BP916313
Clone id YMU001_000086_C06
Library
Length 415
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000086_C06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AGGAAAAAATAGAACATTTTAGCATCACGTGTAGTGCCTTGCCACCTTCTTACTGTAAGG
GGAGACCACTTAAGGTGGCTTATGGGGCTGGCAACATACTATCCATACAAAAATCCTACC
TCCTGACGGTAAGACGAAAAGGGCACCTCGTCTTTGTAGTATGTCGCATATATCATGGCT
AGAAAGTCCAGGCATATGCAGTGAGTGCTTAGTCATCCGATAACCACTACATGCCTGATG
GTAGTATTCTGTCATTCCACCTCTAATCAATAGACCAACTAGTGCTGACACCTTTGTCAT
TTCCACTCATCTGGAGGCAGCACAGGCAAAGGCTCCGGAAGCAAAGTGTTCACTCTATCA
TGGGATTTGCATGACTTGTATCGATTGTAGCATATCTGATACAGCGATTACCAAA
■■Homology search results ■■ -
sp_hit_id Q43117
Definition sp|Q43117|KPYA_RICCO Pyruvate kinase isozyme A, chloroplastic OS=Ricinus communis
Align length 18
Score (bit) 33.9
E-value 0.26
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916313|Adiantum capillus-veneris mRNA, clone:
YMU001_000086_C06.
(415 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q43117|KPYA_RICCO Pyruvate kinase isozyme A, chloroplastic OS... 34 0.26
sp|Q40545|KPYA_TOBAC Pyruvate kinase isozyme A, chloroplastic OS... 33 0.34
sp|Q8FNU0|MURG_COREF UDP-N-acetylglucosamine--N-acetylmuramyl-(p... 31 2.2
sp|Q2GIN1|SYY_ANAPZ Tyrosyl-tRNA synthetase OS=Anaplasma phagocy... 30 2.9
sp|Q23651|ELP3_CAEEL Probable elongator complex protein 3 OS=Cae... 29 6.5
sp|Q60LW7|ELP3_CAEBR Probable elongator complex protein 3 OS=Cae... 29 6.5
sp|Q14EB0|SPIKE_CVHN2 Spike glycoprotein OS=Human coronavirus HK... 29 8.4
sp|O75165|DJC13_HUMAN DnaJ homolog subfamily C member 13 OS=Homo... 29 8.4

>sp|Q43117|KPYA_RICCO Pyruvate kinase isozyme A, chloroplastic
OS=Ricinus communis PE=1 SV=1
Length = 583

Score = 33.9 bits (76), Expect = 0.26
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -2

Query: 414 LVIAVSDMLQSIQVMQIP 361
LVIAVSDMLQSIQVM +P
Sbjct: 566 LVIAVSDMLQSIQVMNVP 583


>sp|Q40545|KPYA_TOBAC Pyruvate kinase isozyme A, chloroplastic
OS=Nicotiana tabacum PE=2 SV=1
Length = 593

Score = 33.5 bits (75), Expect = 0.34
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = -2

Query: 414 LVIAVSDMLQSIQVMQIP 361
L+IAVSDMLQSIQVM +P
Sbjct: 576 LIIAVSDMLQSIQVMNVP 593


>sp|Q8FNU0|MURG_COREF
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Corynebacterium efficiens GN=murG PE=3
SV=1
Length = 360

Score = 30.8 bits (68), Expect = 2.2
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = +3

Query: 279 LVLTPLSFPLIWRQHRQRLRKQSVHSIMGFA*LVSIVAYLIQR 407
LV P RQ RQ LR H+++GF VS AYL R
Sbjct: 76 LVKLPFRVAKSLRQARQVLRDTGAHAVVGFGGYVSAPAYLAAR 118


>sp|Q2GIN1|SYY_ANAPZ Tyrosyl-tRNA synthetase OS=Anaplasma
phagocytophilum (strain HZ) GN=tyrS PE=3 SV=1
Length = 412

Score = 30.4 bits (67), Expect = 2.9
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = -2

Query: 333 AFACAASR*VEMTKVSALVGLLIRGGMTEYYHQACSGYRMTKHSLHMPGLSSHDICDILQ 154
A CA ++T +AL G++ G +T Y G+ T +SLH+ L + LQ
Sbjct: 9 ATLCARGYLHQLTDATALDGIMSSGAVTAYI-----GFDCTANSLHIGSLMQIMLLRYLQ 63

Query: 153 RRGALFVLPSGG 118
R G ++ GG
Sbjct: 64 RFGHKPIVLLGG 75


>sp|Q23651|ELP3_CAEEL Probable elongator complex protein 3
OS=Caenorhabditis elegans GN=elpc-3 PE=2 SV=2
Length = 547

Score = 29.3 bits (64), Expect = 6.5
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Frame = +3

