BP916318 |
Clone id |
YMU001_000086_C11 |
Library |
YMU01 |
Length |
484 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000086_C11. |
Accession |
BP916318 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1058Contig1 |
Sequence |
GCGGATCCCATGACTCTGCAAGAGTCTGCATCTGTGTATCTGTTTTGTGGTAACGAGGGT CCGTAGCTTGGTGGTGAAGATGTCTTGTGATTCTGTTGGTATGTATGTAGCAATCTCGTT TGTAACTCGGCACAAATCTTCGTTAGAGATCCACAGTATGACATGTGCATGCAGTGAGCC TCGATTTTGCACTTCGTAGCGGACCATGTGATGCTCTACATGGCCAATTATGTTGCTTCC ATTGATGATGTATTTATTCAAGAAAGCGTGCAAGCGAAGGTGAAACAGTGTTGCACACTC TATAGGGCAATCGTTCCACTTGAAGTCTTGGTTGTAGCCTTGAGCAAGTTTTTCAATTGT GATGACTTCTTGCCATCTTGTATGGGAAACCTCATCAGCAGTGAATGTCAAGAACAGATG TGGTAGTCCCCATGTGTGTACCATTGTTATGAGGTCTCTCAAGTTTCGTCGATGCCATGG TGGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P29924 |
Definition |
sp|P29924|NQO12_PARDE NADH-quinone oxidoreductase chain 12 OS=Paracoccus denitrificans |
Align length |
47 |
Score (bit) |
30.8 |
E-value |
3.4 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q7M562 |
Definition |
tr|Q7M562|Q7M562_DANRE Replicase/helicase/endonuclease OS=Danio rerio |
Align length |
170 |
Score (bit) |
73.9 |
E-value |
4.0e-12 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916318|Adiantum capillus-veneris mRNA, clone: YMU001_000086_C11. (484 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q7M562|Q7M562_DANRE Replicase/helicase/endonuclease OS=Danio ... 74 4e-12 tr|Q7M561|Q7M561_DANRE Replicase/helicase/endonuclease OS=Danio ... 74 4e-12 tr|Q7M560|Q7M560_DANRE Replicase/helicase/endonuclease OS=Danio ... 68 3e-10 tr|A8J372|A8J372_CHLRE Predicted protein (Fragment) OS=Chlamydom... 66 7e-10 tr|Q7M559|Q7M559_DANRE Replicase/helicase/endonuclease OS=Danio ... 64 4e-09 tr|Q7M558|Q7M558_DANRE Replicase/helicase/endonuclease OS=Danio ... 64 4e-09 tr|Q38JW4|Q38JW4_XIPMA Hel OS=Xiphophorus maculatus GN=Hel PE=4 ... 58 3e-07 tr|Q6ATF7|Q6ATF7_ORYSJ Putative uncharacterized protein OSJNBb00... 56 1e-06 tr|B0XHK1|B0XHK1_CULQU Putative uncharacterized protein OS=Culex... 54 4e-06 tr|B0X370|B0X370_CULQU Putative uncharacterized protein OS=Culex... 54 4e-06 tr|B0X2H4|B0X2H4_CULQU Putative uncharacterized protein OS=Culex... 54 4e-06 tr|B0WS82|B0WS82_CULQU Putative uncharacterized protein OS=Culex... 54 4e-06 tr|B0WHR0|B0WHR0_CULQU Putative uncharacterized protein OS=Culex... 54 4e-06 tr|B0WBF3|B0WBF3_CULQU Putative uncharacterized protein OS=Culex... 54 4e-06 tr|Q9N4X4|Q9N4X4_CAEEL Putative uncharacterized protein Y46B2A.2... 53 7e-06 tr|O44843|O44843_CAEEL Putative uncharacterized protein OS=Caeno... 53 7e-06 tr|O17306|O17306_CAEEL Putative uncharacterized protein (Putativ... 53 7e-06 tr|Q9N5Q7|Q9N5Q7_CAEEL Putative uncharacterized protein OS=Caeno... 