BP916298
Clone id YMU001_000086_B02
Library
Length 496
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000086_B02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CAGTGGAGATGCAGCAAATCCTGCCTATTATCCACAGAAGAACCCTCAACGCCAGAACCA
TGGAGCATGATATGAGGTGCATGACCACCAACAGCTGCACAGGCAGGAGGAGAAGGAAGA
TATAGCTTGGATGAACGAACATTGTTGTTCATAGCCAACGTCGGCATGGGCGAGCAGAGA
CATGCATACCAACACAGAGGAGCTCAAGGAGCACCTCAACAGCCTAAGGGACCCTTCTAC
AAGTGTGGTGGAGACCATTGGCTAAGAGACTGTCCTCATGATGAAATCATTAGAGTCAAC
GCATATTGCACCGAGTGTGGAATTACTCATTTAATTCCTGATTGCCCTAAGAACCCGACA
AAAGGAGAAAAAACTACCTTGAACATGCTGGAAGCAGTGCCTTCCAGTGAAGGGTCAGAA
AATGAGACAGTAATACCTATTCAGGCAGTGAGACGAGCCCAAGCTCAAAGAATGACGAAC
AATAGCGCAGGTACTC
■■Homology search results ■■ -
sp_hit_id P36627
Definition sp|P36627|BYR3_SCHPO Cellular nucleic acid-binding protein homolog OS=Schizosaccharomyces pombe
Align length 56
Score (bit) 37.0
E-value 0.05
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916298|Adiantum capillus-veneris mRNA, clone:
YMU001_000086_B02.
(496 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P36627|BYR3_SCHPO Cellular nucleic acid-binding protein homol... 37 0.050
sp|Q6T6T2|DISG2_BITGA Disintegrin gabonin-2 OS=Bitis gabonica PE... 35 0.19
sp|P43064|EFG1_CANAL Enhanced filamentous growth protein OS=Cand... 33 0.73
sp|Q6ZST2|ZCH23_HUMAN Zinc finger CCHC domain-containing protein... 33 0.95
sp|P03344|GAG_BLVJ Gag polyprotein OS=Bovine leukemia virus (iso... 33 0.95
sp|P25058|GAG_BLVAU Gag polyprotein OS=Bovine leukemia virus (is... 33 0.95
sp|Q6T6T3|DISG1_BITGA Disintegrin gabonin-1 OS=Bitis gabonica PE... 33 0.95
sp|P53388|DIP5_YEAST Dicarboxylic amino acid permease OS=Sacchar... 32 1.2
sp|Q8TY90|RL3_METKA 50S ribosomal protein L3P OS=Methanopyrus ka... 32 2.1
sp|P15671|NCAP_I79A7 Nucleoprotein OS=Influenza A virus (strain ... 32 2.1
sp|Q8C432|RN182_MOUSE RING finger protein 182 OS=Mus musculus GN... 31 3.6
sp|Q8N6D2|RN182_HUMAN RING finger protein 182 OS=Homo sapiens GN... 31 3.6
sp|P26059|NCAP_I77AE Nucleoprotein OS=Influenza A virus (strain ... 30 4.7
sp|P35728|MPE1_YEAST Protein MPE1 OS=Saccharomyces cerevisiae GN... 30 4.7
sp|P26069|NCAP_I40A0 Nucleoprotein OS=Influenza A virus (strain ... 30 6.1
sp|Q8BGX0|ARD1_MOUSE GTP-binding protein ARD-1 OS=Mus musculus G... 30 6.1
sp|Q9S9U0|CALSB_ARATH Callose synthase 11 OS=Arabidopsis thalian... 30 8.0

>sp|P36627|BYR3_SCHPO Cellular nucleic acid-binding protein homolog
OS=Schizosaccharomyces pombe GN=byr3 PE=2 SV=1
Length = 179

Score = 37.0 bits (84), Expect = 0.050
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1

Query: 193 HRGAQGAPQQPKGPFYKCG-GDHWLRDCPHDEIIRVNAYCTECG-ITHLIPDCPKN 354
H+ ++ Q + Y CG H +RDCP R A C +CG + H+ DC N
Sbjct: 46 HKASECTEPQQEKTCYACGTAGHLVRDCPSSPNPRQGAECYKCGRVGHIARDCRTN 101


