BP916438 |
Clone id |
YMU001_000087_F10 |
Library |
YMU01 |
Length |
536 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000087_F10. |
Accession |
BP916438 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GATTGCAGTGGCAAGGGAGGCCAACGGGTTGCGAACTGGGTGCGCGAGGGTGAAGAAATC CAAGGGGCAGCGGAGCGCGACTGCCGTCTGCAGGGGTAAGCGAAGCCGAGTTCAAGTGCG TGAGGGCCCCTGTTGTCTGGGAGCTCACGAGGAGAGTCATCAAAGGGGGTTGAGGAGGAG TGAAGGAGGATCTGCATCTCCCTTCTTTGTGGGTGCCTCCCCGTGTAGGCGGGTGGAGAT GGTCGGGAGATGGGCTTCTGAAGTAGGGTCAAGAGGGTCTCCTGAAACCATGCCCGTGCA AGCTTACATGGATGAGCACGAGAGCTTGGAAATGGTTGTGCAGGAGCTCGTGTACCGATT CGAGATGATGATATCTGATATTTGAAGCTAATGCATTAGATTTTGCTGGTTTTGTTGTAT GTATTGATCGAGAAAAACCTCTGGCAAGGTGTCTAGAGCTGTGCCAGATGTGGGATGCTG GAGTGTGTGCGTCTGGCCATCCCTTCCCCCATCATCTTTTATTCGCGGCCGCGAAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q4K4X8 |
Definition |
sp|Q4K4X8|OSTA_PSEF5 LPS-assembly protein OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) |
Align length |
118 |
Score (bit) |
35.8 |
E-value |
0.12 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B0DHT8 |
Definition |
tr|B0DHT8|B0DHT8_LACBS Predicted protein OS=Laccaria bicolor (strain S238N-H82) |
Align length |
104 |
Score (bit) |
39.7 |
E-value |
0.091 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916438|Adiantum capillus-veneris mRNA, clone: YMU001_000087_F10. (518 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B0DHT8|B0DHT8_LACBS Predicted protein OS=Laccaria bicolor (st... 40 0.091 tr|B6UE73|B6UE73_MAIZE Putative uncharacterized protein OS=Zea m... 37 0.59 tr|A4HBY3|A4HBY3_LEIBR Putative uncharacterized protein OS=Leish... 36 1.3 tr|Q10MF1|Q10MF1_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 35 1.7 tr|Q8T5H0|Q8T5H0_ANOGA Putative differentiation regulator OS=Ano... 35 1.7 tr|Q7PUM7|Q7PUM7_ANOGA AGAP001608-PA (Fragment) OS=Anopheles gam... 35 1.7 tr|B1ZSN7|B1ZSN7_OPITP Thioredoxin OS=Opitutus terrae (strain DS... 35 2.2 tr|B5GB32|B5GB32_9ACTO Oligopeptide/dipeptide ABC transporter OS... 34 3.8 tr|A0R658|A0R658_MYCS2 Putative uncharacterized protein OS=Mycob... 34 5.0 tr|B0WGV7|B0WGV7_CULQU Putative uncharacterized protein OS=Culex... 34 5.0 tr|A1XF85|A1XF85_MYTCA Foot protein-4 variant-2 OS=Mytilus calif... 34 5.0 tr|A1XF84|A1XF84_MYTCA Foot protein-4 variant-1 OS=Mytilus calif... 34 5.0 tr|Q4SGY5|Q4SGY5_TETNG Chromosome 14 SCAF14590, whole genome sho... 33 6.5 tr|Q29ML5|Q29ML5_DROPS GA21064 OS=Drosophila pseudoobscura pseud... 33 6.5 tr|B8P7F2|B8P7F2_9APHY Predicted protein OS=Postia placenta Mad-... 33 6.5 tr|Q47TV3|Q47TV3_THEFY Similar to ATPases involved in chromosome... 33 8.5 tr|A8LCA7|A8LCA7_FRASN Serine/threonine protein kinase OS=Franki... 33 8.5 tr|A5CTD1|A5CTD1_CLAM3 Putative integrase/recombinase OS=Claviba... 33 8.5 tr|Q9FN39|Q9FN39_ARATH Early nodulin-like protein 1 OS=Arabidops... 