BP916496
Clone id YMU001_000088_C12
Library
Length 509
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000088_C12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TGTAGACGAAGTGACAAGTTTGGCACCCAAGTGTGCTCCCTTTTCCGGGTATATGCCCAG
ATCACTCTCTCCGTTCTCTCATTTGTGTCGACCTCTTCTCCTGTGTCATCATCGTATTTT
TCCACCATCACCCTGATATTCGTCAAGAAAATGGCACTGGCAAGTCCTTTCTTCCCTTGT
CTTTTTAAGAATTCAATGGTATTCTTTTCCAAGTGCTCATCCTTGTCAACGGTGAAGCCT
TTCACCTCCGTCAATGCAAGGATGCTGTTGATACGATCCCCCTCATGTTTGCTATCTCTG
TTGTTGCAAATCTCCAGAGTGCTCTCCAAGTCTGGCATTTGAATAGCTCTGGTTACCACA
TCCTCATATAAGTTATGCACACCAGCACGCCAAACCTTGAGTAAACCAGCATCTTTTAAC
AATCCACCTAAAGGGGACGTCTCTAGCCATTCGCTGGCCCGCTCAGGTAGATCAGGTGGG
GGTGAAGGGCCAAGCAGGACTGAAAGAAA
■■Homology search results ■■ -
sp_hit_id Q8R7T1
Definition sp|Q8R7T1|SYE2_THETN Glutamyl-tRNA synthetase 2 OS=Thermoanaerobacter tengcongensis
Align length 107
Score (bit) 38.1
E-value 0.024
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916496|Adiantum capillus-veneris mRNA, clone:
YMU001_000088_C12.
(509 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8R7T1|SYE2_THETN Glutamyl-tRNA synthetase 2 OS=Thermoanaerob... 38 0.024
sp|Q2UHC1|DBP10_ASPOR ATP-dependent RNA helicase dbp10 OS=Asperg... 32 2.3
sp|Q96ZL3|CBID_SULTO Putative cobalt-precorrin-6A synthase [deac... 32 2.3
sp|Q18823|LAM2_CAEEL Laminin-like protein lam-2 OS=Caenorhabditi... 30 5.0
sp|Q4R8G4|CE037_MACFA Uncharacterized protein C5orf37 homolog OS... 30 5.0
sp|Q97C22|PGP_THEVO Phosphoglycolate phosphatase OS=Thermoplasma... 30 6.6
sp|Q4V891|CE037_RAT Uncharacterized protein C5orf37 homolog OS=R... 30 6.6
sp|Q8NA72|CE037_HUMAN Uncharacterized protein C5orf37 OS=Homo sa... 30 6.6

>sp|Q8R7T1|SYE2_THETN Glutamyl-tRNA synthetase 2
OS=Thermoanaerobacter tengcongensis GN=gltX2 PE=3 SV=1
Length = 485

Score = 38.1 bits (87), Expect = 0.024
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 7/107 (6%)
Frame = -1

Query: 392 WRAGVHNLYEDVVTRAIQMPDLESTLEICNNRDSKHEGDRI------NSILALTEVKGFT 231
W V +LY+D ++ Q+ D+ T + + + G+ I NSI L KG+
Sbjct: 359 WLKDVISLYKDGLSYVAQIVDMAKTFFV---EEVDYTGEMIEFLKSPNSIKVLEAFKGYL 415

Query: 230 VDKDEHLEKNTIEFLKRQGKK-GLASAIFLTNIRVMVEKYDDDTGEE 93
DK E E + E++K+ K+ G+ F IR+ V TGEE
Sbjct: 416 KDKSEITEDDVREWMKKAQKELGVKGKEFFMPIRIAV------TGEE 456


>sp|Q2UHC1|DBP10_ASPOR ATP-dependent RNA helicase dbp10
OS=Aspergillus oryzae GN=dbp10 PE=3 SV=1
Length = 929

Score = 31.6 bits (70), Expect = 2.3
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Frame = -1

