BP916298 |
Clone id |
YMU001_000086_B02 |
Library |
YMU01 |
Length |
496 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000086_B02. |
Accession |
BP916298 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL285Contig1 |
Sequence |
CAGTGGAGATGCAGCAAATCCTGCCTATTATCCACAGAAGAACCCTCAACGCCAGAACCA TGGAGCATGATATGAGGTGCATGACCACCAACAGCTGCACAGGCAGGAGGAGAAGGAAGA TATAGCTTGGATGAACGAACATTGTTGTTCATAGCCAACGTCGGCATGGGCGAGCAGAGA CATGCATACCAACACAGAGGAGCTCAAGGAGCACCTCAACAGCCTAAGGGACCCTTCTAC AAGTGTGGTGGAGACCATTGGCTAAGAGACTGTCCTCATGATGAAATCATTAGAGTCAAC GCATATTGCACCGAGTGTGGAATTACTCATTTAATTCCTGATTGCCCTAAGAACCCGACA AAAGGAGAAAAAACTACCTTGAACATGCTGGAAGCAGTGCCTTCCAGTGAAGGGTCAGAA AATGAGACAGTAATACCTATTCAGGCAGTGAGACGAGCCCAAGCTCAAAGAATGACGAAC AATAGCGCAGGTACTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P36627 |
Definition |
sp|P36627|BYR3_SCHPO Cellular nucleic acid-binding protein homolog OS=Schizosaccharomyces pombe |
Align length |
56 |
Score (bit) |
37.0 |
E-value |
0.05 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q2R394 |
Definition |
tr|Q2R394|Q2R394_ORYSJ Os11g0531300 protein OS=Oryza sativa subsp. japonica |
Align length |
50 |
Score (bit) |
39.7 |
E-value |
0.08 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916298|Adiantum capillus-veneris mRNA, clone: YMU001_000086_B02. (496 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q2R394|Q2R394_ORYSJ Os11g0531300 protein OS=Oryza sativa subs... 40 0.080 tr|B8BKV6|B8BKV6_ORYSI Putative uncharacterized protein OS=Oryza... 40 0.080 tr|Q7S753|Q7S753_NEUCR Putative uncharacterized protein OS=Neuro... 39 0.14 tr|A3CBX1|A3CBX1_ORYSJ Putative uncharacterized protein OS=Oryza... 37 0.40 tr|A5BQQ5|A5BQQ5_VITVI Putative uncharacterized protein OS=Vitis... 37 0.68 tr|Q16RW5|Q16RW5_AEDAE Calcium/calmodulin-dependent protein kina... 37 0.68 tr|Q2GYE1|Q2GYE1_CHAGB Putative uncharacterized protein OS=Chaet... 37 0.68 tr|Q3V5L3|Q3V5L3_9ASCI Vasa OS=Botryllus primigenus GN=Bpvas PE=... 36 0.88 tr|A0EC05|A0EC05_PARTE Chromosome undetermined scaffold_89, whol... 36 0.88 tr|B8P170|B8P170_9APHY Predicted protein OS=Postia placenta Mad-... 36 0.88 tr|B8PP69|B8PP69_9APHY Predicted protein (Fragment) OS=Postia pl... 36 1.2 tr|B8PI39|B8PI39_9APHY Predicted protein OS=Postia placenta Mad-... 36 1.2 tr|B8P1C8|B8P1C8_9APHY Predicted protein OS=Postia placenta Mad-... 36 1.2 tr|B2B810|B2B810_PODAN Predicted CDS Pa_2_12920 OS=Podospora ans... 36 1.2 tr|Q1HA65|Q1HA65_POLMI Vasa OS=Polyandrocarpa misakiensis GN=PmV... 35 2.0 tr|B6IGX1|B6IGX1_CAEBR Putative uncharacterized protein OS=Caeno... 35 2.0 tr|Q9IG05|Q9IG05_BLV Gag polyprotein OS=Bovine leukemia virus PE... 35 2.6 tr|B8PMS4|B8PMS4_9APHY Predicted protein OS=Postia placenta Mad-... 35 2.6 tr|B8P410|B8P410_9APHY Predicted protein OS=Postia placenta Mad-... 