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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916228
Clone id YMU001_000084_G09
Library
Length 534
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000084_G09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GAATGAGCTTTTTGGCTTAAGGCTTATAATTATTGACCTTGAGGGTTCCTGCTTAATGGC
TTAATTAGGCTGACGTTCGTAATTAAGAAGCTGTCGATCACCAAGAAGATCATCAACAAT
TTGCGGCAATATGGCGCTTACAGAGATGGGATTTTATTGCTTTCTGCTCAAACTGGTGTA
ATGGGTGTTTTCTGTGAATGGAAGCAGTAGTGCTAGTACGGTAGAAGCAGCTAGGCAACA
GAACTCACCTTATAGAGACCATGAGAAGCTGCTGCTGCCTTTTGCAGGCTTACAGAAATG
AGGATTATTGTCTTAGTTTTGGATGGGTGTCTTGTGAATATGGGTACTAGTTGTGAGGAC
GAAGGTGGACGGAAGCAGCAGGAAAAAGAGCTCATCTCAAAGAGGAAAACTGCTGCTGCG
GAGATGGCGGCATCTTGCGCGCAACGATGACAGAGTTAACGACCTCATCGGTGGGGTGGA
ACTCAGAGAGGACCTCGAAACCGGGTTCCAACAGCATGTCGTTGTGGACGATGG
■■Homology search results ■■ -
sp_hit_id Q9XGI7
Definition sp|Q9XGI7|NAS_SOLLC Nicotianamine synthase OS=Solanum lycopersicum
Align length 25
Score (bit) 47.8
E-value 3.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916228|Adiantum capillus-veneris mRNA, clone:
YMU001_000084_G09.
         (534 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9XGI7|NAS_SOLLC Nicotianamine synthase OS=Solanum lycopersic...    48   3e-05
sp|Q9C7X5|NAS4_ARATH Probable nicotianamine synthase 4 OS=Arabid...    43   8e-04
sp|Q10MI9|NAS2_ORYSJ Nicotianamine synthase 2 OS=Oryza sativa su...    42   0.001
sp|A2XFU5|NAS2_ORYSI Nicotianamine synthase 2 OS=Oryza sativa su...    42   0.001
sp|O80483|NAS3_ARATH Nicotianamine synthase 3 OS=Arabidopsis tha...    42   0.002
sp|Q9XFB7|NAS9_HORVU Nicotianamine synthase 9 OS=Hordeum vulgare...    41   0.003
sp|Q9FKT9|NAS2_ARATH Nicotianamine synthase 2 OS=Arabidopsis tha...    41   0.004
sp|Q9FF79|NAS1_ARATH Nicotianamine synthase 1 OS=Arabidopsis tha...    40   0.005
sp|Q0DSH9|NAS1_ORYSJ Nicotianamine synthase 1 OS=Oryza sativa su...    39   0.016
sp|A2XFU4|NAS1_ORYSI Nicotianamine synthase 1 OS=Oryza sativa su...    39   0.016
sp|Q0D3F2|NAS3_ORYSJ Nicotianamine synthase 3 OS=Oryza sativa su...    38   0.027
sp|A2YQ58|NAS3_ORYSI Nicotianamine synthase 3 OS=Oryza sativa su...    38   0.027
sp|Q9ZQV9|NAS1_HORVU Nicotianamine synthase 1 OS=Hordeum vulgare...    38   0.035
sp|Q9ZWH8|NAS7_HORVU Probable nicotianamine synthase 7 OS=Hordeu...    37   0.078
sp|Q9ZQV6|NAS4_HORVU Probable nicotianamine synthase 4 OS=Hordeu...    37   0.078
sp|Q9ZQV8|NAS3_HORVU Probable nicotianamine synthase 3 OS=Hordeu...    37   0.078
sp|Q9ZQV7|NAS2_HORVU Probable nicotianamine synthase 2 OS=Hordeu...    37   0.078
sp|Q9XFB6|NAS8_HORVU Nicotianamine synthase 8 OS=Hordeum vulgare...    36   0.10 
sp|Q9ZQV3|NAS6_HORVU Probable nicotianamine synthase 6 OS=Hordeu...    36   0.10 
sp|Q9ZQV4|NAS5_HORVU Nicotianamine synthase-like 5 protein OS=Ho...    32   1.5  
sp|Q63624|SFR19_RAT Splicing factor, arginine/serine-rich 19 OS=...    30   7.3  
sp|Q5U4C3|SFR19_MOUSE Splicing factor, arginine/serine-rich 19 O...    30   7.3  
sp|Q9H7N4|SFR19_HUMAN Splicing factor, arginine/serine-rich 19 O...    30   7.3  

