BP916252
Clone id YMU001_000085_B11
Library
Length 243
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000085_B11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GGCACGACAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGG
TCCCCTCGAATGCTCTAGCGCCCGCACCGGATATGGATCGAACTGTCTCACGACGTTCTG
AACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGGACGTACTACCGC
CCCAGGTGGCGAAGAGCCGACATCGAGGTGCCAAACCTTCCCGTCGATGTGAACTCTTGG
GGA
■■Homology search results ■■ -
sp_hit_id Q9PLI5
Definition sp|Q9PLI5|Y114_CHLMU Uncharacterized protein TC_0114 OS=Chlamydia muridarum
Align length 62
Score (bit) 89.4
E-value 5.0e-18
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916252|Adiantum capillus-veneris mRNA, clone:
YMU001_000085_B11.
(228 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9PLI5|Y114_CHLMU Uncharacterized protein TC_0114 OS=Chlamydi... 89 5e-18
sp|O10312|Y054_NPVOP Uncharacterized 42.5 kDa protein OS=Orgyia ... 30 3.8
sp|Q2IHD7|3MGH_ANADE Putative 3-methyladenine DNA glycosylase OS... 30 5.0
sp|P46881|PAOX_ARTGO Phenylethylamine oxidase OS=Arthrobacter gl... 29 8.5
sp|P17095|HMGA1_MOUSE High mobility group protein HMG-I/HMG-Y OS... 29 8.5
sp|A9KK75|DEOB_CLOPH Phosphopentomutase OS=Clostridium phytoferm... 29 8.5

>sp|Q9PLI5|Y114_CHLMU Uncharacterized protein TC_0114 OS=Chlamydia
muridarum GN=TC_0114 PE=4 SV=2
Length = 122

Score = 89.4 bits (220), Expect = 5e-18
Identities = 44/62 (70%), Positives = 47/62 (75%)
Frame = +3

Query: 39 GKVPSNALAPAPDMDRTVSRRSEPSSRTALMGEQPNPWDVLPPQVAKSRHRGAKPSRRCE 218
G P AP D D+TVSRR EPSSRTAL+GEQPNPWD+L PQ A SRHRGAKP RR E
Sbjct: 35 GTAPLKYPAPTKDRDQTVSRRFEPSSRTALIGEQPNPWDLLQPQDAMSRHRGAKPPRRYE 94

Query: 219 LL 224
LL
Sbjct: 95 LL 96


>sp|O10312|Y054_NPVOP Uncharacterized 42.5 kDa protein OS=Orgyia
pseudotsugata multicapsid polyhedrosis virus GN=ORF58
PE=4 SV=1
Length = 378

Score = 30.0 bits (66), Expect = 3.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1

Query: 192 LDVGSSPPGAVVRPKGWAVRPLKRYVSWVQN 100
L G +PPG ++ P V+ + RYV+W N
Sbjct: 279 LSYGGAPPGHLMCPPRAIVKKIYRYVNWASN 309


>sp|Q2IHD7|3MGH_ANADE Putative 3-methyladenine DNA glycosylase
OS=Anaeromyxobacter dehalogenans (strain 2CP-C)
GN=Adeh_4231 PE=3 SV=1
Length = 207

Score = 29.6 bits (65), Expect = 5.0
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Frame = -1

Query: 210 DGKVWHLDVGSSPPGAVV-RPKGWAVRPLKRYVSWVQNVVRQFDPYP----VRALEHSRG 46
D + H G +P A++ P G A L S NVV + +P +RA E G
Sbjct: 47 DDRASHARAGPTPRAAIMFGPPGRAYVYLIYGTSHCMNVVTGPEGFPSAVLIRAAEPIEG 106

Query: 45 PFPSTRGPG 19
STRGPG
Sbjct: 107 CLHSTRGPG 115


>sp|P46881|PAOX_ARTGO Phenylethylamine oxidase OS=Arthrobacter
globiformis PE=1 SV=1
Length = 638

Score = 28.9 bits (63), Expect = 8.5
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Frame = -1

Query: 216 HIDGKVWHLDVGSSPPGAVVRPK-----GWAVRPLKRYVSWVQNVVRQFDPYPVRALEH 55
HI+ + W LDVG VV G +RP+ S + VV DP P+R+ ++
Sbjct: 237 HIEWEKWSLDVGFDVREGVVLHNIAFRDGDRLRPIINRASIAEMVVPYGDPSPIRSWQN 295