Query: 326 ESTLEICNNRDSKHEGDR-INSILALTEVKGFTVDKDEHLEKNTIEFLK--RQGKKGLAS 156
E+ E+ N R+ KHEGD I++I + + K E EK + +F++ G KG A+
Sbjct: 608 ETIFEVHNRRNGKHEGDEAIDTIKRIRTTVDYKKKKREMAEKQS-DFVEDASSGNKGEAN 666

Query: 155 AIFLTNIRVMVEKYDDDTGEEVDTN 81
T ++ ++D GE V N
Sbjct: 667 ETEETG--AQPDEDEEDIGEGVPDN 689


>sp|Q96ZL3|CBID_SULTO Putative cobalt-precorrin-6A synthase
[deacetylating] OS=Sulfolobus tokodaii GN=cbiD PE=3 SV=1
Length = 354

Score = 31.6 bits (70), Expect = 2.3
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Frame = -1

Query: 380 VHNLYEDVVTRAIQMPDLESTLEICNNRDSKHEGDRIN--SILALTEVKGFTVDKDEHLE 207
++ + D V I++PD E E+ N+D IN SIL T ++ + + DE+LE
Sbjct: 132 INEVTTDGVKVRIEVPDGEKIAELTMNKDV----GVINGISILGTTGIE-YPISDDEYLE 186

Query: 206 --KNTIEFLKRQGKKGLASAIFLTNIRVMVEKYDDD 105
K+ I +K GKK L A T+ ++Y D+
Sbjct: 187 HIKSEICVVKALGKKKLILAPGNTSFEFARKRYGDN 222


>sp|Q18823|LAM2_CAEEL Laminin-like protein lam-2 OS=Caenorhabditis
elegans GN=lam-2 PE=1 SV=2
Length = 1535

Score = 30.4 bits (67), Expect = 5.0
Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Frame = -1

Query: 371 LYEDVVTRAIQMPDLESTLEICNNRDSKHEGDRINSILALTEVKGFTVDKDEHLE----- 207
+ + V T + D E+ L++ +K E R +++ V+G D+ ++
Sbjct: 1355 IVDSVSTADKTLKDAEAALQVLEEFGAKIEKSRNDAVAEFAGVEGINQRLDDIIDAQDKR 1414

Query: 206 KNTIEFLKRQGKKGLASA-IFLTNIRVMVEKYDDDTGEEVDTNERTERV 63
+N++ K+ SA + L + ++Y D +VDT + TE V
Sbjct: 1415 RNSLPIDKQFVIDYRKSADVLLNETHALADRYKDIIHSDVDTRDSTEAV 1463


>sp|Q4R8G4|CE037_MACFA Uncharacterized protein C5orf37 homolog
OS=Macaca fascicularis GN=QtsA-12524 PE=2 SV=1
Length = 547

Score = 30.4 bits (67), Expect = 5.0
Identities = 24/109 (22%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Frame = -1

Query: 392 WRAGVHNLYEDVVTRAIQMPDLESTLEICNNRDSKHEGDRINSILALTEVKGFTVDKDEH 213
WR+ V ++DVV RA Q E ++I N+ ++K + + E + + +H
Sbjct: 260 WRSVVQKQWKDVVERACQARAEEVCVQISNDYEAK-----VAMLSGALENAKAEIQRMQH 314

Query: 212 LEKNTIEFLKRQGKKGLASAIFLTNIRVM-VEKYDDDTGEEVDTNERTE 69
+++ + +K+ +G+ + N+ M + + +DTG + N++ E
Sbjct: 315 EKEHFEDSMKKAFMRGVCA----LNLEAMTIFQNRNDTGVDSTNNKKEE 359


>sp|Q97C22|PGP_THEVO Phosphoglycolate phosphatase OS=Thermoplasma
volcanium GN=TV0283 PE=3 SV=1
Length = 224

Score = 30.0 bits (66), Expect = 6.6
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1