>sp|Q9XGI7|NAS_SOLLC Nicotianamine synthase OS=Solanum lycopersicum
           GN=CHLN PE=2 SV=1
          Length = 317

 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 20/25 (80%), Positives = 24/25 (96%)
 Frame = -3

Query: 502 GFEVLSEFHPTDEVVNSVIVARKMP 428
           GFEVLS +HPTDEV+NSVI+ARK+P
Sbjct: 250 GFEVLSVYHPTDEVINSVIIARKLP 274


>sp|Q9C7X5|NAS4_ARATH Probable nicotianamine synthase 4
           OS=Arabidopsis thaliana GN=NAS4 PE=2 SV=1
          Length = 324

 Score = 43.1 bits (100), Expect = 8e-04
 Identities = 16/24 (66%), Positives = 23/24 (95%)
 Frame = -3

Query: 502 GFEVLSEFHPTDEVVNSVIVARKM 431
           GFEVLS +HPTDEV+NS++++RK+
Sbjct: 253 GFEVLSVYHPTDEVINSIVISRKL 276


>sp|Q10MI9|NAS2_ORYSJ Nicotianamine synthase 2 OS=Oryza sativa
           subsp. japonica GN=NAS2 PE=2 SV=1
          Length = 326

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 20/36 (55%), Positives = 26/36 (72%)
 Frame = -3

Query: 532 IVHNDMLLEPGFEVLSEFHPTDEVVNSVIVARKMPP 425
           IV  + +   GF+VL+ +HP DEV+NSVIVARK  P
Sbjct: 246 IVDLEDIRRGGFDVLAVYHPDDEVINSVIVARKADP 281


>sp|A2XFU5|NAS2_ORYSI Nicotianamine synthase 2 OS=Oryza sativa
           subsp. indica GN=NAS2 PE=2 SV=2
          Length = 326

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 20/36 (55%), Positives = 26/36 (72%)
 Frame = -3

Query: 532 IVHNDMLLEPGFEVLSEFHPTDEVVNSVIVARKMPP 425
           IV  + +   GF+VL+ +HP DEV+NSVIVARK  P
Sbjct: 246 IVDLEDIRRGGFDVLAVYHPDDEVINSVIVARKADP 281


>sp|O80483|NAS3_ARATH Nicotianamine synthase 3 OS=Arabidopsis
           thaliana GN=NAS3 PE=2 SV=1
          Length = 320

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 16/25 (64%), Positives = 23/25 (92%)
 Frame = -3

Query: 502 GFEVLSEFHPTDEVVNSVIVARKMP 428
           GFEVLS +HPTD+V+NSV++++K P
Sbjct: 252 GFEVLSIYHPTDDVINSVVISKKHP 276


>sp|Q9XFB7|NAS9_HORVU Nicotianamine synthase 9 OS=Hordeum vulgare
           GN=NAS9 PE=1 SV=1
          Length = 340

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 19/38 (50%), Positives = 25/38 (65%)
 Frame = -3

Query: 532 IVHNDMLLEPGFEVLSEFHPTDEVVNSVIVARKMPPSP 419
           +V  + +   GFEVL+  HP DEV+NSVI+ARK    P
Sbjct: 252 VVDPEEIRRGGFEVLTVHHPEDEVINSVIIARKAAAPP 289