33 8.5 tr|Q84LE0|Q84LE0_ARATH Phytocyanin protein, PUP2 OS=Arabidopsis ... 33 8.5 tr|Q6ZLH3|Q6ZLH3_ORYSJ Putative uncharacterized protein OJ1174_G... 33 8.5 tr|Q6K1S4|Q6K1S4_ORYSJ Putative uncharacterized protein B1215B07... 33 8.5 tr|Q682V1|Q682V1_ARATH Predicted GPI-anchored protein OS=Arabido... 33 8.5 tr|Q49I29|Q49I29_9SOLA 120 kDa pistil extensin-like protein (Fra... 33 8.5 tr|B7G320|B7G320_PHATR Predicted protein OS=Phaeodactylum tricor... 33 8.5 tr|Q2URG2|Q2URG2_ASPOR Synaptic vesicle protein EHS-1 and relate... 33 8.5 tr|B8MYF5|B8MYF5_ASPFL EF hand domain protein OS=Aspergillus fla... 33 8.5 tr|B2AA86|B2AA86_PODAN Predicted CDS Pa_1_3200 OS=Podospora anse... 33 8.5 tr|B0D2P7|B0D2P7_LACBS Predicted protein OS=Laccaria bicolor (st... 33 8.5 tr|A6SRM8|A6SRM8_BOTFB Putative uncharacterized protein OS=Botry... 33 8.5
>tr|B0DHT8|B0DHT8_LACBS Predicted protein OS=Laccaria bicolor (strain S238N-H82) GN=LACBIDRAFT_329365 PE=4 SV=1 Length = 1015
Score = 39.7 bits (91), Expect = 0.091 Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 2/104 (1%) Frame = -1
Query: 344 PAQPFPSSRAHPCKLARAW-FQETLLTLLQKPISRPSP-PAYTGRHPQRREMQILLHSSS 171 P+ P P HP L + L T++ +R +P PAY HP + + H+ Sbjct: 373 PSSPKPKPSKHPHTLPNGVRLRLALGTIINDLFARQAPHPAYRHTHPSPPKTE---HTPP 429
Query: 170 TPFDDSPRELPDNRGPHALELGFAYPCRRQSRSAAPWISSPSRT 39 TP S +LP+ P A G P +Q + AP+ +P RT Sbjct: 430 TPIPASFSDLPEALIPLATVSGAFSPLPKQPQPIAPYRYTPPRT 473
>tr|B6UE73|B6UE73_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 577
Score = 37.0 bits (84), Expect = 0.59 Identities = 25/76 (32%), Positives = 30/76 (39%), Gaps = 11/76 (14%) Frame = -2
Query: 220 GGTHKEGRCRSSFTPPQPPLMTLLVS-----SQTTGALTHLN------SASLTPADGSRA 74 GGTH SF PP PPL +LL Q TG + + + S+ P Sbjct: 453 GGTHPPAPAPGSFPPPPPPLPSLLPPLLQQFGQNTGGMIGMGGPFGMMAGSMPPPPPLSN 512
Query: 73 PLPLGFLHPRAPSSQP 26 LP GF P P P Sbjct: 513 ILPAGFPRPSGPPPPP 528
>tr|A4HBY3|A4HBY3_LEIBR Putative uncharacterized protein OS=Leishmania braziliensis GN=LbrM21_V2.1480 PE=4 SV=1 Length = 766
Score = 35.8 bits (81), Expect = 1.3 Identities = 26/76 (34%), Positives = 32/76 (42%), Gaps = 1/76 (1%) Frame = -2
Query: 238 LHPPTRGGTHKEGRCRSSFTPPQPPLMTLLVSSQTTG-ALTHLNSASLTPADGSRAPLPL 62 L PP R H++G + P PPL + L SS +T A S+S DG PL Sbjct: 188 LPPPLRTAPHQQGSAARAARDPTPPLSSALSSSSSTVIARGSAGSSSDPHRDGQHRLPPL 247
Query: 61 GFLHPRAPSSQPVGLP 14 L R P LP Sbjct: 248 PQLDSRTRHDAPPALP 263
>tr|Q10MF1|Q10MF1_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os03g19724 PE=4 SV=1 Length = 214
Score = 35.4 bits (80), Expect = 1.7 Identities = 26/72 (36%), Positives = 32/72 (44%), Gaps = 5/72 (6%) Frame = -2
Query: 232 PPTRGGTHKE---GRCRSSFTPPQPPL--MTLLVSSQTTGALTHLNSASLTPADGSRAPL 68 P RGG E R RS PP PP + LLV+++ GA H SA P+ R + Sbjct: 36 PARRGGVDAERGGARRRSRSAPPPPPSSSLRLLVATERGGARCHSRSAPPPPSSSLRLLV 95
Query: 67 PLGFLHPRAPSS 32 LH P S Sbjct: 96 AGAALHSSPPLS 107