Query: 260 LALTEVKGFTVDKDEHLEKNTIEFLKRQGKKGLASAIFLTNI 135
L +V G DKD + IEF+++ KKG+ ++ N+
Sbjct: 4 LVAIDVDGTLTDKDRLISTRAIEFIRKAEKKGIIVSLLSGNV 45


>sp|Q4V891|CE037_RAT Uncharacterized protein C5orf37 homolog
OS=Rattus norvegicus PE=2 SV=1
Length = 558

Score = 30.0 bits (66), Expect = 6.6
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Frame = -1

Query: 392 WRAGVHNLYEDVVTRAIQMPDLESTLEICNNRDSKHEGDRINSILALTEVKGFTVDKDEH 213
WR+ V ++DVV RA Q E ++I N+ ++K + A E++ +KD H
Sbjct: 271 WRSVVQRQWKDVVERACQARAEEVCVQISNDYEAKLAMLSLALENAKAEIQRMHQEKD-H 329

Query: 212 LEKNTIEFLKRQGKKGLASAIFLTNIRVM-VEKYDDDTGEEVDTNERTE 69
E + KK + N+ M + + +D G + N++ E
Sbjct: 330 FEDSM--------KKAFMRGVCALNLEAMTIFQNKNDAGIDFTNNKKEE 370


>sp|Q8NA72|CE037_HUMAN Uncharacterized protein C5orf37 OS=Homo
sapiens GN=C5orf37 PE=1 SV=2
Length = 575

Score = 30.0 bits (66), Expect = 6.6
Identities = 24/110 (21%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Frame = -1

Query: 395 VWRAGVHNLYEDVVTRAIQMPDLESTLEICNNRDSKHEGDRINSILALTEVKGFTVDKDE 216
VWR+ V ++DVV RA Q E ++I N+ ++K + + E + + +
Sbjct: 287 VWRSVVQKQWKDVVERACQARAEEVCIQISNDYEAK-----VAMLSGALENAKAEIQRMQ 341

Query: 215 HLEKNTIEFLKRQGKKGLASAIFLTNIRVM-VEKYDDDTGEEVDTNERTE 69
H +++ + +K+ +G+ + N+ M + + +D G + N++ E
Sbjct: 342 HEKEHFEDSMKKAFMRGVCA----LNLEAMTIFQNRNDAGIDSTNNKKEE 387


tr_hit_id A8B349
Definition tr|A8B349|A8B349_GIALA Putative uncharacterized protein OS=Giardia lamblia ATCC 50803
Align length 97
Score (bit) 40.0
E-value 0.065
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916496|Adiantum capillus-veneris mRNA, clone:
YMU001_000088_C12.
(509 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A8B349|A8B349_GIALA Putative uncharacterized protein OS=Giard... 40 0.065
tr|A9TPT2|A9TPT2_PHYPA Predicted protein OS=Physcomitrella paten... 36 0.94
tr|Q6FVK1|Q6FVK1_CANGA Strain CBS138 chromosome A complete seque... 36 0.94
tr|A9EYQ5|A9EYQ5_SORC5 Protein kinase OS=Sorangium cellulosum (s... 36 1.2
tr|A7VWW1|A7VWW1_9CLOT Putative uncharacterized protein OS=Clost... 35 2.1
tr|Q2G393|Q2G393_NOVAD Putative uncharacterized protein OS=Novos... 34 3.6
tr|A6SM80|A6SM80_BOTFB Putative uncharacterized protein OS=Botry... 34 4.7
tr|B3VTC3|B3VTC3_SORBI Putative retroelement protein OS=Sorghum ... 33 6.1
tr|Q23WM4|Q23WM4_TETTH Cyclic nucleotide-binding domain containi... 33 6.1
tr|A5UX83|A5UX83_ROSS1 Bacterial peptide chain release factor 1 ... 33 8.0

>tr|A8B349|A8B349_GIALA Putative uncharacterized protein OS=Giardia
lamblia ATCC 50803 GN=GL50803_6542 PE=4 SV=1
Length = 938