Query: 45 PSYCKGRPLK--VAYGAGNI-LSIQKSYLLTVR--RKGHLVFVVCRIYHG*KVQAYAVSA 209
P YC R L + YG + + +Q +Y R +GH V VC +H K Y V
Sbjct: 220 PDYCLPRHLNDMLLYGCTRLEIGVQSTYEDVARDTNRGHTVKSVCETFHMAKDTGYKVVI 279

Query: 210 *SSDNHYMPD 239
H MPD
Sbjct: 280 -----HMMPD 284


>sp|Q60LW7|ELP3_CAEBR Probable elongator complex protein 3
OS=Caenorhabditis briggsae GN=elpc-3 PE=3 SV=1
Length = 548

Score = 29.3 bits (64), Expect = 6.5
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Frame = +3

Query: 45 PSYCKGRPLK--VAYGAGNI-LSIQKSYLLTVR--RKGHLVFVVCRIYHG*KVQAYAVSA 209
P YC R L + YG + + +Q +Y R +GH V VC +H K Y V
Sbjct: 220 PDYCLPRHLNDMLLYGCTRLEIGVQSTYEDVARDTNRGHTVKSVCETFHMAKDTGYKVVI 279

Query: 210 *SSDNHYMPD 239
H MPD
Sbjct: 280 -----HMMPD 284


>sp|Q14EB0|SPIKE_CVHN2 Spike glycoprotein OS=Human coronavirus HKU1
(isolate N2) GN=S PE=3 SV=1
Length = 1351

Score = 28.9 bits (63), Expect = 8.4
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = -3

Query: 173 IYATYYKDEVPFSSYRQEVG----FLYG*YVASPISHLKWSPLTVRRWQGTTRDAKMFYF 6
+Y +Y++ F +Y +VG FL+ Y+ + +SH PLT + T + + Y+
Sbjct: 198 LYFHFYQERGVFYAYYADVGMPTTFLFSLYLGTILSHYYVMPLTCKAISSNTDNETLEYW 257


>sp|O75165|DJC13_HUMAN DnaJ homolog subfamily C member 13 OS=Homo
sapiens GN=DNAJC13 PE=1 SV=4
Length = 2243

Score = 28.9 bits (63), Expect = 8.4
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3

Query: 200 CICLDFLAMIYATYYKDEVPFSSYRQEVGFL 108
C+CL LA++Y +++ PF+ R +G L
Sbjct: 871 CLCLQALAIVYGRCHEEIGPFTDTRYIIGML 901


tr_hit_id B2VTF5
Definition tr|B2VTF5|B2VTF5_PYRTR Predicted protein OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP)
Align length 58
Score (bit) 34.7
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916313|Adiantum capillus-veneris mRNA, clone:
YMU001_000086_C06.
(415 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B2VTF5|B2VTF5_PYRTR Predicted protein OS=Pyrenophora tritici-... 35 2.4
tr|B7RGC5|B7RGC5_9RHOB Leucyl/phenylalanyl-tRNA--protein transfe... 34 4.1
tr|Q9LIK0|Q9LIK0_ARATH Pyruvate kinase OS=Arabidopsis thaliana G... 34 4.1
tr|Q93ZY0|Q93ZY0_ARATH Pyruvate kinase (Fragment) OS=Arabidopsis... 34 4.1
tr|Q8LEY6|Q8LEY6_ARATH Pyruvate kinase OS=Arabidopsis thaliana P... 34 4.1
tr|A7NWY0|A7NWY0_VITVI Pyruvate kinase OS=Vitis vinifera GN=GSVI... 34 4.1
tr|Q6ZLB7|Q6ZLB7_ORYSJ Pyruvate kinase OS=Oryza sativa subsp. ja... 33 9.2
tr|Q69WE5|Q69WE5_ORYSJ Pyruvate kinase OS=Oryza sativa subsp. ja... 33 9.2
tr|Q0D867|Q0D867_ORYSJ Pyruvate kinase (Fragment) OS=Oryza sativ... 33 9.2
tr|B8B7Z2|B8B7Z2_ORYSI Putative uncharacterized protein OS=Oryza... 33 9.2
tr|B7ZXH0|B7ZXH0_MAIZE Putative uncharacterized protein OS=Zea m... 33 9.2
tr|B4FEC3|B4FEC3_MAIZE Putative uncharacterized protein OS=Zea m... 33 9.2
tr|B4FC22|B4FC22_MAIZE Putative uncharacterized protein OS=Zea m... 33 9.2
tr|A3BH68|A3BH68_ORYSJ Pyruvate kinase OS=Oryza sativa subsp. ja... 33 9.2

>tr|B2VTF5|B2VTF5_PYRTR Predicted protein OS=Pyrenophora
tritici-repentis (strain Pt-1C-BFP) GN=PTRG_01919 PE=4
SV=1
Length = 192

