BP916382
Clone id YMU001_000087_B01
Library
Length 545
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000087_B01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GTGGAGTGTTCTATGTAGAACCACAGCTTTTCTAGCTCGTTGTCATGGAGCACAAGCATA
GTGCGAACTTTAGTCGCCATATGCTCTATCTGCAGAGTCTCCAAAGTGCAAATATTGAGC
TCCATTCCAGAAGGTGCCTCCATGACTAATATATTTTTTAATGACAAATGCTTCAACCTT
GGGAAGAATGAAGGAAGAAGCATGAAGTTTATTGCACTCAATCCATCAGCAACCGTGTCA
AGGGTAAGCGACAGGAGACATGGAAATCCATTAACAACTGTATTCACTCTGGGTATGTAT
GCATGGTGCCACTCCAAATGCTCAAGCACGCTTGCACCACTGCCAAGTCTTTCTAGCAAG
TTTACATTTGGCACCAACGGGCTGGTAAGTGTGAATGACTTAAGCATATGCTTCACATGA
AGTAAACATGCCACCACCATACCAGCATGCATCTTGGACTCCATCCCATCACAGCGGATT
GATAATTCCTTCAAGCCTGTTGTGCGCATCACTGTTTCCACAATTATAAGCTCTCGCATA
CTCCA
■■Homology search results ■■ -
sp_hit_id Q9ZW88
Definition sp|Q9ZW88|FBL34_ARATH F-box/LRR-repeat protein At1g67190 OS=Arabidopsis thaliana
Align length 152
Score (bit) 66.2
E-value 1.0e-10
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916382|Adiantum capillus-veneris mRNA, clone:
YMU001_000087_B01.
(545 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9ZW88|FBL34_ARATH F-box/LRR-repeat protein At1g67190 OS=Arab... 66 1e-10
sp|Q6D961|YGFZ_ERWCT tRNA-modifying protein ygfZ OS=Erwinia caro... 31 4.4
sp|Q5PQV5|TPBG_RAT Trophoblast glycoprotein OS=Rattus norvegicus... 31 4.4
sp|Q95122|CD14_BOVIN Monocyte differentiation antigen CD14 OS=Bo... 31 4.4
sp|Q9VCU9|DCR1_DROME Endoribonuclease Dcr-1 OS=Drosophila melano... 30 5.8
sp|P47803|RGR_BOVIN RPE-retinal G protein-coupled receptor OS=Bo... 30 7.6

>sp|Q9ZW88|FBL34_ARATH F-box/LRR-repeat protein At1g67190
OS=Arabidopsis thaliana GN=At1g67190 PE=2 SV=1
Length = 419

Score = 66.2 bits (160), Expect = 1e-10
Identities = 51/152 (33%), Positives = 81/152 (53%), Gaps = 2/152 (1%)
Frame = -1

Query: 533 ELIIVETVMRTTGLKELSIRCDGMESKMHAGMVVACLLHVKHMLKSFTLTSPLVPNVNLL 354
E++I +T+ +T GL+ LSI D +K A V+A L++ + L+ + PNVN+L
Sbjct: 62 EILITQTIFQTMGLQGLSIMMDDA-NKFSAATVIAWLMYTRDTLRRLSYNVRTTPNVNIL 120

Query: 353 ERLGSGASVLEHLEWHHAYIPRVNTVVNGFPCLLSLTLDTVADGLSAINFMLLPSFFPRL 174
E G LE L H I V FPCL SL+L V+ +SA++ LL S P +
Sbjct: 121 EI--CGRQKLEALVLAHNSITGVEPSFQRFPCLKSLSLSYVS--ISALDLNLLLSACPMI 176

Query: 173 KHLSLKN--ILVMEAPSGMELNICTLETLQIE 84
+ L L + I + +A +EL+ TL+++ +
Sbjct: 177 ESLELVSLEIAMSDAQVTIELSSPTLKSVYFD 208


>sp|Q6D961|YGFZ_ERWCT tRNA-modifying protein ygfZ OS=Erwinia
carotovora subsp. atroseptica GN=ECA0758 PE=3 SV=1
Length = 333

Score = 30.8 bits (68), Expect = 4.4
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1

Query: 431 ACLLHVKHMLKSFTLTSPLVPNVNLLERLGSGASVLEHLEW 309
A LLH H + F L P+ +LLE+LG S+ + +W
Sbjct: 155 ATLLHFAHPAERFLLVLSPEPSASLLEQLGDKVSLNDSRQW 195