>sp|P17095|HMGA1_MOUSE High mobility group protein HMG-I/HMG-Y
OS=Mus musculus GN=Hmga1 PE=1 SV=4
Length = 107

Score = 28.9 bits (63), Expect = 8.5
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 7/61 (11%)
Frame = +3

Query: 39 GKVPSNALAPAPDMDRTVSR-----RSEP--SSRTALMGEQPNPWDVLPPQVAKSRHRGA 197
G S LA + D T R R +P S TAL+G Q P +V P+ + R +G+
Sbjct: 5 GSKSSQPLASKQEKDGTEKRGRGRPRKQPPVSPGTALVGSQKEPSEVPTPKRPRGRPKGS 64

Query: 198 K 200
K
Sbjct: 65 K 65


>sp|A9KK75|DEOB_CLOPH Phosphopentomutase OS=Clostridium
phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg)
GN=deoB PE=3 SV=1
Length = 390

Score = 28.9 bits (63), Expect = 8.5
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Frame = -3

Query: 142 GCSPIKAVRELGSERRETVRSISGAG---ARAFEGTFP*YERTGK 17
G PI+ + RE + +G G AR FEG +P Y RT K
Sbjct: 163 GVVPIEELYRYCEIAREICKGPTGVGRVIARPFEGEYPDYRRTAK 207


tr_hit_id Q4EE25
Definition tr|Q4EE25|Q4EE25_LISMO Putative uncharacterized protein OS=Listeria monocytogenes str. 4b H7858
Align length 56
Score (bit) 105.0
E-value 1.0e-21
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916252|Adiantum capillus-veneris mRNA, clone:
YMU001_000085_B11.
(228 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q4EE25|Q4EE25_LISMO Putative uncharacterized protein OS=Liste... 105 1e-21
tr|A4QMC3|A4QMC3_PINKO ORF58f OS=Pinus koraiensis PE=4 SV=1 104 2e-21
tr|B2E6W4|B2E6W4_STRPN Putative uncharacterized protein OS=Strep... 104 3e-21
tr|Q8CQV6|Q8CQV6_STAES Putative uncharacterized protein OS=Staph... 103 4e-21
tr|Q848W1|Q848W1_BACME Putative uncharacterized protein OS=Bacil... 103 4e-21
tr|B5CLP4|B5CLP4_9FIRM Putative uncharacterized protein OS=Rumin... 103 6e-21
tr|A5ZQM3|A5ZQM3_9FIRM Putative uncharacterized protein OS=Rumin... 102 7e-21
tr|A5Z309|A5Z309_9FIRM Putative uncharacterized protein OS=Eubac... 102 7e-21
tr|B0N9Z0|B0N9Z0_EUBSP Putative uncharacterized protein OS=Clost... 102 1e-20
tr|A8RZC0|A8RZC0_9CLOT Putative uncharacterized protein OS=Clost... 102 1e-20
tr|B6G1S6|B6G1S6_9CLOT Putative uncharacterized protein OS=Clost... 101 2e-20
tr|B6W6V6|B6W6V6_9FIRM Putative uncharacterized protein (Fragmen... 100 3e-20
tr|A7B5W3|A7B5W3_RUMGN Putative uncharacterized protein OS=Rumin... 100 4e-20
tr|A6BKY8|A6BKY8_9FIRM Putative uncharacterized protein OS=Dorea... 100 4e-20
tr|A6BGW2|A6BGW2_9FIRM Putative uncharacterized protein OS=Dorea... 100 4e-20
tr|A5Z493|A5Z493_9FIRM Putative uncharacterized protein OS=Eubac... 100 4e-20
tr|A5Z2Z5|A5Z2Z5_9FIRM Putative uncharacterized protein OS=Eubac... 100 4e-20
tr|B7R8W6|B7R8W6_9THEO Putative uncharacterized protein OS=Carbo... 100 6e-20
tr|A5ZYK8|A5ZYK8_9FIRM Putative uncharacterized protein OS=Rumin... 99 1e-19
tr|A5KMC5|A5KMC5_9FIRM Putative uncharacterized protein OS=Rumin... 99 1e-19
tr|B0TIE8|B0TIE8_HELMI Putative uncharacterized protein OS=Helio... 98 2e-19
tr|A5KRJ2|A5KRJ2_9FIRM Putative uncharacterized protein OS=Rumin... 97 5e-19
tr|B0NX15|B0NX15_9CLOT Putative uncharacterized protein OS=Clost... 96 7e-19
tr|B0NWR5|B0NWR5_9CLOT Putative uncharacterized protein (Fragmen... 96 7e-19
tr|Q4HIX7|Q4HIX7_CAMLA Cell wall-associated hydrolase, putative ... 96 1e-18
tr|B5QJ43|B5QJ43_CAMJE Putative cell wall-associated hydrolase O... 96 1e-18
tr|Q4EFZ9|Q4EFZ9_LISMO Putative uncharacterized protein OS=Liste... 95 2e-18
tr|B1QRZ4|B1QRZ4_CLOBO Cell wall-associated hydrolase OS=Clostri... 95 2e-18
tr|B0PBI1|B0PBI1_9FIRM Putative uncharacterized protein OS=Anaer... 95 2e-18
tr|A8STI0|A8STI0_9FIRM Putative uncharacterized protein OS=Copro... 95 2e-18

