BP916454 |
Clone id |
YMU001_000087_H03 |
Library |
YMU01 |
Length |
484 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000087_H03. |
Accession |
BP916454 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL4119Contig1 |
Sequence |
GCCAGAGATGAGCCCTTGGAGGTTCCTGAAGATGTAGAAGATCTACAACACCTAGAGGAA TAACTAGAGACACAAGATGAAGAAGAGCAACTGTTAACTATAGAGGAGGAGACACACCTC CAAACTCTGATTGAAAAATCCACAGCTGAAGACCACAAGGCAGCTTTGGAGTGAGAGACA TGAATGTTAAAATTAGTAGGAGTCCAAGGGCTTGCCACAATGTGCTTAGGGAGGAACGGA TGCAACCTTCACTCCCATACTCTCTCCTAAAGTATGAAGTGTTGGTGATCAAGAAAAGAG TCAAAGCGAAAGCAACAGAGCCAATCTATGAGGGAAATGTCAAAGATTCAAATACTGCAA AGAATAAAGTGGACTCCCAACCAAAGTGGAGAAAATCGTGGCTCCTCAAGTGCCCCGGAT TTCTAAAGTACTTGGTGGGAGCCCCCAAAAACATCAGAGATGATACTCTATTTTGCCTAG TCCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q09966 |
Definition |
sp|Q09966|YS97_CAEEL Putative G-protein coupled receptor B0244.7 OS=Caenorhabditis elegans |
Align length |
128 |
Score (bit) |
35.4 |
E-value |
0.14 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A2SPU2 |
Definition |
tr|A2SPU2|A2SPU2_METLZ Cation transporter OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) |
Align length |
66 |
Score (bit) |
38.5 |
E-value |
0.17 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916454|Adiantum capillus-veneris mRNA, clone: YMU001_000087_H03. (484 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A2SPU2|A2SPU2_METLZ Cation transporter OS=Methanocorpusculum ... 39 0.17 tr|A8BTK5|A8BTK5_GIALA DinF protein OS=Giardia lamblia ATCC 5080... 36 0.82 tr|Q4JWT7|Q4JWT7_CORJK Putative iron ABC transport system, solut... 36 0.83 tr|Q8SIU5|Q8SIU5_XANHE NADH-ubiquinone oxidoreductase chain 2 OS... 35 1.8 tr|Q2BHQ6|Q2BHQ6_9GAMM Putative uncharacterized protein OS=Neptu... 35 2.4 tr|A8N574|A8N574_COPC7 Predicted protein OS=Coprinopsis cinerea ... 35 2.4 tr|A7AAT3|A7AAT3_9PORP Putative uncharacterized protein OS=Parab... 34 3.1 tr|A3UYN7|A3UYN7_VIBSP Phosphate ABC transporter, permease prote... 34 4.1 tr|Q4PB62|Q4PB62_USTMA Putative uncharacterized protein OS=Ustil... 34 4.1 tr|Q0QAF5|Q0QAF5_9PICI NADH-ubiquinone oxidoreductase chain 2 OS... 33 5.3 tr|Q0H546|Q0H546_9PICI NADH-ubiquinone oxidoreductase chain 2 (F... 33 5.3 tr|A9WD08|A9WD08_CHLAA Putative uncharacterized protein OS=Chlor... 33 5.3 tr|B7VJQ5|B7VJQ5_VIBSP ABC transporter: transmembrane protein OS... 33 5.3 tr|B2QQN1|B2QQN1_9CHLR Putative uncharacterized protein OS=Chlor... 33 5.3 tr|A7YT20|A7YT20_FRATU Putative uncharacterized protein OS=Franc... 33 5.3 tr|A3XVT4|A3XVT4_9VIBR Phosphate ABC transporter, permease prote... 33 5.3 tr|A4X351|A4X351_SALTO Peptidase M48, Ste24p OS=Salinispora trop... 33 7.0 tr|A5L7P7|A5L7P7_9GAMM Phosphate ABC transporter, permease prote... 33 7.0 tr|Q5FZP8|Q5FZP8_NATTE NADH-ubiquinone oxidoreductase chain 2 OS... 33 9.1 tr|Q2M5H6|Q2M5H6_NATTE NADH-ubiquinone oxidoreductase chain 2 OS... 33 9.1 tr|Q0QAG2|Q0QAG2_9PICI NADH-ubiquinone oxidoreductase chain 2 OS... 33 9.1 tr|Q87S49|Q87S49_VIBPA Phosphate ABC transporter, permease prote... 