BP916400
Clone id YMU001_000087_C07
Library
Length 530
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000087_C07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AAGAGCCAAAATTAGGCTTTTCTTTGTGTAGTAACCATACAATACAAATGTACAGAGGGC
GCAACACCCATTATATAGTAGTAGCCGAACTCTTTTTCTTCGGCAATGAATTTCCTTGAC
CTAAAATGCAGCAGAAGTGCAGGCAAAAATGAGTTCCCAACGGAACACTACCAACTTACC
ACAACATGCCCCGGGAAAAAATTGGGGTGAGGTGTATGTACAGGGCAGGAGATGGCAATA
ATTGAAGCTCTTCTGCCAAAAATATACTAATTAGTGAATCTTCTGTATGCTCTGCAACCC
TGCAGAAAAAAAAACCCTCTTTGAGCGGAGGGTCCCTGGCATCAATCATCTTTCTCGAAG
GGTTAGATACCTTGCACTGTTACTATGCTCTCTTTTTATCTTGTCCAATGTGCCCACACT
CATACCTCTTATGAAACCAGCACATTCAAAGCGAATCCCTGCTGACTGTTGCGGCACCCA
CAATCGGCCAATGACATGCTTCCCTAAGTTCTGCACTTGCTTCCTCACAG
■■Homology search results ■■ -
sp_hit_id Q4ADV7
Definition sp|Q4ADV7|RIC1_HUMAN Protein RIC1 homolog OS=Homo sapiens
Align length 51
Score (bit) 30.0
E-value 7.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916400|Adiantum capillus-veneris mRNA, clone:
YMU001_000087_C07.
(530 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q4ADV7|RIC1_HUMAN Protein RIC1 homolog OS=Homo sapiens GN=KIA... 30 7.2

>sp|Q4ADV7|RIC1_HUMAN Protein RIC1 homolog OS=Homo sapiens GN=KIAA1432
PE=1 SV=2
Length = 1423

Score = 30.0 bits (66), Expect = 7.2
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +2

Query: 59 AQHPLYSSSRTLFLRQ*ISLT*NAAEVQAKMSSQRNTTNLPQHAPGKNWGE 211
AQ P S F + ISL+ +A V A S + T ++P GK W +
Sbjct: 999 AQEPSSSGGFEFFRNRSISLSQSAENVPASKFSLQKTLSMPSGPSGKRWSK 1049


tr_hit_id A8S2C9
Definition tr|A8S2C9|A8S2C9_9CLOT Putative uncharacterized protein OS=Clostridium bolteae ATCC BAA-613
Align length 80
Score (bit) 38.1
E-value 0.28
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916400|Adiantum capillus-veneris mRNA, clone:
YMU001_000087_C07.
(530 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A8S2C9|A8S2C9_9CLOT Putative uncharacterized protein OS=Clost... 38 0.28

>tr|A8S2C9|A8S2C9_9CLOT Putative uncharacterized protein
OS=Clostridium bolteae ATCC BAA-613 GN=CLOBOL_06038 PE=4
SV=1
Length = 161

Score = 38.1 bits (87), Expect = 0.28
Identities = 23/80 (28%), Positives = 39/80 (48%)
Frame = -3

Query: 489 GRLWVPQQSAGIRFECAGFIRGMSVGTLDKIKREHSNSARYLTLRER*LMPGTLRSKRVF 310
GRLW+ + R++ G+ R + LD++ E+S+S YL++ E L + F
Sbjct: 77 GRLWLDRLLIDKRYQGKGYGRQAVLALLDRLHAEYSDSTVYLSVYENNTRAIRLYEQIGF 136

Query: 309 FSAGLQSIQKIH*LVYFWQK 250
G + H +VY W+K
Sbjct: 137 CFNGEYDTKGEHVMVYLWEK 156