>sp|Q5PQV5|TPBG_RAT Trophoblast glycoprotein OS=Rattus norvegicus
GN=Tpbg PE=2 SV=1
Length = 426

Score = 30.8 bits (68), Expect = 4.4
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = -1

Query: 221 LSAINFMLLP----SFFPRLKHLSLKNILVMEAPSGMELNICTLETLQIEHMATKVRTML 54
L++ +F+ LP P LKHL L+N ++ N+ LE+L +E A K
Sbjct: 223 LASNHFLYLPRDLLDQLPSLKHLDLRNNSLVSLTYASFRNLTHLESLHLEDNALK----- 277

Query: 53 VLHDNELEKLWFYIEH 6
VLH++ L + W + H
Sbjct: 278 VLHNSTLAE-WQGLAH 292


>sp|Q95122|CD14_BOVIN Monocyte differentiation antigen CD14 OS=Bos
taurus GN=CD14 PE=2 SV=2
Length = 373

Score = 30.8 bits (68), Expect = 4.4
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = -1

Query: 359 LLERLGSGASVLEHLEWHHAYIPRVNTVVNGFPCLLSLTL-DTVADGLSAINFMLLPSFF 183
L + L G VL + H P ++ F L +L L D + G S + L P+ F
Sbjct: 163 LQQWLKPGLRVLNIAQAHSLAFPCAG--LSTFEALTTLDLSDNPSLGDSGLMAALCPNKF 220

Query: 182 PRLKHLSLKNILVMEAPSGM 123
P L++L+L+N ME PSG+
Sbjct: 221 PALQYLALRN-AGMETPSGV 239


>sp|Q9VCU9|DCR1_DROME Endoribonuclease Dcr-1 OS=Drosophila
melanogaster GN=Dcr-1 PE=1 SV=1
Length = 2249

Score = 30.4 bits (67), Expect = 5.8
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Frame = -1

Query: 419 HVKHMLKSFTLTSPLVPNVNLLER-----LGSGASVLEHLEWHHAYIPRVNTVVNGFPCL 255
H +H L +++ L+ +L E LGSG+ + +E + + P+V ++ C
Sbjct: 318 HERHYLLYCLVSTALIQLYSLCEHAFHRHLGSGSDSRQTIERYSS--PKVRRLLQTLRCF 375

Query: 254 LSLTLDTVADGLSAINFMLLPSFFPRLKH 168
+ T ADGL + + + F RL H
Sbjct: 376 KPEEVHTQADGLRRMRHQVDQADFNRLSH 404


>sp|P47803|RGR_BOVIN RPE-retinal G protein-coupled receptor OS=Bos
taurus GN=RGR PE=2 SV=1
Length = 291

Score = 30.0 bits (66), Expect = 7.6
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = -1

Query: 197 LPSFFPRLKHLSLKNILVMEAPSGMELNICTL 102
LP+ F L+ L++ +L++EA SG+ LNI T+
Sbjct: 7 LPTGFGELEVLAVGTVLLVEALSGLSLNILTI 38


tr_hit_id A5C1P7
Definition tr|A5C1P7|A5C1P7_VITVI Putative uncharacterized protein (Chromosome undetermined scaffold_87, whole genome shotgun sequence) OS=Vitis vinifera
Align length 158
Score (bit) 73.9
E-value 5.0e-12
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916382|Adiantum capillus-veneris mRNA, clone:
YMU001_000087_B01.
(545 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5C1P7|A5C1P7_VITVI Putative uncharacterized protein (Chromos... 74 5e-12
tr|Q8RZ32|Q8RZ32_ORYSJ cDNA clone:J013132O07, full insert sequen... 68 4e-10
tr|A2WX70|A2WX70_ORYSI Putative uncharacterized protein OS=Oryza... 68 4e-10
tr|A9TVZ3|A9TVZ3_PHYPA Predicted protein OS=Physcomitrella paten... 67 6e-10
tr|A5B2U2|A5B2U2_VITVI Putative uncharacterized protein OS=Vitis... 63 9e-09
tr|A7PPE7|A7PPE7_VITVI Chromosome chr8 scaffold_23, whole genome... 62 2e-08
tr|A8AFA5|A8AFA5_CITK8 Putative uncharacterized protein OS=Citro... 36 1.2
tr|A7R3E4|A7R3E4_VITVI Chromosome undetermined scaffold_512, who... 35 2.0
tr|A5BLU4|A5BLU4_VITVI Putative uncharacterized protein OS=Vitis... 35 2.6
tr|B8PLM3|B8PLM3_9APHY Predicted protein OS=Postia placenta Mad-... 35 3.4
tr|A3BTV9|A3BTV9_ORYSJ Putative uncharacterized protein OS=Oryza... 34 4.4
tr|B8BBC2|B8BBC2_ORYSI Putative uncharacterized protein OS=Oryza... 34 5.8
tr|Q945H0|Q945H0_HORVU NBS-LRR-like protein (Fragment) OS=Hordeu... 33 7.6
tr|A7QA35|A7QA35_VITVI Chromosome undetermined scaffold_69, whol... 33 7.6
tr|B8M6X0|B8M6X0_9EURO F-box domain protein OS=Talaromyces stipi... 33 7.6
tr|B3I6W4|B3I6W4_ECOLX PTS system, lactose/cellobiose family IIC... 33 9.9
tr|A2QZ70|A2QZ70_ASPNC Putative uncharacterized protein OS=Asper... 33 9.9