>sp|Q9FKT9|NAS2_ARATH Nicotianamine synthase 2 OS=Arabidopsis
           thaliana GN=NAS2 PE=2 SV=1
          Length = 320

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 16/24 (66%), Positives = 23/24 (95%)
 Frame = -3

Query: 502 GFEVLSEFHPTDEVVNSVIVARKM 431
           GFEVL+ +HP+D+VVNSV++ARK+
Sbjct: 252 GFEVLTIYHPSDDVVNSVVIARKL 275


>sp|Q9FF79|NAS1_ARATH Nicotianamine synthase 1 OS=Arabidopsis
           thaliana GN=NAS1 PE=2 SV=1
          Length = 320

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 17/30 (56%), Positives = 26/30 (86%), Gaps = 2/30 (6%)
 Frame = -3

Query: 502 GFEVLSEFHPTDEVVNSVIVARKM--PPSP 419
           GF++L+ +HPTD+VVNSV++ARK+  P +P
Sbjct: 253 GFQLLTIYHPTDDVVNSVVIARKLGGPTTP 282


>sp|Q0DSH9|NAS1_ORYSJ Nicotianamine synthase 1 OS=Oryza sativa
           subsp. japonica GN=NAS1 PE=2 SV=1
          Length = 332

 Score = 38.9 bits (89), Expect = 0.016
 Identities = 19/34 (55%), Positives = 25/34 (73%)
 Frame = -3

Query: 532 IVHNDMLLEPGFEVLSEFHPTDEVVNSVIVARKM 431
           IV  + +   GF+VL+  HP DEV+NSVIVARK+
Sbjct: 246 IVDPEDVRRGGFDVLAVCHPEDEVINSVIVARKV 279


>sp|A2XFU4|NAS1_ORYSI Nicotianamine synthase 1 OS=Oryza sativa
           subsp. indica GN=NAS1 PE=2 SV=2
          Length = 332

 Score = 38.9 bits (89), Expect = 0.016
 Identities = 19/34 (55%), Positives = 25/34 (73%)
 Frame = -3

Query: 532 IVHNDMLLEPGFEVLSEFHPTDEVVNSVIVARKM 431
           IV  + +   GF+VL+  HP DEV+NSVIVARK+
Sbjct: 246 IVDPEDVRRGGFDVLAVCHPEDEVINSVIVARKV 279
tr_hit_id A7PRR6
Definition tr|A7PRR6|A7PRR6_VITVI Chromosome chr14 scaffold_27, whole genome shotgun sequence OS=Vitis vinifera
Align length 25
Score (bit) 47.8
E-value 0.0004
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916228|Adiantum capillus-veneris mRNA, clone:
YMU001_000084_G09.
         (534 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7PRR6|A7PRR6_VITVI Chromosome chr14 scaffold_27, whole genom...    48   4e-04
tr|A5B0Y3|A5B0Y3_VITVI Putative uncharacterized protein OS=Vitis...    48   4e-04
tr|A2Q2X7|A2Q2X7_MEDTR Nicotianamine synthase OS=Medicago trunca...    45   0.002
tr|A3DUI9|A3DUI9_MALXI Nicotianamine synthase OS=Malus xiaojinen...    45   0.003
tr|Q8GU17|Q8GU17_THLCA Nicotianamine synthase OS=Thlaspi caerule...    44   0.005
tr|Q6L5P3|Q6L5P3_ARATH Nicotianamine synthase OS=Arabidopsis tha...    43   0.009
tr|Q8LT19|Q8LT19_MAIZE ZmNAS2 protein OS=Zea mays GN=ZmNAS2 PE=2...    43   0.012
tr|Q10MJ0|Q10MJ0_ORYSJ Nicotianamine synthase 2, putative, expre...    42   0.015
tr|B8AMH0|B8AMH0_ORYSI Putative uncharacterized protein OS=Oryza...    42   0.015
tr|Q70II1|Q70II1_ARAHA Putative nicotianamine synthase OS=Arabid...    42   0.020
tr|B6U2X3|B6U2X3_MAIZE Nicotianamine synthase 3 OS=Zea mays PE=2...    42   0.026
tr|A7Q6G7|A7Q6G7_VITVI Chromosome chr11 scaffold_56, whole genom...    41   0.034
tr|A5BHX9|A5BHX9_VITVI Putative uncharacterized protein OS=Vitis...    41   0.034
tr|B4FAC0|B4FAC0_MAIZE Putative uncharacterized protein OS=Zea m...    41   0.044
tr|Q8S9C5|Q8S9C5_MAIZE ZmNAS1 protein OS=Zea mays GN=ZmNAS1 PE=2...    40   0.057
tr|Q3S4I5|Q3S4I5_TRIMO Nicotianamine sythase 3 (Fragment) OS=Tri...    40   0.075
tr|Q10MI8|Q10MI8_ORYSJ Nicotianamine synthase 1, putative, expre...    39   0.17 
tr|Q8LT22|Q8LT22_MAIZE Nicotianamine synthase 3 OS=Zea mays GN=Z...    37   0.63 
tr|B6TZC0|B6TZC0_MAIZE Nicotianamine synthase 3 OS=Zea mays PE=2...    36   1.1  
tr|Q0UEH5|Q0UEH5_PHANO Putative uncharacterized protein OS=Phaeo...    33   7.0  
tr|Q11QZ7|Q11QZ7_CYTH3 Putative uncharacterized protein OS=Cytop...    33   9.3  