35 2.6 tr|B8P166|B8P166_9APHY Predicted protein OS=Postia placenta Mad-... 35 2.6 tr|B0CG70|B0CG70_ACAM1 Putative uncharacterized protein OS=Acary... 34 3.3 tr|A1VT73|A1VT73_POLNA Putative uncharacterized protein OS=Polar... 34 3.4 tr|B6IKW2|B6IKW2_CAEBR Putative uncharacterized protein OS=Caeno... 34 3.4 tr|B6IJP2|B6IJP2_CAEBR Putative uncharacterized protein OS=Caeno... 34 3.4 tr|B6IHW4|B6IHW4_CAEBR Putative uncharacterized protein OS=Caeno... 34 3.4 tr|B6IHV2|B6IHV2_CAEBR Putative uncharacterized protein OS=Caeno... 34 3.4 tr|B0EA52|B0EA52_ENTDI Zinc finger protein cchc domain containin... 34 3.4 tr|A0CDY0|A0CDY0_PARTE Chromosome undetermined scaffold_17, whol... 34 3.4 tr|Q75DF6|Q75DF6_ASHGO ABR070Cp OS=Ashbya gossypii GN=ABR070C PE... 34 3.4 tr|B8PN65|B8PN65_9APHY Predicted protein OS=Postia placenta Mad-... 34 3.4
>tr|Q2R394|Q2R394_ORYSJ Os11g0531300 protein OS=Oryza sativa subsp. japonica GN=Os11g0531300 PE=2 SV=1 Length = 445
Score = 39.7 bits (91), Expect = 0.080 Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 3/50 (6%) Frame = +1
Query: 208 GAPQQPKG-PFYKCGGD-HWLRDCPHDEIIRVNAYCTECG-ITHLIPDCP 348 G+P P+ P Y+CG D HW R+CP +N+ C CG + H +CP Sbjct: 394 GSPFTPRSNPCYRCGEDGHWSRNCPKPASSPLNSPCYNCGKLGHWRGNCP 443
>tr|B8BKV6|B8BKV6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_36349 PE=4 SV=1 Length = 445
Score = 39.7 bits (91), Expect = 0.080 Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 3/50 (6%) Frame = +1
Query: 208 GAPQQPKG-PFYKCGGD-HWLRDCPHDEIIRVNAYCTECG-ITHLIPDCP 348 G+P P+ P Y+CG D HW R+CP +N+ C CG + H +CP Sbjct: 394 GSPFTPRSNPCYRCGEDGHWSRNCPKPASSPLNSPCYNCGKLGHWRGNCP 443
>tr|Q7S753|Q7S753_NEUCR Putative uncharacterized protein OS=Neurospora crassa GN=NCU08923 PE=4 SV=1 Length = 183
Score = 38.9 bits (89), Expect = 0.14 Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Frame = +1
Query: 187 YQHRGAQGAPQQPKGPFYKCGG-DHWLRDCPHDEIIRVNAYCTECGIT-HLIPDCPKNPT 360 YQ+ G G P+ Y CGG H RDC + + C CG + H DCPK+ Sbjct: 108 YQNSGYGGGFGGPQKTCYSCGGIGHMSRDCVN------GSKCYNCGESGHFSRDCPKDSG 161
Query: 361 KGEK 372 GEK Sbjct: 162 SGEK 165
>tr|A3CBX1|A3CBX1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_032793 PE=4 SV=1 Length = 557
Score = 37.4 bits (85), Expect = 0.40 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%) Frame = +1
Query: 208 GAPQQPKG-PFYKCGGD-HWLRDCPHDEIIRVNAYCTECG 321 G+P P+ P Y+CG D HW R+CP +N+ C CG Sbjct: 407 GSPFTPRSNPCYRCGEDGHWSRNCPKPASSPLNSPCYNCG 446
>tr|A5BQQ5|A5BQQ5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032571 PE=4 SV=1 Length = 440
Score = 36.6 bits (83), Expect = 0.68 Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 8/97 (8%) Frame = +1
Query: 160 VGMGEQRHAYQHRG-AQGAPQQPKGPFYKCGGDHWLRDCPHDEII------RVNAYCTEC 318 +G G+ + ++ RG A+ PK +++C G HW +DCP + + R T Sbjct: 276 MGSGKNPNVWEGRGKAERKEFTPKIKYFQCDGPHWAQDCPKRKALNAMIEEREQEDETHM 335