52 1e-05 tr|Q5VR06|Q5VR06_ORYSJ Helicase-like protein OS=Oryza sativa sub... 52 1e-05 tr|Q0JNT8|Q0JNT8_ORYSJ Os01g0266200 protein (Fragment) OS=Oryza ... 52 2e-05 tr|B8MM48|B8MM48_9EURO Putative uncharacterized protein OS=Talar... 51 2e-05 tr|Q2QP79|Q2QP79_ORYSJ AT hook motif-containing protein, putativ... 50 7e-05 tr|Q6R2R8|Q6R2R8_9VIRU Putative uncharacterized protein OS=Hypos... 49 9e-05 tr|Q9M3G4|Q9M3G4_ARATH Putative uncharacterized protein T14K23_3... 49 9e-05 tr|Q2A9E0|Q2A9E0_BRAOL Putative uncharacterized protein OS=Brass... 49 9e-05 tr|Q53R78|Q53R78_ORYSJ Putative uncharacterized protein OS=Oryza... 49 2e-04 tr|Q2R017|Q2R017_ORYSJ Helicase, putative OS=Oryza sativa subsp.... 49 2e-04 tr|A2Q378|A2Q378_MEDTR Putative uncharacterized protein OS=Medic... 48 2e-04 tr|B0XLK1|B0XLK1_CULQU Putative uncharacterized protein OS=Culex... 48 2e-04 tr|B0XKN7|B0XKN7_CULQU Putative uncharacterized protein OS=Culex... 48 2e-04
>tr|Q7M562|Q7M562_DANRE Replicase/helicase/endonuclease OS=Danio rerio GN=hel_dr1 PE=4 SV=1 Length = 2289
Score = 73.9 bits (180), Expect = 4e-12 Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 20/170 (11%) Frame = -2
Query: 483 PPWHRRNLRDLITMVHTWGLPHLFLTFTADEVSHTRWQEVITIEKLAQGYNQDFKWNDCP 304 P + + LRDL M+ G P F TF+A E+ RW E++T+ K QG DF D Sbjct: 942 PAYWEKTLRDLQAMIRQLGTPTFFCTFSAAEM---RWPEIVTVIKAQQGEEIDFSQLDWA 998
Query: 303 IECATL----------FHLRLHAFLNKYIINGSNIIGHVEHHMVRYEVQNRGSLHAHVIL 154 +C L F R+ A + +++ + IG VE R E Q RGS H H++ Sbjct: 999 TKCEILRSNPVTVMRMFEKRVDALMAHLLLSPAQPIGEVEDFFYRVEFQARGSPHIHLLA 1058
Query: 153 WI---------SNEDLCR-VTNEIATYIPTESQDIFTTKLRTLVTTKQIH 34 W+ ++E +C + ++ +P + D +L +VT Q+H Sbjct: 1059 WVKDAPDPEEDNDETICDFIDRYVSCKLPDPNVD---PELHKIVTEVQLH 1105
>tr|Q7M561|Q7M561_DANRE Replicase/helicase/endonuclease OS=Danio rerio GN=hel_dr2 PE=4 SV=1 Length = 2181
Score = 73.9 bits (180), Expect = 4e-12 Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 20/170 (11%) Frame = -2
Query: 483 PPWHRRNLRDLITMVHTWGLPHLFLTFTADEVSHTRWQEVITIEKLAQGYNQDFKWNDCP 304 P + + LRDL M+ G P F TF+A E+ RW E++T+ K QG DF D Sbjct: 834 PAYWEKTLRDLQAMIRQLGTPTFFCTFSAAEM---RWPEIVTVIKAQQGEEIDFSQLDWA 890
Query: 303 IECATL----------FHLRLHAFLNKYIINGSNIIGHVEHHMVRYEVQNRGSLHAHVIL 154 +C L F R+ A + +++ + IG VE R E Q RGS H H++ Sbjct: 891 TKCEILRSNPVTVMRMFEKRVDALMAHLLLSPAQPIGEVEDFFYRVEFQARGSPHIHLLA 950
Query: 153 WI---------SNEDLCR-VTNEIATYIPTESQDIFTTKLRTLVTTKQIH 34 W+ ++E +C + ++ +P + D +L +VT Q+H Sbjct: 951 WVKDAPDPEEDNDETICDFIDRYVSCKLPDPNVD---PELHKIVTEVQLH 997
>tr|Q7M560|Q7M560_DANRE Replicase/helicase/endonuclease OS=Danio rerio GN=hel_dr3 PE=4 SV=1 Length = 2353
Score = 67.8 bits (164), Expect = 3e-10 Identities = 50/170 (29%), Positives = 77/170 (45%), Gaps = 20/170 (11%) Frame = -2