>tr|Q4EE25|Q4EE25_LISMO Putative uncharacterized protein OS=Listeria
monocytogenes str. 4b H7858 GN=LMOh7858_1903 PE=4 SV=1
Length = 112

Score = 105 bits (262), Expect = 1e-21
Identities = 48/56 (85%), Positives = 50/56 (89%)
Frame = -1

Query: 225 PRVHIDGKVWHLDVGSSPPGAVVRPKGWAVRPLKRYVSWVQNVVRQFDPYPVRALE 58
PRVHIDG+VWHLDVGSS PGAVV PKGWAVRPLKR+ SWVQNVVRQF PYP RA E
Sbjct: 56 PRVHIDGEVWHLDVGSSHPGAVVGPKGWAVRPLKRHASWVQNVVRQFGPYPSRAQE 111


>tr|A4QMC3|A4QMC3_PINKO ORF58f OS=Pinus koraiensis PE=4 SV=1
Length = 58

Score = 104 bits (260), Expect = 2e-21
Identities = 49/50 (98%), Positives = 50/50 (100%)
Frame = +3

Query: 78 MDRTVSRRSEPSSRTALMGEQPNPWDVLPPQVAKSRHRGAKPSRRCELLG 227
MDRTVSRRSEPSSRTALMGEQPNPW+VLPPQVAKSRHRGAKPSRRCELLG
Sbjct: 1 MDRTVSRRSEPSSRTALMGEQPNPWNVLPPQVAKSRHRGAKPSRRCELLG 50


>tr|B2E6W4|B2E6W4_STRPN Putative uncharacterized protein
OS=Streptococcus pneumoniae MLV-016 GN=SPMLV016_A0105
PE=4 SV=1
Length = 77

Score = 104 bits (259), Expect = 3e-21
Identities = 47/54 (87%), Positives = 49/54 (90%)
Frame = -1

Query: 225 PRVHIDGKVWHLDVGSSPPGAVVRPKGWAVRPLKRYVSWVQNVVRQFDPYPVRA 64
PRVHIDG+VWHLDVGSS PGAVV PKGWAVRPLKR+ SWVQNVVRQF PYP RA
Sbjct: 24 PRVHIDGEVWHLDVGSSHPGAVVGPKGWAVRPLKRHASWVQNVVRQFGPYPSRA 77


>tr|Q8CQV6|Q8CQV6_STAES Putative uncharacterized protein
OS=Staphylococcus epidermidis (strain ATCC 12228)
GN=SE_2264 PE=4 SV=1
Length = 77

Score = 103 bits (257), Expect = 4e-21
Identities = 46/51 (90%), Positives = 47/51 (92%)
Frame = -1

Query: 225 PRVHIDGKVWHLDVGSSPPGAVVRPKGWAVRPLKRYVSWVQNVVRQFDPYP 73
PRVHIDG+VWHLDVGSS PGAVV PKGWAVRPLKRY SWVQNVVRQF PYP
Sbjct: 24 PRVHIDGEVWHLDVGSSHPGAVVGPKGWAVRPLKRYASWVQNVVRQFGPYP 74


>tr|Q848W1|Q848W1_BACME Putative uncharacterized protein OS=Bacillus
megaterium PE=4 SV=1
Length = 95

Score = 103 bits (257), Expect = 4e-21
Identities = 46/51 (90%), Positives = 47/51 (92%)
Frame = -1

