG TCAGGACTCTATTTTCAATAACTGCAGTAGCCAGCTTAAACATTGGTGACCATTCACCTG CCACCGCTGTTTTGGCAGTTTTGCTACCCTCAGAGCCATCCTGAACCACGTCATTTTGAG AACTGAGCATGTCGGCACTTTCATGTGTACCATTGGGAGGTTGAGTATCACCGGCATTTA GCTCACTTAAGGCCTCATCTGTGCTGTTCAAAGACACAGGTTCACTGACATCCTGCTGCT TCCGTCCCAAGAGTTGAATGTCTGTACTTTCCATAGGTACCTCCATTGAAGCCCTTCGAA GTTCTCGTCCATTCAAGCTCTGTGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A0R018 |
Definition |
sp|A0R018|MURD_MYCS2 UDP-N-acetylmuramoylalanine--D-glutamate ligase OS=Mycobacterium smegmatis |
Align length |
128 |
Score (bit) |
32.3 |
E-value |
1.5 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q16QC5 |
Definition |
tr|Q16QC5|Q16QC5_AEDAE Zinc finger protein (Fragment) OS=Aedes aegypti |
Align length |
33 |
Score (bit) |
40.4 |
E-value |
0.062 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916559|Adiantum capillus-veneris mRNA, clone: YMU001_000089_A07. (547 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q16QC5|Q16QC5_AEDAE Zinc finger protein (Fragment) OS=Aedes a... 40 0.062 tr|Q09BM9|Q09BM9_STIAU Thrombospondin type 3 repeat family OS=St... 40 0.080 tr|A6LQI1|A6LQI1_CLOB8 Peptidase M23B OS=Clostridium beijerincki... 40 0.10 tr|Q4WI22|Q4WI22_ASPFU Polarized growth protein (Boi2), putative... 37 0.68 tr|B0XUE3|B0XUE3_ASPFC Polarized growth protein Boi2, putative O... 37 0.68 tr|A8T2Q4|A8T2Q4_9VIBR Methyl-accepting chemotaxis protein OS=Vi... 37 0.89 tr|A0ZYR5|A0ZYR5_9CAUD Putative uncharacterized protein OS=Archa... 36 1.2 tr|Q8T0B3|Q8T0B3_DROME LD13887p OS=Drosophila melanogaster GN=CG... 36 1.2 tr|Q0E8G5|Q0E8G5_DROME CG32043, isoform A OS=Drosophila melanoga... 36 1.2 tr|B3NCH2|B3NCH2_DROER GG15381 OS=Drosophila erecta GN=GG15381 P... 36 1.5 tr|B4PEV8|B4PEV8_DROYA GE20844 OS=Drosophila yakuba GN=GE20844 P... 35 2.0 tr|A7EBH1|A7EBH1_SCLS1 Predicted protein OS=Sclerotinia scleroti... 35 2.0 tr|B1W028|B1W028_STRGG Putative lipoprotein OS=Streptomyces gris... 35 2.6 tr|A0M5C2|A0M5C2_GRAFK Putative uncharacterized protein OS=Grame... 35 2.6 tr|B0Z0K8|B0Z0K8_9MYCO RNA polymerase sigma factor (Fragment) OS... 35 2.6 tr|B6L7I8|B6L7I8_BRAFL Putative uncharacterized protein OS=Branc... 35 2.6 tr|A4H8Z5|A4H8Z5_LEIBR Putative uncharacterized protein OS=Leish... 35 2.6 tr|A1CKG5|A1CKG5_ASPCL Putative uncharacterized protein OS=Asper... 35 2.6 tr|A8GYK9|A8GYK9_SHEPA Putative uncharacterized protein OS=Shewa... 