Query: 483 PPWHRRNLRDLITMVHTWGLPHLFLTFTADEVSHTRWQEVITIEKLAQGYNQDFKWNDCP 304 P + + LRDL M+ G P F TF+A E+ RW EVIT K Q +F D Sbjct: 1012 PAYWEKTLRDLFAMLRQLGTPTFFCTFSAAEM---RWPEVITAIKAQQCETVNFSELDWS 1068
Query: 303 IECATL----------FHLRLHAFLNKYIINGSNIIGHVEHHMVRYEVQNRGSLHAHVIL 154 ++C L F R+ A + I++ + IG V R E Q RGS H H + Sbjct: 1069 VKCEILRSNPVTAMRMFEKRVEALMRDLIMSPAQPIGEVIDFFYRVEFQQRGSPHIHCLF 1128
Query: 153 WI---------SNEDLCR-VTNEIATYIPTESQDIFTTKLRTLVTTKQIH 34 W+ ++ +C + I+ +P ++D ++L +VT Q+H Sbjct: 1129 WVKDAPEFETDQDQVVCDFIDKYISCKLPDPNRD---SELHKIVTEVQMH 1175
>tr|A8J372|A8J372_CHLRE Predicted protein (Fragment) OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_149921 PE=4 SV=1 Length = 599
Score = 66.2 bits (160), Expect = 7e-10 Identities = 28/48 (58%), Positives = 36/48 (75%) Frame = -2
Query: 483 PPWHRRNLRDLITMVHTWGLPHLFLTFTADEVSHTRWQEVITIEKLAQ 340 P WHRRNL+DL+ +V WGLP FLT TADE S +RW+EV T+E + + Sbjct: 551 PSWHRRNLQDLLALVDRWGLPTHFLTLTADEFSTSRWEEVETLEDMVR 598
>tr|Q7M559|Q7M559_DANRE Replicase/helicase/endonuclease OS=Danio rerio GN=hel_dr4 PE=4 SV=1 Length = 2783
Score = 63.9 bits (154), Expect = 4e-09 Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 10/124 (8%) Frame = -2
Query: 483 PPWHRRNLRDLITMVHTWGLPHLFLTFTADEVSHTRWQEVITIEKLAQGYNQDF---KWN 313 P + + LRDL M+ G P F TF+A E+ RW EVIT K Q +F W+ Sbjct: 1445 PAYWEKTLRDLFAMLRQLGTPTFFCTFSAAEM---RWPEVITAIKTQQRETVNFCDLDWS 1501
Query: 312 D-C------PIECATLFHLRLHAFLNKYIINGSNIIGHVEHHMVRYEVQNRGSLHAHVIL 154 + C P+ +F R+ A + I++ + IG V R E Q RGS H H + Sbjct: 1502 EKCEILRSNPVTAMRMFEKRVEALMRDLIMSPAQPIGEVIDFFYRVEFQLRGSPHIHCLF 1561
Query: 153 WISN 142 W+ + Sbjct: 1562 WVKD 1565
>tr|Q7M558|Q7M558_DANRE Replicase/helicase/endonuclease OS=Danio rerio GN=hel_dr5 PE=4 SV=1 Length = 3007
Score = 63.9 bits (154), Expect = 4e-09 Identities = 37/124 (29%), Positives = 62/124 (50%), Gaps = 10/124 (8%) Frame = -2
Query: 483 PPWHRRNLRDLITMVHTWGLPHLFLTFTADEVSHTRWQEVITIEKLAQGYNQ---DFKWN 313 P + + RDL+ V G+P F +F++ ++ RW ++ +G Q + +W Sbjct: 1653 PAFWQTAQRDLLACVRQLGIPTWFCSFSSADM---RWNNLLYSILKQEGRTQTLEELQWA 1709
Query: 312 D-C------PIECATLFHLRLHAFLNKYIINGSNIIGHVEHHMVRYEVQNRGSLHAHVIL 154 D C P+ A +F R H FL + +++ S+ IG ++ + R E Q RGS H H + Sbjct: 1710 DRCELLRRNPVTAARMFDFRWHCFLREVLMSASHPIGKIKDYFYRVEFQQRGSPHVHCLF 1769
Query: 153 WISN 142 WI N Sbjct: 1770 WIEN 1773
>tr|Q38JW4|Q38JW4_XIPMA Hel OS=Xiphophorus maculatus GN=Hel PE=4 SV=1 Length = 2816
Score = 57.8 bits (138), Expect = 3e-07 Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 20/173 (11%) Frame = -2
Query: 483 PPWHRRNLRDLITMVHTWGLPHLFLTFTADEVSHTRWQEVITIEKLAQGYNQ---DFKWN 313 P + + RDL+ V G P F +F++ ++ RW ++ +G Q +W Sbjct: 1484 PAFWQTAQRDLLACVRMLGKPTWFASFSSADM---RWTNLLYSILKQEGRTQTLEQLQWA 1540