>sp|Q6T6T2|DISG2_BITGA Disintegrin gabonin-2 OS=Bitis gabonica PE=1
SV=1
Length = 128

Score = 35.0 bits (79), Expect = 0.19
Identities = 19/46 (41%), Positives = 23/46 (50%)
Frame = +1

Query: 271 CPHDEIIRVNAYCTECGITHLIPDCPKNPTKGEKTTLNMLEAVPSS 408
C + +N YCT G+T PDCP+NP KGE L A S
Sbjct: 85 CKKTMLDGLNDYCT--GVT---PDCPRNPNKGESDELEWSAAATGS 125


>sp|P43064|EFG1_CANAL Enhanced filamentous growth protein OS=Candida
albicans GN=EFG1 PE=3 SV=1
Length = 552

Score = 33.1 bits (74), Expect = 0.73
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2

Query: 5 GDAANPAYYPQKNPQRQ-NHGA*YEVHDHQQLHRQEEKEDIAWMNEHCCS*PTSAWASRD 181
G AAN +YYP Q+Q N+ + Y QQ +Q++ ++ S P+ +R
Sbjct: 457 GGAANSSYYPNYYQQQQPNYASSYPYQQQQQKQQQQQPNQQQQSDQQQTSTPSGGAGTRS 516

Query: 182 MHTNTE 199
+H + +
Sbjct: 517 VHQSPQ 522


>sp|Q6ZST2|ZCH23_HUMAN Zinc finger CCHC domain-containing protein 23
OS=Homo sapiens GN=ZCCHC23 PE=2 SV=1
Length = 131

Score = 32.7 bits (73), Expect = 0.95
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1

Query: 208 GAPQQPKGPFYKCGGDHWLRDCP 276
G+ ++P P CGGDHW DCP
Sbjct: 81 GSMRKPARPCPICGGDHWRVDCP 103


>sp|P03344|GAG_BLVJ Gag polyprotein OS=Bovine leukemia virus
(isolate Japanese BLV-1) GN=gag PE=1 SV=3
Length = 392

Score = 32.7 bits (73), Expect = 0.95
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +1

Query: 205 QGAPQQPK-GPFYKCGGD-HWLRDCPHDEIIRVNAYCTEC-GITHLIPDCPKNPTK 363
Q AP++P GP Y+C + HW RDCP C C +H DCP +K
Sbjct: 336 QPAPKRPPPGPCYRCLKEGHWARDCPTKATGPPPGPCPICKDPSHWKRDCPTLKSK 391


>sp|P25058|GAG_BLVAU Gag polyprotein OS=Bovine leukemia virus
(isolate Australian) GN=gag PE=1 SV=3
Length = 392

Score = 32.7 bits (73), Expect = 0.95
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +1

Query: 205 QGAPQQPK-GPFYKCGGD-HWLRDCPHDEIIRVNAYCTEC-GITHLIPDCPKNPTK 363
Q AP++P GP Y+C + HW RDCP C C +H DCP +K
Sbjct: 336 QPAPKRPPPGPCYRCLKEGHWARDCPTKTTGPPPGPCPICKDPSHWKRDCPTLKSK 391


>sp|Q6T6T3|DISG1_BITGA Disintegrin gabonin-1 OS=Bitis gabonica PE=1
SV=1
Length = 128

Score = 32.7 bits (73), Expect = 0.95
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +1

Query: 304 YCTECGITHLIPDCPKNPTKGEKTTLNMLEAVPSS 408
YCT G+T PDCP+NP KGE L A S
Sbjct: 96 YCT--GVT---PDCPRNPNKGESDELEWSAAATGS 125


>sp|P53388|DIP5_YEAST Dicarboxylic amino acid permease
OS=Saccharomyces cerevisiae GN=DIP5 PE=1 SV=1
Length = 608

Score = 32.3 bits (72), Expect = 1.2
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = -3

Query: 440 IGITVSFSDPSLEGTASSMFKVVFSPFVGFLGQSGIK*VIPHSVQYALTLMISS 279
+G+ V+++DP L T SPFV + SGI+ V+PH + + + S
Sbjct: 339 LGMCVAYNDPRLLSTKGKSMSAAASPFVVAIQNSGIE-VLPHIFNACVLVFVFS 391