Query: 225 PRVHIDGKVWHLDVGSSPPGAVVRPKGWAVRPLKRYVSWVQNVVRQFDPYP 73
PRVHIDG+VWHLDVGSS PGAVV PKGWAVRPLKRY SWVQNVVRQF PYP
Sbjct: 42 PRVHIDGEVWHLDVGSSHPGAVVGPKGWAVRPLKRYASWVQNVVRQFGPYP 92


>tr|B5CLP4|B5CLP4_9FIRM Putative uncharacterized protein
OS=Ruminococcus lactaris ATCC 29176 GN=RUMLAC_00366 PE=4
SV=1
Length = 105

Score = 103 bits (256), Expect = 6e-21
Identities = 49/60 (81%), Positives = 50/60 (83%)
Frame = +3

Query: 48 PSNALAPAPDMDRTVSRRSEPSSRTALMGEQPNPWDVLPPQVAKSRHRGAKPSRRCELLG 227
P L P PD DRTVSRRSEPSSRTALMGEQPNPWD+L PQ A SRHRGAKP RRCELLG
Sbjct: 38 PLKYLTPTPDRDRTVSRRSEPSSRTALMGEQPNPWDLLQPQDAMSRHRGAKPLRRCELLG 97


>tr|A5ZQM3|A5ZQM3_9FIRM Putative uncharacterized protein
OS=Ruminococcus obeum ATCC 29174 GN=RUMOBE_01295 PE=4
SV=1
Length = 109

Score = 102 bits (255), Expect = 7e-21
Identities = 47/54 (87%), Positives = 47/54 (87%)
Frame = -1

Query: 225 PRVHIDGKVWHLDVGSSPPGAVVRPKGWAVRPLKRYVSWVQNVVRQFDPYPVRA 64
PRVHIDG VWHLDVGSS PGAVV PKGWAVRPLKRY SWVQNVVRQF PYP A
Sbjct: 56 PRVHIDGVVWHLDVGSSHPGAVVGPKGWAVRPLKRYASWVQNVVRQFGPYPAWA 109


>tr|A5Z309|A5Z309_9FIRM Putative uncharacterized protein
OS=Eubacterium ventriosum ATCC 27560 GN=EUBVEN_00040
PE=4 SV=1
Length = 74

Score = 102 bits (255), Expect = 7e-21
Identities = 47/54 (87%), Positives = 47/54 (87%)
Frame = -1

Query: 225 PRVHIDGKVWHLDVGSSPPGAVVRPKGWAVRPLKRYVSWVQNVVRQFDPYPVRA 64
PRVHIDG VWHLDVGSS PGAVV PKGWAVRPLKRY SWVQNVVRQF PYP A
Sbjct: 21 PRVHIDGVVWHLDVGSSHPGAVVGPKGWAVRPLKRYASWVQNVVRQFGPYPAWA 74


>tr|B0N9Z0|B0N9Z0_EUBSP Putative uncharacterized protein
OS=Clostridium scindens ATCC 35704 GN=CLOSCI_00252 PE=4
SV=1
Length = 105

Score = 102 bits (253), Expect = 1e-20
Identities = 48/54 (88%), Positives = 49/54 (90%)
Frame = +3

Query: 66 PAPDMDRTVSRRSEPSSRTALMGEQPNPWDVLPPQVAKSRHRGAKPSRRCELLG 227
PAPD DRTVSRRSEPSSRTALMGEQPNPWD+L PQ A SRHRGAKP RRCELLG
Sbjct: 44 PAPDRDRTVSRRSEPSSRTALMGEQPNPWDLLQPQDAMSRHRGAKPLRRCELLG 97


>tr|A8RZC0|A8RZC0_9CLOT Putative uncharacterized protein
OS=Clostridium bolteae ATCC BAA-613 GN=CLOBOL_05384 PE=4
SV=1
Length = 105

Score = 102 bits (253), Expect = 1e-20
Identities = 48/54 (88%), Positives = 49/54 (90%)
Frame = +3

Query: 66 PAPDMDRTVSRRSEPSSRTALMGEQPNPWDVLPPQVAKSRHRGAKPSRRCELLG 227
PAPD DRTVSRRSEPSSRTALMGEQPNPWD+L PQ A SRHRGAKP RRCELLG
Sbjct: 44 PAPDRDRTVSRRSEPSSRTALMGEQPNPWDLLQPQDAMSRHRGAKPLRRCELLG 97