Query: 312 D-C------PIECATLFHLRLHAFLNKYIINGSNIIGHVEHHMVRYEVQNRGSLHAHVIL 154 + C P+ A +F R H F+ + +++ ++ IG +E + R E Q RGS H H + Sbjct: 1541 EKCELLRRNPVTAARMFDFRWHVFVREVLMSPAHPIGKIEDYYYRVEFQQRGSPHCHCLF 1600
Query: 153 WIS----------NEDLCRVTNEIATYIPTESQDIFTTKLRTLVTTKQIHRCR 25 WIS E + + + IP+E L +VT+ Q H R Sbjct: 1601 WISGAPILDKNTDEEVIAFIDKYVTCEIPSEED-----ALSEVVTSVQQHSKR 1648
>tr|Q6ATF7|Q6ATF7_ORYSJ Putative uncharacterized protein OSJNBb0061M13.15 OS=Oryza sativa subsp. japonica GN=OSJNBb0061M13.15 PE=4 SV=1 Length = 1396
Score = 55.8 bits (133), Expect = 1e-06 Identities = 33/115 (28%), Positives = 58/115 (50%) Frame = -2
Query: 483 PPWHRRNLRDLITMVHTWGLPHLFLTFTADEVSHTRWQEVITIEKLAQGYNQDFKWNDCP 304 P ++ +N +D + + +G PHLF+TFT + + W E+ +E LA Q +D P Sbjct: 581 PRYYYQNYQDCVALCRRFGCPHLFITFTCNAL----WLEI--VEALAPISGQ--YSSDRP 632
Query: 303 IECATLFHLRLHAFLNKYIINGSNIIGHVEHHMVRYEVQNRGSLHAHVILWISNE 139 +FH++L F++ + N G + + E Q RG H H+I+W+ + Sbjct: 633 DIVDRVFHMKLRIFMDDIVKN--QFFGPISGVVYTIEFQKRGLPHVHIIVWLKRD 685
>tr|B0XHK1|B0XHK1_CULQU Putative uncharacterized protein OS=Culex quinquefasciatus GN=CpipJ_CPIJ018812 PE=4 SV=1 Length = 878
Score = 53.9 bits (128), Expect = 4e-06 Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 27/177 (15%) Frame = -2
Query: 477 WHRRNLRDLITMVHTWGLPHLFLTFTADEVSHTRWQEVITI-EKLAQGYNQ--------- 328 W R +DL M+ G P +FLT +A+E T W E++ I KL+ N+ Sbjct: 606 WQIRE-KDLFAMIRQLGKPTVFLTMSANE---THWPELLKILYKLSDQENRIDLTEPMEQ 661
Query: 327 ------DFKWNDCPIECATLFHLRLHAFLNKYIINGSNIIG-----HVEHHMVRYEVQNR 181 ++ P+ C F+ + L +I GS +V + R E Q+R Sbjct: 662 LTALQRAVLVSEDPVTCCLYFNKLIEVIL---LILGSKTHSPFGKYYVVDYFKRIEFQHR 718
Query: 180 GSLHAHVILWISNEDLCRVTNEIATYIPTESQDIFT-TKLR-----TLVTTKQIHRC 28 GS H H +LW++N+ + ++P + I T T +R T TKQ+HRC Sbjct: 719 GSPHCHAVLWLANDP----KEPASEHMPATLELINTITSIRFEDLPTQTATKQVHRC 771
>tr|B0X370|B0X370_CULQU Putative uncharacterized protein OS=Culex quinquefasciatus GN=CpipJ_CPIJ013181 PE=4 SV=1 Length = 1956
Score = 53.9 bits (128), Expect = 4e-06 Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 27/177 (15%) Frame = -2
Query: 477 WHRRNLRDLITMVHTWGLPHLFLTFTADEVSHTRWQEVITI-EKLAQGYNQ--------- 328 W R +DL M+ G P +FLT +A+E T W E++ I KL+ N+ Sbjct: 646 WQIRE-KDLFAMIRQLGKPTVFLTMSANE---THWPELLKILYKLSDQENRIDLTEPMEQ 701
Query: 327 ------DFKWNDCPIECATLFHLRLHAFLNKYIINGSNIIG-----HVEHHMVRYEVQNR 181 ++ P+ C F+ + L +I GS +V + R E Q+R Sbjct: 702 LTALQRAVLVSEDPVTCCLYFNKLIEVIL---LILGSKTHSPFGKYYVVDYFKRIEFQHR 758
Query: 180 GSLHAHVILWISNEDLCRVTNEIATYIPTESQDIFT-TKLR-----TLVTTKQIHRC 28 GS H H +LW++N+ + ++P + I T T +R T TKQ+HRC Sbjct: 759 GSPHCHAVLWLANDP----KEPASEHMPATLELINTITSIRFEDLPTQTATKQVHRC 811
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