BP916278
Clone id YMU001_000085_F08
Library
Length 239
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000085_F08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TCTGTAGTGGATGGTGATTGGGAGTTTGAAAAAGGTTTGAAAGGGGTAGTGAAGGCAATC
TCCTAACAATTGATCCGATGAAGGGAGAATTTGGAGGCTTGTCACTATCGGTTTGTAGGA
CTAACTACAAGCACTCACACTACATTTAAGGCTAAGAACTATCTGATCAATACATCAGGG
AGCTTGTAGATTTTTGTCGAGGCCTTTGTGGTGAATAGCTAGGGCTCTAATGTCAAAGA
■■Homology search results ■■ -
sp_hit_id Q9VQU9
Definition sp|Q9VQU9|BOWEL_DROME Protein bowel OS=Drosophila melanogaster
Align length 50
Score (bit) 32.7
E-value 0.58
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916278|Adiantum capillus-veneris mRNA, clone:
YMU001_000085_F08.
(239 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9VQU9|BOWEL_DROME Protein bowel OS=Drosophila melanogaster G... 33 0.58

>sp|Q9VQU9|BOWEL_DROME Protein bowel OS=Drosophila melanogaster
GN=bowl PE=1 SV=1
Length = 744

Score = 32.7 bits (73), Expect = 0.58
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 11/50 (22%)
Frame = -2

Query: 124 LVLQTDSDKPPNSP----------FIGSIVRRLPSLPLSNL-FQTPNHHP 8
++ Q +S KPPN P F+GSI R LP L P+HHP
Sbjct: 624 IITQPESGKPPNQPLHSPHEAMPSFLGSIPMRKRILPAPTLDLMDPHHHP 673


tr_hit_id B4I337
Definition tr|B4I337|B4I337_DROSE GM18436 OS=Drosophila sechellia
Align length 50
Score (bit) 33.1
E-value 7.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916278|Adiantum capillus-veneris mRNA, clone:
YMU001_000085_F08.
(239 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B4I337|B4I337_DROSE GM18436 OS=Drosophila sechellia GN=GM1843... 33 7.0
tr|B4Q9Q4|B4Q9Q4_DROSI GD23254 OS=Drosophila simulans GN=GD23254... 33 9.2
tr|B3N378|B3N378_DROER GG24967 OS=Drosophila erecta GN=GG24967 P... 33 9.2
tr|A4V047|A4V047_DROME Brother of odd with entrails limited, iso... 33 9.2

>tr|B4I337|B4I337_DROSE GM18436 OS=Drosophila sechellia GN=GM18436
PE=4 SV=1
Length = 226

Score = 33.1 bits (74), Expect = 7.0
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 11/50 (22%)
Frame = -2

Query: 124 LVLQTDSDKPPNSP----------FIGSIVRRLPSLPLSNL-FQTPNHHP 8
++ Q +S KPPN P F+GSI R LP +L P+HHP
Sbjct: 106 IITQPESGKPPNQPLHSPHEAMPSFLGSIPMRKRILPAPSLDLMDPHHHP 155


>tr|B4Q9Q4|B4Q9Q4_DROSI GD23254 OS=Drosophila simulans GN=GD23254
PE=4 SV=1
Length = 1439

Score = 32.7 bits (73), Expect = 9.2
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 11/50 (22%)
Frame = -2

Query: 124 LVLQTDSDKPPNSP----------FIGSIVRRLPSLPLSNL-FQTPNHHP 8
++ Q +S KPPN P F+GSI R LP L P+HHP
Sbjct: 624 IITQPESGKPPNQPLHSPHEAMPSFLGSIPMRKRILPAPTLDLMDPHHHP 673


>tr|B3N378|B3N378_DROER GG24967 OS=Drosophila erecta GN=GG24967 PE=4
SV=1
Length = 744

Score = 32.7 bits (73), Expect = 9.2
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 11/50 (22%)
Frame = -2

Query: 124 LVLQTDSDKPPNSP----------FIGSIVRRLPSLPLSNL-FQTPNHHP 8
++ Q +S KPPN P F+GSI R LP L P+HHP
Sbjct: 624 IITQPESGKPPNQPLHSPHEAMPSFLGSIPMRKRILPAPTLDLMDPHHHP 673


>tr|A4V047|A4V047_DROME Brother of odd with entrails limited,
isoform B OS=Drosophila melanogaster GN=bowl PE=4 SV=1
Length = 744

Score = 32.7 bits (73), Expect = 9.2
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 11/50 (22%)
Frame = -2

Query: 124 LVLQTDSDKPPNSP----------FIGSIVRRLPSLPLSNL-FQTPNHHP 8
++ Q +S KPPN P F+GSI R LP L P+HHP
Sbjct: 624 IITQPESGKPPNQPLHSPHEAMPSFLGSIPMRKRILPAPTLDLMDPHHHP 673