>tr|A5C1P7|A5C1P7_VITVI Putative uncharacterized protein (Chromosome
undetermined scaffold_87, whole genome shotgun sequence)
OS=Vitis vinifera GN=GSVIVT00037362001 PE=4 SV=1
Length = 419

Score = 73.9 bits (180), Expect = 5e-12
Identities = 54/158 (34%), Positives = 87/158 (55%), Gaps = 2/158 (1%)
Frame = -1

Query: 542 SMRELIIVETVMRTTGLKELSIRCDGMESKMHAGMVVACLLHVKHMLKSFTLTSPLVPNV 363
S E++I ET+ +TTGL+ LSI D ++ + A MV+A L++ + L+S PNV
Sbjct: 59 SQLEILITETIFQTTGLQGLSILMDEVD-EFSASMVIAWLMYTRETLRSLWYNVRTTPNV 117

Query: 362 NLLERLGSGASVLEHLEWHHAYIPRVNTVVNGFPCLLSLTLDTVADGLSAINFMLLPSFF 183
N+LE G LE L H I V F CL SL+L +V+ +SA++ LL +
Sbjct: 118 NILEI--CGRQKLETLFLAHNLIMGVEPNYQRFSCLKSLSLSSVS--ISALDMSLLLTAC 173

Query: 182 PRLKHLSLKN--ILVMEAPSGMELNICTLETLQIEHMA 75
P+++ L L N I + + +EL TL+++ +E ++
Sbjct: 174 PKIEILDLVNLEIAMSDTQVAVELRSPTLKSIYVEEIS 211


>tr|Q8RZ32|Q8RZ32_ORYSJ cDNA clone:J013132O07, full insert sequence
OS=Oryza sativa subsp. japonica GN=P0489B03.15 PE=2 SV=1
Length = 417

Score = 67.8 bits (164), Expect = 4e-10
Identities = 50/149 (33%), Positives = 81/149 (54%), Gaps = 2/149 (1%)
Frame = -1

Query: 533 ELIIVETVMRTTGLKELSIRCDGMESKMHAGMVVACLLHVKHMLKSFTLTSPLVPNVNLL 354
E++I +T+ +T GL+ LSI D + A V+A L++ + L+S + PNVN+L
Sbjct: 60 EIVITQTIFQTMGLQCLSIHIDRTH-EFSAAPVIAWLMYTRETLRSLSYNVRTNPNVNIL 118

Query: 353 ERLGSGASVLEHLEWHHAYIPRVNTVVNGFPCLLSLTLDTVADGLSAINFMLLPSFFPRL 174
E+ G LE L+ H I V F CL SL+L V+ +SA++ LL + P++
Sbjct: 119 EK--CGRQKLEVLDLDHNTITGVEPSYQRFTCLKSLSLRHVS--ISALDLSLLVAACPKI 174

Query: 173 KHLSLK--NILVMEAPSGMELNICTLETL 93
+ L+L ++ + S MEL TL++L
Sbjct: 175 ESLALDFLEVVTSDPQSTMELTSHTLKSL 203


>tr|A2WX70|A2WX70_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_04512 PE=4 SV=1
Length = 417

Score = 67.8 bits (164), Expect = 4e-10
Identities = 50/149 (33%), Positives = 81/149 (54%), Gaps = 2/149 (1%)
Frame = -1

Query: 533 ELIIVETVMRTTGLKELSIRCDGMESKMHAGMVVACLLHVKHMLKSFTLTSPLVPNVNLL 354
E++I +T+ +T GL+ LSI D + A V+A L++ + L+S + PNVN+L
Sbjct: 60 EIVITQTIFQTMGLQCLSIHIDRTH-EFSAAPVIAWLMYTRETLRSLSYNVRTNPNVNIL 118