35 3.4 tr|Q9SB74|Q9SB74_ARATH Putative uncharacterized protein F28M20.2... 35 3.4 tr|Q2PHR9|Q2PHR9_9META Dentin matrix protein 1 (Fragment) OS=Tla... 35 3.4 tr|B4MN32|B4MN32_DROWI GK17629 OS=Drosophila willistoni GN=GK176... 35 3.4 tr|B4HL49|B4HL49_DROSE GM25152 OS=Drosophila sechellia GN=GM2515... 35 3.4 tr|B3MA92|B3MA92_DROAN GF25137 OS=Drosophila ananassae GN=GF2513... 35 3.4 tr|A7SJ42|A7SJ42_NEMVE Predicted protein OS=Nematostella vectens... 35 3.4 tr|A6SN46|A6SN46_BOTFB Putative uncharacterized protein OS=Botry... 35 3.4 tr|Q30WW1|Q30WW1_DESDG L-lysine 2,3-aminomutase OS=Desulfovibrio... 34 4.4 tr|Q0HFB9|Q0HFB9_SHESM Pseudouridine synthase OS=Shewanella sp. ... 34 4.4 tr|B5ZN80|B5ZN80_RHILW von Willebrand factor type A OS=Rhizobium... 34 4.4 tr|A4A3K5|A4A3K5_9GAMM Dihydrolipoamide succinyltransferase, com... 34 4.4
>tr|Q16QC5|Q16QC5_AEDAE Zinc finger protein (Fragment) OS=Aedes aegypti GN=AAEL011328 PE=4 SV=1 Length = 521
Score = 40.4 bits (93), Expect = 0.062 Identities = 19/33 (57%), Positives = 21/33 (63%) Frame = +2
Query: 275 FTCHRCFGSFATLRAILNHVILRTEHVGTFMCT 373 FTC C G FAT R +L H+ RTEH G F CT Sbjct: 61 FTCTACSGVFATNRGLLRHI--RTEHGGKFACT 91
>tr|Q09BM9|Q09BM9_STIAU Thrombospondin type 3 repeat family OS=Stigmatella aurantiaca DW4/3-1 GN=STIAU_6115 PE=3 SV=1 Length = 5149
Score = 40.0 bits (92), Expect = 0.080 Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 2/115 (1%) Frame = -1
Query: 343 SQNDVVQDGSEGSKTAKTAVAGEWSPMFKLATAVIENRVLTLSSPSDGVVQGLFAADGGT 164 + ND + DGSE + A E SP+ V + L SDG+ L +G Sbjct: 4164 TDNDGLLDGSEDANHNGVVDADETSPL------VFDT---DLDGLSDGLELALTEPEGND 4214
Query: 163 FEEEGVLNDLR-RTSIGTVEDDDLNAGL-DGDSSADLEGQIDSIETQAIAFDTED 5 + + D+ T ++DD + GL DG A+ +G++D+ ET + FDT++ Sbjct: 4215 TDLSKFVADVDPSTKTAPLDDDTDDDGLKDGSEDANHDGKVDANETNPLVFDTDE 4269
>tr|A6LQI1|A6LQI1_CLOB8 Peptidase M23B OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=Cbei_0423 PE=4 SV=1 Length = 250
Score = 39.7 bits (91), Expect = 0.10 Identities = 30/129 (23%), Positives = 56/129 (43%) Frame = -1
Query: 463 KQQDVSEPVSLNSTDEALSELNAGDTQPPNGTHESADMLSSQNDVVQDGSEGSKTAKTAV 284 K +DV++ +++NS +E S N + + ++QN+ +D ++ +KT K A Sbjct: 53 KTEDVNKDLTMNSGNEGNSN---------NSVQNAERVENAQNNSNKDNADKTKTEKAA- 102
Query: 283 AGEWSPMFKLATAVIENRVLTLSSPSDGVVQGLFAADGGTFEEEGVLNDLRRTSIGTVED 104 +V N +T +P DGV + EEGV +R ++ + Sbjct: 103 ------------SVSTNNTVTFVNPIDGVESRKYTYPAPVKMEEGVFRTIRGINLQSTVG 150