Score = 34.7 bits (78), Expect = 2.4
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 9/58 (15%)
Frame = -1

Query: 415 FGNRCIR--YATIDTSHANPMIE*TLCFRSLCLCCLQMSGNDK-------GVSTSWSI 269
F C+ + +NP++E LC RSL L CLQ ND V T WS+
Sbjct: 84 FQGECVHDMHTYFQQQDSNPLVEIHLCVRSLLLLCLQDINNDNELKGTITNVVTKWSV 141


>tr|B7RGC5|B7RGC5_9RHOB Leucyl/phenylalanyl-tRNA--protein
transferase OS=Roseobacter sp. GAI101 GN=aat PE=4 SV=1
Length = 211

Score = 33.9 bits (76), Expect = 4.1
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = -2

Query: 291 VSALVGLLIRGGMTEYYHQACSGYRMTKHSLHMPGLSSHDICDILQRRGALFVLPS 124
++ LV L RGG T + Q + + + ++ +P + HD+ D Q+R A FV P+
Sbjct: 141 LACLVDRLRRGGFTLFDTQFLTEHLASLGAIEVPRAAYHDLLDDAQQRSASFVAPA 196


>tr|Q9LIK0|Q9LIK0_ARATH Pyruvate kinase OS=Arabidopsis thaliana
GN=At3g22960 PE=2 SV=1
Length = 596

Score = 33.9 bits (76), Expect = 4.1
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -2

Query: 414 LVIAVSDMLQSIQVMQIP 361
LVIAVSDMLQSIQVM +P
Sbjct: 579 LVIAVSDMLQSIQVMNVP 596


>tr|Q93ZY0|Q93ZY0_ARATH Pyruvate kinase (Fragment) OS=Arabidopsis
thaliana GN=At3g22960 PE=2 SV=2
Length = 324

Score = 33.9 bits (76), Expect = 4.1
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -2

Query: 414 LVIAVSDMLQSIQVMQIP 361
LVIAVSDMLQSIQVM +P
Sbjct: 307 LVIAVSDMLQSIQVMNVP 324


>tr|Q8LEY6|Q8LEY6_ARATH Pyruvate kinase OS=Arabidopsis thaliana PE=2
SV=1
Length = 596

Score = 33.9 bits (76), Expect = 4.1
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -2

Query: 414 LVIAVSDMLQSIQVMQIP 361
LVIAVSDMLQSIQVM +P
Sbjct: 579 LVIAVSDMLQSIQVMNVP 596


>tr|A7NWY0|A7NWY0_VITVI Pyruvate kinase OS=Vitis vinifera
GN=GSVIVT00020102001 PE=3 SV=1
Length = 586

Score = 33.9 bits (76), Expect = 4.1
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -2

Query: 414 LVIAVSDMLQSIQVMQIP 361
LVIAVSDMLQSIQVM +P
Sbjct: 569 LVIAVSDMLQSIQVMNVP 586


>tr|Q6ZLB7|Q6ZLB7_ORYSJ Pyruvate kinase OS=Oryza sativa subsp.
japonica GN=OJ1014_E09.29-1 PE=3 SV=1
Length = 454

Score = 32.7 bits (73), Expect = 9.2
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = -2

Query: 414 LVIAVSDMLQSIQVMQIP 361
LVIA+SDMLQSIQVM +P
Sbjct: 437 LVIALSDMLQSIQVMNVP 454


>tr|Q69WE5|Q69WE5_ORYSJ Pyruvate kinase OS=Oryza sativa subsp.
japonica GN=OJ1014_E09.29-2 PE=2 SV=1
Length = 418

Score = 32.7 bits (73), Expect = 9.2
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = -2

Query: 414 LVIAVSDMLQSIQVMQIP 361
LVIA+SDMLQSIQVM +P
Sbjct: 401 LVIALSDMLQSIQVMNVP 418


>tr|Q0D867|Q0D867_ORYSJ Pyruvate kinase (Fragment) OS=Oryza sativa
subsp. japonica GN=Os07g0181000 PE=3 SV=1
Length = 561

Score = 32.7 bits (73), Expect = 9.2
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = -2

Query: 414 LVIAVSDMLQSIQVMQIP 361
LVIA+SDMLQSIQVM +P
Sbjct: 544 LVIALSDMLQSIQVMNVP 561


>tr|B8B7Z2|B8B7Z2_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_25125 PE=4 SV=1
Length = 581

Score = 32.7 bits (73), Expect = 9.2
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = -2

Query: 414 LVIAVSDMLQSIQVMQIP 361
LVIA+SDMLQSIQVM +P
Sbjct: 564 LVIALSDMLQSIQVMNVP 581