>tr|A7PRR6|A7PRR6_VITVI Chromosome chr14 scaffold_27, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00022605001
           PE=4 SV=1
          Length = 308

 Score = 47.8 bits (112), Expect = 4e-04
 Identities = 21/25 (84%), Positives = 23/25 (92%)
 Frame = -3

Query: 502 GFEVLSEFHPTDEVVNSVIVARKMP 428
           GFEVLS FHPTDEV+NSV+VARK P
Sbjct: 249 GFEVLSIFHPTDEVINSVVVARKFP 273


>tr|A5B0Y3|A5B0Y3_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_020491 PE=4 SV=1
          Length = 308

 Score = 47.8 bits (112), Expect = 4e-04
 Identities = 21/25 (84%), Positives = 23/25 (92%)
 Frame = -3

Query: 502 GFEVLSEFHPTDEVVNSVIVARKMP 428
           GFEVLS FHPTDEV+NSV+VARK P
Sbjct: 249 GFEVLSIFHPTDEVINSVVVARKFP 273


>tr|A2Q2X7|A2Q2X7_MEDTR Nicotianamine synthase OS=Medicago
           truncatula GN=MtrDRAFT_AC152185g32v2 PE=4 SV=1
          Length = 282

 Score = 45.4 bits (106), Expect = 0.002
 Identities = 21/23 (91%), Positives = 22/23 (95%)
 Frame = -3

Query: 502 GFEVLSEFHPTDEVVNSVIVARK 434
           GFEVLS FHPTDEV+NSVIVARK
Sbjct: 251 GFEVLSIFHPTDEVINSVIVARK 273


>tr|A3DUI9|A3DUI9_MALXI Nicotianamine synthase OS=Malus xiaojinensis
           PE=2 SV=1
          Length = 325

 Score = 44.7 bits (104), Expect = 0.003
 Identities = 18/23 (78%), Positives = 22/23 (95%)
 Frame = -3

Query: 502 GFEVLSEFHPTDEVVNSVIVARK 434
           GFEVLS FHPTDEV+NS+++ARK
Sbjct: 250 GFEVLSVFHPTDEVINSIVIARK 272


>tr|Q8GU17|Q8GU17_THLCA Nicotianamine synthase OS=Thlaspi
           caerulescens GN=nas1 PE=2 SV=1
          Length = 321