Query: 353 ERLGSGASVLEHLEWHHAYIPRVNTVVNGFPCLLSLTLDTVADGLSAINFMLLPSFFPRL 174
E+ G LE L+ H I V F CL SL+L V+ +SA++ LL + P++
Sbjct: 119 EK--CGRQKLEVLDLDHNTITGVEPSYQRFTCLKSLSLRHVS--ISALDLSLLVAACPKI 174

Query: 173 KHLSLK--NILVMEAPSGMELNICTLETL 93
+ L+L ++ + S MEL TL++L
Sbjct: 175 ESLALDFLEVVTSDPQSTMELTSHTLKSL 203


>tr|A9TVZ3|A9TVZ3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_198811 PE=4 SV=1
Length = 421

Score = 67.0 bits (162), Expect = 6e-10
Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 2/172 (1%)
Frame = -1

Query: 533 ELIIVETVMRTTGLKELSIRCDGMESKMHAGMVVACLLHVKHMLKSFTLTSPLVPNVNLL 354
E++I +T+M+T+ L+ LSI G ++ A V+A L+ + L+ T P VN+L
Sbjct: 62 EVLITQTIMQTSCLQHLSIML-GNNNEFSAAPVIAWLMFTRESLRFLTYMMKTKPCVNVL 120

Query: 353 ERLGSGASVLEHLEWHHAYIPRVNTVVNGFPCLLSLTLDTVADGLSAINFMLLPSFFPRL 174
ER G + LE L H IP V+ V FP LL LTL V + +N +L S P+L
Sbjct: 121 ERCGK--TKLERLVLGHTLIPTVDPAVQRFPSLLHLTLSRVIVSSADLNALL--SACPKL 176

Query: 173 KHLSL--KNILVMEAPSGMELNICTLETLQIEHMATKVRTMLVLHDNELEKL 24
+ SL +I V + + + L +L T E + ++L + LE L
Sbjct: 177 EVFSLIETDINVSNSANTLRLTSSSLHTFYTEDLTL---DNVILEADHLETL 225


>tr|A5B2U2|A5B2U2_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_009884 PE=4 SV=1
Length = 421

Score = 63.2 bits (152), Expect = 9e-09
Identities = 48/155 (30%), Positives = 85/155 (54%), Gaps = 2/155 (1%)
Frame = -1

Query: 542 SMRELIIVETVMRTTGLKELSIRCDGMESKMHAGMVVACLLHVKHMLKSFTLTSPLVPNV 363
S E++I +T+ +T+GL+ LSI D ++ + A V+A L++ + L+ P++
Sbjct: 59 SRLEILITQTIFQTSGLEYLSICMDDVD-EFSAAPVIAWLMYTRETLRQLYYNVRTTPSI 117

Query: 362 NLLERLGSGASVLEHLEWHHAYIPRVNTVVNGFPCLLSLTLDTVADGLSAINFMLLPSFF 183
N+LE+ LE L+ I V FPCL SL+L V+ +SA++ LL +
Sbjct: 118 NILEK--CSRQKLEVLDLAQNSITGVEPSYQKFPCLKSLSLRYVS--ISALDLNLLLTAC 173

Query: 182 PRLKHLSLKN--ILVMEAPSGMELNICTLETLQIE 84
P+++ L+L N I + +A + MEL +L+ + +E
Sbjct: 174 PKIEVLALINLDIALSDATATMELASPSLKDIYVE 208


>tr|A7PPE7|A7PPE7_VITVI Chromosome chr8 scaffold_23, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00021624001
PE=4 SV=1
Length = 416

Score = 62.4 bits (150), Expect = 2e-08
Identities = 48/155 (30%), Positives = 85/155 (54%), Gaps = 2/155 (1%)
Frame = -1

Query: 542 SMRELIIVETVMRTTGLKELSIRCDGMESKMHAGMVVACLLHVKHMLKSFTLTSPLVPNV 363
S E++I +T+ +T+GL+ LSI D ++ + A V+A L++ + L+ P++
Sbjct: 59 SRLEILITQTIFQTSGLEYLSICMDDVD-EFSAAPVIAWLMYTRETLRQLYYNVRTTPSI 117