Query: 319 GITHLIPDCPKNPTKGE-KTTLNMLEAVPSSEGSENE 426 G L+ NP + KT+L + V ++G E Sbjct: 336 GSMQLLGALQVNPKRSTLKTSLLLEVQVKEAKGERVE 372
>tr|Q16RW5|Q16RW5_AEDAE Calcium/calmodulin-dependent protein kinase kinase OS=Aedes aegypti GN=AAEL010804 PE=4 SV=1 Length = 734
Score = 36.6 bits (83), Expect = 0.68 Identities = 19/60 (31%), Positives = 26/60 (43%) Frame = +1
Query: 202 AQGAPQQPKGPFYKCGGDHWLRDCPHDEIIRVNAYCTECGITHLIPDCPKNPTKGEKTTL 381 A P++P GP + CGG H+ RDC TH DC ++ T + TL Sbjct: 35 ASSTPKRPSGPCWSCGGMHYSRDCSFK--------------THQCADCSRHQTLEMEGTL 80
>tr|Q2GYE1|Q2GYE1_CHAGB Putative uncharacterized protein OS=Chaetomium globosum GN=CHGG_07013 PE=4 SV=1 Length = 200
Score = 36.6 bits (83), Expect = 0.68 Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 2/47 (4%) Frame = +1
Query: 238 YKCGG-DHWLRDCPHDEIIRVNAYCTECGIT-HLIPDCPKNPTKGEK 372 Y CGG H RDC + + C CG++ H+ DCPK T GEK Sbjct: 143 YSCGGVGHVSRDCVN------GSKCYNCGVSGHVSRDCPKESTGGEK 183
>tr|Q3V5L3|Q3V5L3_9ASCI Vasa OS=Botryllus primigenus GN=Bpvas PE=2 SV=1 Length = 687
Score = 36.2 bits (82), Expect = 0.88 Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 2/71 (2%) Frame = +1
Query: 169 GEQRHAYQHRGAQGAPQQPKGPFYKCGGD-HWLRDCPHDEIIRVNAYCTECGIT-HLIPD 342 GE+ H + G +PKG F KCG + H RDCP+ C +CG H+ D Sbjct: 83 GEEGHMSRDCPNGGGDSRPKGCF-KCGEEGHMSRDCPNGGGDSRPKGCFKCGEEGHMSRD 141
Query: 343 CPKNPTKGEKT 375 CP G ++ Sbjct: 142 CPNGGEGGSRS 152
Score = 34.7 bits (78), Expect = 2.6 Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 2/62 (3%) Frame = +1
Query: 169 GEQRHAYQHRGAQGAPQQPKGPFYKCGGD-HWLRDCPHDEIIRVNAYCTECGIT-HLIPD 342 GE+ H + G +PKG F KCG + H RDCP+ C +CG H+ D Sbjct: 58 GEEGHMSRDCPNGGGSSRPKGCF-KCGEEGHMSRDCPNGGGDSRPKGCFKCGEEGHMSRD 116
Query: 343 CP 348 CP Sbjct: 117 CP 118
>tr|A0EC05|A0EC05_PARTE Chromosome undetermined scaffold_89, whole genome shotgun sequence OS=Paramecium tetraurelia GN=GSPATT00025558001 PE=4 SV=1 Length = 219
Score = 36.2 bits (82), Expect = 0.88 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 9/84 (10%) Frame = +1
Query: 214 PQQPKGPF-----YKCGGD-HWLRDCPHDEIIRVNAYCTECGITHLIPDCPKNPTKGEK- 372 PQ +GP + CG HW +C ++ C + G H+ DCPK+ + EK Sbjct: 77 PQGARGPTSRDVCFNCGRKGHWANECKEGDLRDTCYRCYKKG--HVRKDCPKSRSPSEKR 134
Query: 373 --TTLNMLEAVPSSEGSENETVIP 438 T + + V + GSE + +P Sbjct: 135 KYTQIQYVVVVETKTGSEGDLHLP 158
>tr|B8P170|B8P170_9APHY Predicted protein OS=Postia placenta Mad-698-R GN=POSPLDRAFT_98199 PE=4 SV=1 Length = 352
Score = 36.2 bits (82), Expect = 0.88 Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 4/51 (7%) Frame = +1
Query: 223 PKGPFYKCG-GDHWLRDCPHDEIIRVNAYCTECGIT---HLIPDCPKNPTK 363 PKG +CG HW+RDCP + CT CG HL +C P K Sbjct: 153 PKGSCRQCGLSQHWVRDCP-------DIRCTRCGKEAPGHLEQECRTRPMK 196
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