 Score = 43.9 bits (102), Expect = 0.005
 Identities = 18/41 (43%), Positives = 28/41 (68%)
 Frame = -3

Query: 502 GFEVLSEFHPTDEVVNSVIVARKMPPSPQQQFSSLR*ALFP 380
           GFEVLS +HPTD+V+NSV++++K+P    +    +   L P
Sbjct: 252 GFEVLSIYHPTDDVINSVVISKKLPVVSTENVGGVSCLLMP 292


>tr|Q6L5P3|Q6L5P3_ARATH Nicotianamine synthase OS=Arabidopsis
           thaliana GN=AtNAS4 PE=4 SV=1
          Length = 324

 Score = 43.1 bits (100), Expect = 0.009
 Identities = 16/24 (66%), Positives = 23/24 (95%)
 Frame = -3

Query: 502 GFEVLSEFHPTDEVVNSVIVARKM 431
           GFEVLS +HPTDEV+NS++++RK+
Sbjct: 253 GFEVLSVYHPTDEVINSIVISRKL 276


>tr|Q8LT19|Q8LT19_MAIZE ZmNAS2 protein OS=Zea mays GN=ZmNAS2 PE=2
           SV=1
          Length = 601

 Score = 42.7 bits (99), Expect = 0.012
 Identities = 20/45 (44%), Positives = 30/45 (66%)
 Frame = -3

Query: 532 IVHNDMLLEPGFEVLSEFHPTDEVVNSVIVARKMPPSPQQQFSSL 398
           IV  + +   GF+VL+ +HP DEV+NSVI+ARK+      + S+L
Sbjct: 245 IVDPEDIRRGGFDVLTVYHPDDEVINSVIIARKIDAHANTEVSAL 289



 Score = 41.2 bits (95), Expect = 0.034
 Identities = 19/34 (55%), Positives = 26/34 (76%)
 Frame = -3

Query: 532 IVHNDMLLEPGFEVLSEFHPTDEVVNSVIVARKM 431
           IV  + +   GF+VL+ +HP DEV+NSVIVARK+
Sbjct: 523 IVDPEDIRRGGFDVLAVYHPDDEVINSVIVARKI 556


>tr|Q10MJ0|Q10MJ0_ORYSJ Nicotianamine synthase 2, putative,
           expressed OS=Oryza sativa subsp. japonica
           GN=LOC_Os03g19420 PE=4 SV=1
          Length = 328

 Score = 42.4 bits (98), Expect = 0.015
 Identities = 20/36 (55%), Positives = 26/36 (72%)
 Frame = -3

Query: 532 IVHNDMLLEPGFEVLSEFHPTDEVVNSVIVARKMPP 425
           IV  + +   GF+VL+ +HP DEV+NSVIVARK  P
Sbjct: 246 IVDLEDIRRGGFDVLAVYHPDDEVINSVIVARKADP 281


>tr|B8AMH0|B8AMH0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_11242 PE=4 SV=1
          Length = 326

 Score = 42.4 bits (98), Expect = 0.015
 Identities = 20/36 (55%), Positives = 26/36 (72%)
 Frame = -3

Query: 532 IVHNDMLLEPGFEVLSEFHPTDEVVNSVIVARKMPP 425
           IV  + +   GF+VL+ +HP DEV+NSVIVARK  P
Sbjct: 246 IVDLEDIRRGGFDVLAVYHPDDEVINSVIVARKADP 281


>tr|Q70II1|Q70II1_ARAHA Putative nicotianamine synthase
           OS=Arabidopsis halleri subsp. halleri GN=nas3 PE=2 SV=1
          Length = 320

 Score = 42.0 bits (97), Expect = 0.020
 Identities = 16/25 (64%), Positives = 23/25 (92%)
 Frame = -3

Query: 502 GFEVLSEFHPTDEVVNSVIVARKMP 428
           GFEVLS +HPTD+V+NSV++++K P
Sbjct: 252 GFEVLSIYHPTDDVINSVVISKKHP 276