>sp|Q8TY90|RL3_METKA 50S ribosomal protein L3P OS=Methanopyrus
kandleri GN=rpl3p PE=3 SV=1
Length = 361

Score = 31.6 bits (70), Expect = 2.1
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Frame = +1

Query: 262 LRDCPHDEIIRVNAYCT-ECGITH--LIPDCPKNPTKGEKTT--LNMLEAVP 402
+R P +E +RV + + G+TH +I D P +PT+GE+ + + +L+A P
Sbjct: 32 IRSWPDEERVRVQGFAGYKAGMTHAIMIDDWPNSPTEGEEISVPVTILDAPP 83


>sp|P15671|NCAP_I79A7 Nucleoprotein OS=Influenza A virus (strain
A/Grey teal/Australia/2/1979 H4N4) GN=NP PE=3 SV=2
Length = 498

Score = 31.6 bits (70), Expect = 2.1
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 10/65 (15%)
Frame = +1

Query: 172 EQRHAY--QHRGAQGAPQQPKGPFYKCGGDHWLRD---CPHDEIIRV-----NAYCTECG 321
E+R+ Y +H A P++ GP Y+ W+R+ C +EI R+ N G
Sbjct: 73 ERRNKYLEEHPSAGKDPKKTGGPIYRRRDGKWIRELILCDKEEIRRIWRQANNGEDATAG 132

Query: 322 ITHLI 336
+THL+
Sbjct: 133 LTHLM 137


tr_hit_id Q2R394
Definition tr|Q2R394|Q2R394_ORYSJ Os11g0531300 protein OS=Oryza sativa subsp. japonica
Align length 50
Score (bit) 39.7
E-value 0.08
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916298|Adiantum capillus-veneris mRNA, clone:
YMU001_000086_B02.
(496 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q2R394|Q2R394_ORYSJ Os11g0531300 protein OS=Oryza sativa subs... 40 0.080
tr|B8BKV6|B8BKV6_ORYSI Putative uncharacterized protein OS=Oryza... 40 0.080
tr|Q7S753|Q7S753_NEUCR Putative uncharacterized protein OS=Neuro... 39 0.14
tr|A3CBX1|A3CBX1_ORYSJ Putative uncharacterized protein OS=Oryza... 37 0.40
tr|A5BQQ5|A5BQQ5_VITVI Putative uncharacterized protein OS=Vitis... 37 0.68
tr|Q16RW5|Q16RW5_AEDAE Calcium/calmodulin-dependent protein kina... 37 0.68
tr|Q2GYE1|Q2GYE1_CHAGB Putative uncharacterized protein OS=Chaet... 37 0.68
tr|Q3V5L3|Q3V5L3_9ASCI Vasa OS=Botryllus primigenus GN=Bpvas PE=... 36 0.88
tr|A0EC05|A0EC05_PARTE Chromosome undetermined scaffold_89, whol... 36 0.88
tr|B8P170|B8P170_9APHY Predicted protein OS=Postia placenta Mad-... 36 0.88
tr|B8PP69|B8PP69_9APHY Predicted protein (Fragment) OS=Postia pl... 36 1.2
tr|B8PI39|B8PI39_9APHY Predicted protein OS=Postia placenta Mad-... 36 1.2
tr|B8P1C8|B8P1C8_9APHY Predicted protein OS=Postia placenta Mad-... 36 1.2
tr|B2B810|B2B810_PODAN Predicted CDS Pa_2_12920 OS=Podospora ans... 36 1.2
tr|Q1HA65|Q1HA65_POLMI Vasa OS=Polyandrocarpa misakiensis GN=PmV... 35 2.0
tr|B6IGX1|B6IGX1_CAEBR Putative uncharacterized protein OS=Caeno... 35 2.0
tr|Q9IG05|Q9IG05_BLV Gag polyprotein OS=Bovine leukemia virus PE... 35 2.6
tr|B8PMS4|B8PMS4_9APHY Predicted protein OS=Postia placenta Mad-... 35 2.6
tr|B8P410|B8P410_9APHY Predicted protein OS=Postia placenta Mad-... 35 2.6
tr|B8P166|B8P166_9APHY Predicted protein OS=Postia placenta Mad-... 35 2.6
tr|B0CG70|B0CG70_ACAM1 Putative uncharacterized protein OS=Acary... 34 3.3
tr|A1VT73|A1VT73_POLNA Putative uncharacterized protein OS=Polar... 34 3.4
tr|B6IKW2|B6IKW2_CAEBR Putative uncharacterized protein OS=Caeno... 34 3.4
tr|B6IJP2|B6IJP2_CAEBR Putative uncharacterized protein OS=Caeno... 34 3.4
tr|B6IHW4|B6IHW4_CAEBR Putative uncharacterized protein OS=Caeno... 34 3.4
tr|B6IHV2|B6IHV2_CAEBR Putative uncharacterized protein OS=Caeno... 34 3.4
tr|B0EA52|B0EA52_ENTDI Zinc finger protein cchc domain containin... 34 3.4
tr|A0CDY0|A0CDY0_PARTE Chromosome undetermined scaffold_17, whol... 34 3.4
tr|Q75DF6|Q75DF6_ASHGO ABR070Cp OS=Ashbya gossypii GN=ABR070C PE... 34 3.4
tr|B8PN65|B8PN65_9APHY Predicted protein OS=Postia placenta Mad-... 34 3.4