33 9.1 tr|A9CIW6|A9CIW6_AGRT5 ABC transporter, membrane spanning protei... 33 9.1 tr|A7MT99|A7MT99_VIBHB Putative uncharacterized protein OS=Vibri... 33 9.1 tr|A8T763|A8T763_9VIBR Phosphate ABC transporter, permease prote... 33 9.1 tr|A7AFX0|A7AFX0_9PORP Putative uncharacterized protein OS=Parab... 33 9.1 tr|A6B360|A6B360_VIBPA A transmembrane component of the phosphat... 33 9.1 tr|A6ATC5|A6ATC5_VIBHA A transmembrane component of the phosphat... 33 9.1 tr|A8X809|A8X809_CAEBR Putative uncharacterized protein OS=Caeno... 33 9.1
>tr|A2SPU2|A2SPU2_METLZ Cation transporter OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=Mlab_0172 PE=4 SV=1 Length = 493
Score = 38.5 bits (88), Expect = 0.17 Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 4/66 (6%) Frame = -1
Query: 325 IGSVAFALTLF----LITNTSYFRREYGSEGCIRSSLSTLWQALGLLLILTFMSLTPKLP 158 +G VAF LT+ L+T Y R E GSE + S ++T +Q + LILT +++ L Sbjct: 141 LGIVAFTLTVASRSGLVTQNLY-RSEGGSESFMPSVIATAFQMWKIYLILTLIAIIAILL 199
Query: 157 CGLQLW 140 GL LW Sbjct: 200 TGLSLW 205
>tr|A8BTK5|A8BTK5_GIALA DinF protein OS=Giardia lamblia ATCC 50803 GN=GL50803_16841 PE=4 SV=1 Length = 571
Score = 36.2 bits (82), Expect = 0.82 Identities = 24/71 (33%), Positives = 36/71 (50%) Frame = -1
Query: 373 STLFFAVFESLTFPS*IGSVAFALTLFLITNTSYFRREYGSEGCIRSSLSTLWQALGLLL 194 S L F +F + I S +FA + + T YF R Y G + L+ L ++GLLL Sbjct: 331 SLLVFYLFRHIFM---ISSRSFATSYYTSMQTYYFHRFYQCAGTVLVRLTILVYSIGLLL 387
Query: 193 ILTFMSLTPKL 161 F++L+P L Sbjct: 388 GFIFLALSPFL 398
>tr|Q4JWT7|Q4JWT7_CORJK Putative iron ABC transport system, solute-binding protein OS=Corynebacterium jeikeium (strain K411) GN=irp6A PE=3 SV=1 Length = 394
Score = 36.2 bits (82), Expect = 0.83 Identities = 27/72 (37%), Positives = 33/72 (45%), Gaps = 10/72 (13%) Frame = +3
Query: 285 VIKKRVKAKATEPIYEGNVKDSNTAKNKVDSQPK---WRKSWLLKCPGFLKY-----LVG 440 ++ K KAK Y G VKD NK +PK WR + + C G +K LV Sbjct: 188 LLGKEDKAKEFNDFYSGKVKDVTDRANKAKDKPKTLVWRAAGMKDCCGTVKNSNLGDLVN 247
Query: 441 AP--KNIRDDTL 470 A KNI DD L Sbjct: 248 AAGGKNIGDDLL 259
>tr|Q8SIU5|Q8SIU5_XANHE NADH-ubiquinone oxidoreductase chain 2 OS=Xantusia henshawi GN=ND2 PE=3 SV=1 Length = 344
Score = 35.0 bits (79), Expect = 1.8 Identities = 31/125 (24%), Positives = 51/125 (40%), Gaps = 5/125 (4%) Frame = -1
Query: 388 HFGWESTLFFAVFESLTFPS*IGSVAFALTLFLITNTSYFRREYGSEGCIRSSLSTLWQA 209 H GW + ++ E++T + + + T+F++ NTSY + +ST W Sbjct: 186 HLGW-MYIAISMNETITMLTLLIYILLTTTIFMLMNTSYSKT--------MKDMSTTWTH 236
Query: 208 LGLLLILTFMSL-----TPKLPCGLQLWIFQSEFGGVSPPL*LTVALLHLVSLVIPLGVV 44 L ILT ++L P L L W+ E + + HL + +PL Sbjct: 237 SPTLTILTLLTLLSLGGLPPLTGFLPKWLILQE-----------LIIHHLTPIAVPLAFS 285
Query: 43 DLLHL 29 LL L Sbjct: 286 ALLSL 290
>tr|Q2BHQ6|Q2BHQ6_9GAMM Putative uncharacterized protein OS=Neptuniibacter caesariensis GN=MED92_14158 PE=4 SV=1 Length = 391
Score = 34.7 bits (78), Expect = 2.4 Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 6/106 (5%) Frame = -1