Score = 40.0 bits (92), Expect = 0.065
Identities = 30/97 (30%), Positives = 46/97 (47%)
Frame = -1

Query: 371 LYEDVVTRAIQMPDLESTLEICNNRDSKHEGDRINSILALTEVKGFTVDKDEHLEKNTIE 192
+ ED++ + ++ DL++T+ +K + N LT+ +G + EHL E
Sbjct: 451 MQEDLLRQESKVLDLQNTI-------NKLRAEVSNKNALLTQARGIIASQKEHL--GGAE 501

Query: 191 FLKRQGKKGLASAIFLTNIRVMVEKYDDDTGEEVDTN 81
KRQGK G + V V YDDDTG + D N
Sbjct: 502 KEKRQGK-GASQKSAERRSMVPVASYDDDTGADADPN 537


>tr|A9TPT2|A9TPT2_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_95558 PE=4 SV=1
Length = 238

Score = 36.2 bits (82), Expect = 0.94
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Frame = -1

Query: 344 IQMPDLESTLEICNNRDS--KHEGDRINSILALTEVKGFTVDKDEHLEKNTIEFLKRQGK 171
+Q+ +L + EI N+ S H G + L + + F D D +K+ E+++R K
Sbjct: 95 VQLFELATVPEIRNHMKSIIGHSGGSWEKLFQLLKNEYFLEDSDRVTKKSFFEWIERH-K 153

Query: 170 KGLASAIFLTNIRVMVEKYDDDTGEEVDTN-ERTERVIWAYTRK 42
K L + L +++E D++ EE+ TN E+ E VI ++
Sbjct: 154 KDLLAMKLLKKFEILLE--DEEEVEELTTNWEKVEEVIGVLVKR 195


>tr|Q6FVK1|Q6FVK1_CANGA Strain CBS138 chromosome A complete sequence
OS=Candida glabrata GN=CAGL0E01265g PE=4 SV=1
Length = 2095

Score = 36.2 bits (82), Expect = 0.94
Identities = 19/94 (20%), Positives = 47/94 (50%)
Frame = -1

Query: 371 LYEDVVTRAIQMPDLESTLEICNNRDSKHEGDRINSILALTEVKGFTVDKDEHLEKNTIE 192
L++ + ++ ++++ +E K ++I+ I+ +E K DEH+ K ++
Sbjct: 875 LHDCSIIETKKLEEMQTQIEQPTIEMLKETAEKIDCIVMTSEEK---TKLDEHMAKPPLD 931

Query: 191 FLKRQGKKGLASAIFLTNIRVMVEKYDDDTGEEV 90
+LK + ++ + L R ++ K + TG+E+
Sbjct: 932 YLKEKARRQRKELVDLVEFRELIRKTTNPTGDEI 965


>tr|A9EYQ5|A9EYQ5_SORC5 Protein kinase OS=Sorangium cellulosum
(strain So ce56) GN=sce7396 PE=4 SV=1
Length = 448

Score = 35.8 bits (81), Expect = 1.2
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +3

Query: 126 HHPDIRQENGTGKSFLPLSF*EFNGILFQVLILVNGEAFH--LRQCKDAVDTIPLMFAIS 299
HHP++ + G E +G+L+QV+ L++GE + LR+ K A +PL FA+
Sbjct: 70 HHPNVAETIDVG---------EEDGVLYQVMELIDGEPLNLVLRESK-ARGGLPLPFALR 119

Query: 300 VVANLQSALQVWH 338
+VA L H
Sbjct: 120 IVAEAALGLHAAH 132


>tr|A7VWW1|A7VWW1_9CLOT Putative uncharacterized protein
OS=Clostridium leptum DSM 753 GN=CLOLEP_03084 PE=4 SV=1
Length = 381

Score = 35.0 bits (79), Expect = 2.1
Identities = 23/73 (31%), Positives = 35/73 (47%)
Frame = -1