Query: 103 DDLNAGLDG 77 ++ A DG Sbjct: 151 SEVKAAADG 159
>tr|Q4WI22|Q4WI22_ASPFU Polarized growth protein (Boi2), putative OS=Aspergillus fumigatus GN=AFUA_2G03360 PE=4 SV=1 Length = 995
Score = 37.0 bits (84), Expect = 0.68 Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 14/99 (14%) Frame = -1
Query: 451 VSEPVSLNSTDEALSELNAGDTQPPNGTHESADMLSSQNDVVQDGSEGSKTAKTAV---- 284 V+ P S ST +A + +TQPP + + M SS N + S T++ AV Sbjct: 104 VASPKSGESTPQASRHASISETQPPEVATDLSSMKSSPNQQHRSSSSPLPTSRLAVDIQQ 163
Query: 283 ----------AGEWSPMFKLATAVIENRVLTLSSPSDGV 197 G+ SP+ +VI+ + LS+P V Sbjct: 164 SIRQTLDGQLKGQDSPVMNETLSVIDEHITDLSTPRHSV 202
>tr|B0XUE3|B0XUE3_ASPFC Polarized growth protein Boi2, putative OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163) GN=AFUB_020430 PE=4 SV=1 Length = 995
Score = 37.0 bits (84), Expect = 0.68 Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 14/99 (14%) Frame = -1
Query: 451 VSEPVSLNSTDEALSELNAGDTQPPNGTHESADMLSSQNDVVQDGSEGSKTAKTAV---- 284 V+ P S ST +A + +TQPP + + M SS N + S T++ AV Sbjct: 104 VASPKSGESTPQASRHASISETQPPEVATDLSSMKSSPNQQHRSSSSPLPTSRLAVDIQQ 163
Query: 283 ----------AGEWSPMFKLATAVIENRVLTLSSPSDGV 197 G+ SP+ +VI+ + LS+P V Sbjct: 164 SIRQTLDGQLKGQDSPVMNETLSVIDEHITDLSTPRHSV 202
>tr|A8T2Q4|A8T2Q4_9VIBR Methyl-accepting chemotaxis protein OS=Vibrio campbellii AND4 GN=AND4_10084 PE=4 SV=1 Length = 623
Score = 36.6 bits (83), Expect = 0.89 Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 6/125 (4%) Frame = -1
Query: 481 IQLLGRKQQDVSEPVSLNSTDEALSELNAG-DTQPPNGTHESADMLSSQNDVV---QDGS 314 IQ + Q D+++ + N TD+ +EL G +T N H+ + S + ++ Q + Sbjct: 305 IQAVASGQGDLTQRLDTN-TDQEFAELAKGFNTFMANLQHQIIESKSISDQILSGTQITA 363
Query: 313 EGSKTAKTAVAGEWSPMFKLATAVIENRVLT--LSSPSDGVVQGLFAADGGTFEEEGVLN 140 EG++ + TA+ + + +LATA+ E V +++ + G AD T + V+N Sbjct: 364 EGARDSATAIQTQLQELEQLATAMHEMSVTATEVANNAQGAASAAKEADEATMQGSSVVN 423
Query: 139 DLRRT 125 + T Sbjct: 424 ESTAT 428
>tr|A0ZYR5|A0ZYR5_9CAUD Putative uncharacterized protein OS=Archaeal BJ1 virus PE=4 SV=1 Length = 447
Score = 36.2 bits (82), Expect = 1.2 Identities = 36/123 (29%), Positives = 52/123 (42%) Frame = -1
Query: 394 GDTQPPNGTHESADMLSSQNDVVQDGSEGSKTAKTAVAGEWSPMFKLATAVIENRVLTLS 215 GDT +G +SAD + ND DGS +A E + K T IE L Sbjct: 302 GDTPADDGGSKSADDTTMSNDNGDDGSGDGGVPDKTLAEENAEQIKELTETIETLTAALK 361