Query: 409 LRSHDFLHFGWESTLFFAVFESLTFPS*IGSVAFALTLFLITNTSYFRREYGSEGCIRSS 230 L H L FGW+ F++ + +V++ + +F+I T+ +E I Sbjct: 151 LGGHINLQFGWQYLFHFSLL--------LSTVSWLIVMFMIPETA---KEKTDSLRITRV 199
Query: 229 LSTLWQAL------GLLLILTFMSLTPKLPCGLQLWIFQSEFGGVS 110 LS WQ L G L TF++ L G +I SE GG S Sbjct: 200 LSQYWQVLKAPNYLGYALSTTFIACAFYLFIGSAPYIVDSEMGGTS 245
>tr|A8N574|A8N574_COPC7 Predicted protein OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_04456 PE=4 SV=1 Length = 1394
Score = 34.7 bits (78), Expect = 2.4 Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Frame = -1
Query: 472 NRVSSLMFLGAPTK---YFRNPGHLRSHDFLHFGWESTLFFAVFESLTFPS*IGSVAFAL 302 N +S+ M +GAP NP H SH F+ F W++ + F E F S + + Sbjct: 1152 NSLSAKMEIGAPMAALYLLGNPDHYSSHSFVSFYWKNYVNFVFAEWAKFESNMEGDSPDA 1211
Query: 301 TLFLITNTSYFRREYGSE 248 T L N R EY S+ Sbjct: 1212 TRTLRENLDGNRSEYDSD 1229
>tr|A7AAT3|A7AAT3_9PORP Putative uncharacterized protein OS=Parabacteroides merdae ATCC 43184 GN=PARMER_00486 PE=3 SV=1 Length = 223
Score = 34.3 bits (77), Expect = 3.1 Identities = 18/57 (31%), Positives = 31/57 (54%) Frame = -1
Query: 211 ALGLLLILTFMSLTPKLPCGLQLWIFQSEFGGVSPPL*LTVALLHLVSLVIPLGVVD 41 A+G ++ S+ P L CG +LWI + +GG P + LL++ + + PL + D Sbjct: 20 AVGKPCVVPSGSMEPTLLCGDRLWINKLAYGGRLPKRWADIPLLNVFTWIRPLRIAD 76
>tr|A3UYN7|A3UYN7_VIBSP Phosphate ABC transporter, permease protein OS=Vibrio splendidus 12B01 GN=V12B01_08964 PE=3 SV=1 Length = 569
Score = 33.9 bits (76), Expect = 4.1 Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 8/55 (14%) Frame = -1
Query: 154 GLQLWIFQSEF-------GGVSPPL*LTVALLHLVSLVI-PLGVVDLLHLQEPPR 14 G Q+W F SE GGV P + TV L+ L+S+V+ PLGVV ++L E R Sbjct: 296 GKQVWKFLSENPRDSNSEGGVFPAIFGTVLLVILMSIVVMPLGVVAAIYLHEYAR 350
>tr|Q4PB62|Q4PB62_USTMA Putative uncharacterized protein OS=Ustilago maydis GN=UM02651.1 PE=4 SV=1 Length = 484
Score = 33.9 bits (76), Expect = 4.1 Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 3/107 (2%) Frame = -1
Query: 484 GTRQNRVSSLMF---LGAPTKYFRNPGHLRSHDFLHFGWESTLFFAVFESLTFPS*IGSV 314 G R NR+ +++ +G P P HL H +L T FES+ + +G Sbjct: 257 GLRANRLWAILVNAAIGVPYAMAFKPYHLEHHKYLGEDGTDTDLPTKFESVVLRNVLGKA 316
Query: 313 AFALTLFLITNTSYFRREYGSEGCIRSSLSTLWQALGLLLILTFMSL 173 FA Y R G +R+ T+W L + IL F +L Sbjct: 317 FFATFQIFF----YALR----PGFVRAQRPTIWHLLNITFILLFNTL 355
>tr|Q0QAF5|Q0QAF5_9PICI NADH-ubiquinone oxidoreductase chain 2 OS=Dryocopus martius GN=ND2 PE=3 SV=1 Length = 346
Score = 33.5 bits (75), Expect = 5.3 Identities = 40/135 (29%), Positives = 54/135 (40%), Gaps = 9/135 (6%) Frame = -1
Query: 388 HFGWESTLFFAVFESLTFPS*IGSVAFALTLFLITNTSYFRREYGSEGCIRSSLSTLWQA 209 H GW T+ LT + + F T+FL NTS ++LSTL A Sbjct: 186 HLGW-MTIIIIYTPKLTLLAFLLYTLFTSTIFLSFNTSNI-----------TNLSTLMSA 233
Query: 208 ------LGLLLILTFMSLT--PKLPCGLQLWIFQSEFGGVSPPL*-LTVALLHLVSLVIP 56 L L+LT +SL P L W+ E L LT+ALL L+SL Sbjct: 234 WTKTPMLNATLMLTLLSLAGLPPFTGFLPKWLILQELTKQEMTLAALTIALLSLLSLFFY 293
Query: 55 LGVVDLLHLQEPPRA 11 L + + PP + Sbjct: 294 LRLTYFSSITLPPNS 308
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