>tr|Q8T5H0|Q8T5H0_ANOGA Putative differentiation regulator OS=Anopheles gambiae GN=22J3.8 PE=4 SV=1 Length = 1283
Score = 35.4 bits (80), Expect = 1.7 Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = -1
Query: 260 QKPISRPSPPAY-TGRHPQRREMQILLHSSSTPFDDSPRELPDNRGPHALELGFAYPCRR 84 ++P++ P+PP + Q+++ Q+L H SS+P + P++ P G P ++ Sbjct: 69 KRPVTSPAPPVLSSSAQQQQQQQQLLHHPSSSPHSNHLLGGPNHHLPPGASPGLVPPPQQ 128
Query: 83 QSRSAAP 63 Q + AP Sbjct: 129 QQQQQAP 135
>tr|Q7PUM7|Q7PUM7_ANOGA AGAP001608-PA (Fragment) OS=Anopheles gambiae GN=AGAP001608 PE=4 SV=3 Length = 537
Score = 35.4 bits (80), Expect = 1.7 Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = -1
Query: 260 QKPISRPSPPAY-TGRHPQRREMQILLHSSSTPFDDSPRELPDNRGPHALELGFAYPCRR 84 ++P++ P+PP + Q+++ Q+L H SS+P + P++ P G P ++ Sbjct: 69 KRPVTSPAPPVLSSSAQQQQQQQQLLHHPSSSPHSNHLLGGPNHHLPPGASPGLVPPPQQ 128
Query: 83 QSRSAAP 63 Q + AP Sbjct: 129 QQQQQAP 135
>tr|B1ZSN7|B1ZSN7_OPITP Thioredoxin OS=Opitutus terrae (strain DSM 11246 / PB90-1) GN=Oter_1452 PE=4 SV=1 Length = 272
Score = 35.0 bits (79), Expect = 2.2 Identities = 15/55 (27%), Positives = 27/55 (49%) Frame = -2
Query: 490 AHTPASHIWHSSRHLARGFSRSIHTTKPAKSNALASNIRYHHLESVHELLHNHFQ 326 +H PA H W + R + ++HT + LAS +R +L ++ +L F+ Sbjct: 166 SHLPAGHAWTDDAEIVRAITAALHTLQHDSDRLLASPLRDIYLVALRDLQSQRFR 220
>tr|B5GB32|B5GB32_9ACTO Oligopeptide/dipeptide ABC transporter OS=Streptomyces sp. SPB74 GN=SSBG_01490 PE=4 SV=1 Length = 474
Score = 34.3 bits (77), Expect = 3.8 Identities = 19/57 (33%), Positives = 24/57 (42%) Frame = -2
Query: 235 HPPTRGGTHKEGRCRSSFTPPQPPLMTLLVSSQTTGALTHLNSASLTPADGSRAPLP 65 H P RGG +E RCR+ PP+PPL T + + L G R P Sbjct: 167 HAPRRGG--RERRCRAGLRPPRPPLHPRPPRRDTPTGARRMTATPLLELRGLRKEFP 221
>tr|A0R658|A0R658_MYCS2 Putative uncharacterized protein OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=MSMEG_6433 PE=4 SV=1 Length = 368
Score = 33.9 bits (76), Expect = 5.0 Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 1/85 (1%) Frame = -1
Query: 260 QKPISRPSPPAYTGRHPQRREMQILLHSSSTPFDDSPRELPDNRG-PHALELGFAYPCRR 84 Q+P RP P +TG+ P + +H+ + PR P G H + G P ++ Sbjct: 62 QRPSPRPGGPGHTGQAPTHGHSRPPMHTGTRHPGKPPRPGPPRPGHGHPTKTGHPDPPQQ 121
Query: 83 QSRSAAPWISSPSRTQFATRWPPLP 9 S P S +R WP P Sbjct: 122 TDPSHTPTRPSHTRPTRPPGWPGWP 146
>tr|B0WGV7|B0WGV7_CULQU Putative uncharacterized protein OS=Culex quinquefasciatus GN=CpipJ_CPIJ006206 PE=4 SV=1 Length = 887
Score = 33.9 bits (76), Expect = 5.0 Identities = 24/73 (32%), Positives = 35/73 (47%) Frame = -2
Query: 241 HLHPPTRGGTHKEGRCRSSFTPPQPPLMTLLVSSQTTGALTHLNSASLTPADGSRAPLPL 62 +L PP+ H S + PPQPPL L+SS+ ++N +S + GS Sbjct: 719 YLIPPSSYHHH------SHYIPPQPPLQEKLLSSR-----KYINPSSYAISGGSTGTPSP 767
Query: 61 GFLHPRAPSSQPV 23 F + P+SQPV Sbjct: 768 EFPYQLTPNSQPV 780
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