Query: 214 SPSDGVVQGLFAADGGTFEEEGVLNDLRRTSIGTVEDDDLNAGLDGDSSADLEGQIDSIE 35 V L DG T E V ++++G +ED + G+ D +L ++DSI Sbjct: 362 GEEPTVEIEL---DGETHE---VPKSQAKSALG-IEDGGADDGVQ-DEIKELRERLDSIS 413
Query: 34 TQA 26 Q+ Sbjct: 414 RQS 416
>tr|Q8T0B3|Q8T0B3_DROME LD13887p OS=Drosophila melanogaster GN=CG18632 PE=2 SV=1 Length = 479
Score = 36.2 bits (82), Expect = 1.2 Identities = 41/152 (26%), Positives = 52/152 (34%), Gaps = 2/152 (1%) Frame = +1
Query: 58 QDQPMNHHLSQH*DRHPQQCL*KFSEGHSEHLPPQMYLHQLRTTLVQHHQKGLTKSGLYF 237 Q Q H+ QH HP H++H P H L +L H Q G + Sbjct: 326 QQQQQQQHMLQHPHTHPHP--------HAQHSHP----HTLPHSLPHHLQPGTPTRSSHP 373
Query: 238 Q*LQ*PA*TLVTIHLPPLFWQFCYPQSHPEPRHFEN*ACRHFHVYHWEVEYHRHLA--HL 411 Q LQ P H PP P SHP H H + + H A H Sbjct: 374 Q-LQHPH------HYPPS------PHSHP-----------HHQTGHHGLPHAHHFAYAHG 409
Query: 412 RPHLCCSKTQVH*HPAASVPRVECLYFP*VPP 507 PH + HP A V + + +P PP Sbjct: 410 HPHPQQHHPHYYPHPHAHVQHMAAMGYPGPPP 441
>tr|Q0E8G5|Q0E8G5_DROME CG32043, isoform A OS=Drosophila melanogaster GN=CG32043 PE=4 SV=1 Length = 783
Score = 36.2 bits (82), Expect = 1.2 Identities = 41/152 (26%), Positives = 52/152 (34%), Gaps = 2/152 (1%) Frame = +1
Query: 58 QDQPMNHHLSQH*DRHPQQCL*KFSEGHSEHLPPQMYLHQLRTTLVQHHQKGLTKSGLYF 237 Q Q H+ QH HP H++H P H L +L H Q G + Sbjct: 630 QQQQQQQHMLQHPHTHPHP--------HAQHSHP----HTLPHSLPHHLQPGTPTRSSHP 677
Query: 238 Q*LQ*PA*TLVTIHLPPLFWQFCYPQSHPEPRHFEN*ACRHFHVYHWEVEYHRHLA--HL 411 Q LQ P H PP P SHP H H + + H A H Sbjct: 678 Q-LQHPH------HYPPS------PHSHP-----------HHQTGHHGLPHAHHFAYAHG 713
Query: 412 RPHLCCSKTQVH*HPAASVPRVECLYFP*VPP 507 PH + HP A V + + +P PP Sbjct: 714 HPHPQQHHPHYYPHPHAHVQHMAAMGYPGPPP 745
>tr|B3NCH2|B3NCH2_DROER GG15381 OS=Drosophila erecta GN=GG15381 PE=4 SV=1 Length = 772
Score = 35.8 bits (81), Expect = 1.5 Identities = 40/150 (26%), Positives = 51/150 (34%), Gaps = 2/150 (1%) Frame = +1
Query: 64 QPMNHHLSQH*DRHPQQCL*KFSEGHSEHLPPQMYLHQLRTTLVQHHQKGLTKSGLYFQ* 243 Q H+ QH HP H++H P H L +L H Q G + Q Sbjct: 622 QQQQQHMLQHPHTHPHP--------HAQHSHP----HTLPHSLPHHLQPGTPTRSSHPQ- 668
Query: 244 LQ*PA*TLVTIHLPPLFWQFCYPQSHP--EPRHFEN*ACRHFHVYHWEVEYHRHLAHLRP 417 L P H PP P SHP +P H + HF H +H H P Sbjct: 669 LPHPH------HYPPS------PHSHPHHQPGHHGHPHAHHFAYAHGHPHPQQHHPHYYP 716
Query: 418 HLCCSKTQVH*HPAASVPRVECLYFP*VPP 507 HP A V + + +P PP Sbjct: 717 -----------HPHAHVQHMAAMGYPGPPP 735
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