Query: 326 ESTLEICNNRDSKHEGDRINSILALTEVKGFTVDKDEHLEKNTIEFLKRQGKKGLASAIF 147
ES LE +D GD I ++ TE+KGF+VD++E + F K+ G K
Sbjct: 82 ESALENVRTKDMGEVGDMITGLM--TELKGFSVDEEE--KGGFFGFFKKTGNKIATMKAK 137

Query: 146 LTNIRVMVEKYDD 108
+ V V+K +
Sbjct: 138 YDKVEVNVDKISE 150


>tr|Q2G393|Q2G393_NOVAD Putative uncharacterized protein
OS=Novosphingobium aromaticivorans (strain DSM 12444)
GN=Saro_3245 PE=4 SV=1
Length = 81

Score = 34.3 bits (77), Expect = 3.6
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3

Query: 36 LPFPGICPDHSLRSLICVDLFS 101
+P PGIC HSLRSL C +FS
Sbjct: 38 IPIPGICSRHSLRSLACFAVFS 59


>tr|A6SM80|A6SM80_BOTFB Putative uncharacterized protein
OS=Botryotinia fuckeliana (strain B05.10) GN=BC1G_13959
PE=4 SV=1
Length = 547

Score = 33.9 bits (76), Expect = 4.7
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = -1

Query: 209 EKNTIEFLKRQGKKGLASAIFLTNIRVMVEKYDDDTGEEVDTNERTERVIWAYTRKREHT 30
E+N ++ R G + IF N+ + + + T EEV NE ++ Y + E+T
Sbjct: 102 EENVTLWITRNGGFQIVDNIFFANLSKHLSDWTNRTDEEVLWNE----LLAYYEDRLENT 157

Query: 29 WVPNLSLRL 3
++PNL L L
Sbjct: 158 YIPNLRLSL 166


>tr|B3VTC3|B3VTC3_SORBI Putative retroelement protein OS=Sorghum
bicolor PE=4 SV=1
Length = 1029

Score = 33.5 bits (75), Expect = 6.1
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +2

Query: 299 CCCKSPECSPSLAFE*LWLPHPHISYAHQHAKP 397
CCC SP S A+ WL HPH+ H HA P
Sbjct: 24 CCCPSP--SMGNAYSRCWL-HPHLPLGHGHAPP 53


>tr|Q23WM4|Q23WM4_TETTH Cyclic nucleotide-binding domain containing
protein OS=Tetrahymena thermophila SB210
GN=TTHERM_00923210 PE=4 SV=1
Length = 866

Score = 33.5 bits (75), Expect = 6.1
Identities = 23/101 (22%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Frame = -1

Query: 389 RAGVHNLYEDVVTRAIQMPDLESTLE--ICNNRDSKHEGDRINSILALTEVKGFTVDKDE 216
+ +N YED + I L+ ++ + NN DS + G + E+K + DE
Sbjct: 349 KVNTYNKYEDTFQKMIVKSPLKQKIKDMLYNNEDSLNNGGIFHRKFNQEELKKYNKKFDE 408

Query: 215 HLEKNTIEFLKRQGKKGLASAIFLTNIRVMVEKYDDDTGEE 93
LEK +E K+ ++ +F+ ++ ++D G +
Sbjct: 409 ELEKRRLEEQKKPEFLNSSAKLFIHKLQY---QFDSKLGSD 446


>tr|A5UX83|A5UX83_ROSS1 Bacterial peptide chain release factor 1
(BRF-1) OS=Roseiflexus sp. (strain RS-1) GN=RoseRS_2868
PE=4 SV=1
Length = 364

Score = 33.1 bits (74), Expect = 8.0
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = -1

Query: 251 TEVKGFTVDKDEHLEKNTIEFLKRQGKKGLASAIFLTNIRVMVEKYDDDTGEEVDTNERT 72
T++K + +D + KN I L RQG+ G +A+F ++ M +Y + G +VD T
Sbjct: 97 TDIKVLLLPRDPNDSKNVIMEL-RQGEGGDEAALFAADLFRMYTRYAEQRGWDVDVISAT 155

Query: 71 E 69
E
Sbjct: 156 E 156