>tr|Q2R394|Q2R394_ORYSJ Os11g0531300 protein OS=Oryza sativa subsp.
japonica GN=Os11g0531300 PE=2 SV=1
Length = 445

Score = 39.7 bits (91), Expect = 0.080
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +1

Query: 208 GAPQQPKG-PFYKCGGD-HWLRDCPHDEIIRVNAYCTECG-ITHLIPDCP 348
G+P P+ P Y+CG D HW R+CP +N+ C CG + H +CP
Sbjct: 394 GSPFTPRSNPCYRCGEDGHWSRNCPKPASSPLNSPCYNCGKLGHWRGNCP 443


>tr|B8BKV6|B8BKV6_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_36349 PE=4 SV=1
Length = 445

Score = 39.7 bits (91), Expect = 0.080
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +1

Query: 208 GAPQQPKG-PFYKCGGD-HWLRDCPHDEIIRVNAYCTECG-ITHLIPDCP 348
G+P P+ P Y+CG D HW R+CP +N+ C CG + H +CP
Sbjct: 394 GSPFTPRSNPCYRCGEDGHWSRNCPKPASSPLNSPCYNCGKLGHWRGNCP 443


>tr|Q7S753|Q7S753_NEUCR Putative uncharacterized protein
OS=Neurospora crassa GN=NCU08923 PE=4 SV=1
Length = 183

Score = 38.9 bits (89), Expect = 0.14
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +1

Query: 187 YQHRGAQGAPQQPKGPFYKCGG-DHWLRDCPHDEIIRVNAYCTECGIT-HLIPDCPKNPT 360
YQ+ G G P+ Y CGG H RDC + + C CG + H DCPK+
Sbjct: 108 YQNSGYGGGFGGPQKTCYSCGGIGHMSRDCVN------GSKCYNCGESGHFSRDCPKDSG 161

Query: 361 KGEK 372
GEK
Sbjct: 162 SGEK 165


>tr|A3CBX1|A3CBX1_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_032793 PE=4 SV=1
Length = 557

Score = 37.4 bits (85), Expect = 0.40
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1

Query: 208 GAPQQPKG-PFYKCGGD-HWLRDCPHDEIIRVNAYCTECG 321
G+P P+ P Y+CG D HW R+CP +N+ C CG
Sbjct: 407 GSPFTPRSNPCYRCGEDGHWSRNCPKPASSPLNSPCYNCG 446


>tr|A5BQQ5|A5BQQ5_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_032571 PE=4 SV=1
Length = 440

Score = 36.6 bits (83), Expect = 0.68
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Frame = +1

Query: 160 VGMGEQRHAYQHRG-AQGAPQQPKGPFYKCGGDHWLRDCPHDEII------RVNAYCTEC 318
+G G+ + ++ RG A+ PK +++C G HW +DCP + + R T
Sbjct: 276 MGSGKNPNVWEGRGKAERKEFTPKIKYFQCDGPHWAQDCPKRKALNAMIEEREQEDETHM 335