Query: 362 NLLERLGSGASVLEHLEWHHAYIPRVNTVVNGFPCLLSLTLDTVADGLSAINFMLLPSFF 183
N+LE+ LE L+ I V FPCL SL+L V+ +SA++ LL +
Sbjct: 118 NILEK--CSRQKLEVLDLAQNSITGVEPSYQKFPCLKSLSLRYVS--ISALDLNLLLTAC 173

Query: 182 PRLKHLSLKN--ILVMEAPSGMELNICTLETLQIE 84
P+++ L+L N I + +A + MEL +L+ + +E
Sbjct: 174 PKIEVLALINLDIALSDATATMELAGPSLKDIYVE 208


>tr|A8AFA5|A8AFA5_CITK8 Putative uncharacterized protein
OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83
/ SGSC4696) GN=CKO_01022 PE=4 SV=1
Length = 405

Score = 36.2 bits (82), Expect = 1.2
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Frame = -1

Query: 488 ELSIRCDGMESKMHAGMVVACLLHVKHMLKSFTLTSPLVPNVNLLERLGSGASVL---EH 318
E ++ G+ KM+ LL ++H+ K+ + L N L G S+L ++
Sbjct: 231 ETTVVAPGINGKMNEVQSAFGLLQLRHIDKALAERAALFDNYKTLLADIPGISLLIPPDN 290

Query: 317 LEWHHAYIPRVNTVVNGFPCLLSLTLDTVADGLSAINFMLLPSFFPRLKHLSLKNIL 147
+ W+HAY P + V + FP ++ D V D L + N M F+P + + L
Sbjct: 291 IAWNHAYCPIM--VSDAFP----VSRDGVYDLLKSHNIMPRRYFYPLISSFPMYRAL 341


>tr|A7R3E4|A7R3E4_VITVI Chromosome undetermined scaffold_512, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00013609001 PE=4 SV=1
Length = 1000

Score = 35.4 bits (80), Expect = 2.0
Identities = 27/81 (33%), Positives = 39/81 (48%)
Frame = -1

Query: 326 LEHLEWHHAYIPRVNTVVNGFPCLLSLTLDTVADGLSAINFMLLPSFFPRLKHLSLKNIL 147
L++LE + + + + N L SLT D V I L S P L LS+K
Sbjct: 687 LQYLEVNGCF--NLEKLPNALHALTSLT-DLVIWNCPKIVSFLETSLLPMLTRLSMKICE 743

Query: 146 VMEAPSGMELNICTLETLQIE 84
+E P GM +N C +E L+I+
Sbjct: 744 GLELPDGMMINRCAIEYLEIK 764


>tr|A5BLU4|A5BLU4_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_008938 PE=4 SV=1
Length = 1117

Score = 35.0 bits (79), Expect = 2.6
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = -1

Query: 314 EWHHAYIPRVNTVVNG-FPCLLSLTLDTVADGLSAINFMLLPSFFPRLKHLSLKNILVME 138
EW P V V G FPCLL LT+ + LPS P L L + N ++
Sbjct: 606 EWEDWSFPNVVEDVEGLFPCLLELTIQNYPKLIGK-----LPSLLPSLLELRISNCPALK 660

Query: 137 APSGMELNICTL 102
P +++C L
Sbjct: 661 VPLPRLVSVCGL 672


>tr|B8PLM3|B8PLM3_9APHY Predicted protein OS=Postia placenta
Mad-698-R GN=POSPLDRAFT_104384 PE=4 SV=1
Length = 395

Score = 34.7 bits (78), Expect = 3.4
Identities = 35/158 (22%), Positives = 61/158 (38%), Gaps = 2/158 (1%)
Frame = -1

Query: 542 SMRELIIVETVMRTTGLKELSIRCDGMESKMHAGMVVACLLHVKHMLKSFTLTSPLVPNV 363
S + I+ + R L++L+I C H H F+ S + +
Sbjct: 121 SFCQFILADLQNRLPYLRQLTIECTSFGVARHIEF---------HKTVDFSAASDIAELL 171

Query: 362 NLLERLGSGASVLEHLEWHHAYIPRVNTVVNGFPCLLSLTLDTVADGLSAINFMLLPSFF 183
+RL + E AY PR+ V G P L L L + +LPS
Sbjct: 172 EKAKRLNRLSVAC--FEGLIAYEPRIGIAVCGIPDLADLALHNCGH----LTVAMLPSLR 225

Query: 182 PRLKHLSLKNILVMEAPSGME--LNICTLETLQIEHMA 75
R + L+ ++ PS + + ++ETL++ H++
Sbjct: 226 SRPRRLAFTSLFNRSLPSFFHRLIAVDSIETLELSHLS 263