Query: 319 GITHLIPDCPKNPTKGE-KTTLNMLEAVPSSEGSENE 426
G L+ NP + KT+L + V ++G E
Sbjct: 336 GSMQLLGALQVNPKRSTLKTSLLLEVQVKEAKGERVE 372


>tr|Q16RW5|Q16RW5_AEDAE Calcium/calmodulin-dependent protein kinase
kinase OS=Aedes aegypti GN=AAEL010804 PE=4 SV=1
Length = 734

Score = 36.6 bits (83), Expect = 0.68
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +1

Query: 202 AQGAPQQPKGPFYKCGGDHWLRDCPHDEIIRVNAYCTECGITHLIPDCPKNPTKGEKTTL 381
A P++P GP + CGG H+ RDC TH DC ++ T + TL
Sbjct: 35 ASSTPKRPSGPCWSCGGMHYSRDCSFK--------------THQCADCSRHQTLEMEGTL 80


>tr|Q2GYE1|Q2GYE1_CHAGB Putative uncharacterized protein
OS=Chaetomium globosum GN=CHGG_07013 PE=4 SV=1
Length = 200

Score = 36.6 bits (83), Expect = 0.68
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +1

Query: 238 YKCGG-DHWLRDCPHDEIIRVNAYCTECGIT-HLIPDCPKNPTKGEK 372
Y CGG H RDC + + C CG++ H+ DCPK T GEK
Sbjct: 143 YSCGGVGHVSRDCVN------GSKCYNCGVSGHVSRDCPKESTGGEK 183


>tr|Q3V5L3|Q3V5L3_9ASCI Vasa OS=Botryllus primigenus GN=Bpvas PE=2
SV=1
Length = 687

Score = 36.2 bits (82), Expect = 0.88
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +1

Query: 169 GEQRHAYQHRGAQGAPQQPKGPFYKCGGD-HWLRDCPHDEIIRVNAYCTECGIT-HLIPD 342
GE+ H + G +PKG F KCG + H RDCP+ C +CG H+ D
Sbjct: 83 GEEGHMSRDCPNGGGDSRPKGCF-KCGEEGHMSRDCPNGGGDSRPKGCFKCGEEGHMSRD 141

Query: 343 CPKNPTKGEKT 375
CP G ++
Sbjct: 142 CPNGGEGGSRS 152



Score = 34.7 bits (78), Expect = 2.6
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +1

Query: 169 GEQRHAYQHRGAQGAPQQPKGPFYKCGGD-HWLRDCPHDEIIRVNAYCTECGIT-HLIPD 342
GE+ H + G +PKG F KCG + H RDCP+ C +CG H+ D
Sbjct: 58 GEEGHMSRDCPNGGGSSRPKGCF-KCGEEGHMSRDCPNGGGDSRPKGCFKCGEEGHMSRD 116

Query: 343 CP 348
CP
Sbjct: 117 CP 118


>tr|A0EC05|A0EC05_PARTE Chromosome undetermined scaffold_89, whole
genome shotgun sequence OS=Paramecium tetraurelia
GN=GSPATT00025558001 PE=4 SV=1
Length = 219

Score = 36.2 bits (82), Expect = 0.88
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Frame = +1

Query: 214 PQQPKGPF-----YKCGGD-HWLRDCPHDEIIRVNAYCTECGITHLIPDCPKNPTKGEK- 372
PQ +GP + CG HW +C ++ C + G H+ DCPK+ + EK
Sbjct: 77 PQGARGPTSRDVCFNCGRKGHWANECKEGDLRDTCYRCYKKG--HVRKDCPKSRSPSEKR 134

Query: 373 --TTLNMLEAVPSSEGSENETVIP 438
T + + V + GSE + +P
Sbjct: 135 KYTQIQYVVVVETKTGSEGDLHLP 158


>tr|B8P170|B8P170_9APHY Predicted protein OS=Postia placenta
Mad-698-R GN=POSPLDRAFT_98199 PE=4 SV=1
Length = 352

Score = 36.2 bits (82), Expect = 0.88
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +1

Query: 223 PKGPFYKCG-GDHWLRDCPHDEIIRVNAYCTECGIT---HLIPDCPKNPTK 363
PKG +CG HW+RDCP + CT CG HL +C P K
Sbjct: 153 PKGSCRQCGLSQHWVRDCP-------DIRCTRCGKEAPGHLEQECRTRPMK 196