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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916106
Clone id YMU001_000083_C01
Library
Length 494
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000083_C01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTTTTTTGTCTTTCACCAAGAAAAGCACCCCACTATTGCTTACTTTCAATTGAAAAAACA
AGCCACACAAGAAGCAGACAAAAGGCAAAGCATCAACAGACCCCAAGTCTGCTTCACCCC
TACTTCTGTTTCTTGTAACAAGTGGTCTCTTTTGCATTACAAGGTGATGATTTGCGCAGA
TTCTCCAATTAGAAGCCTCTGCTTTATACTCCTATTGGATTGGATGAGACTGGGGCGAGA
TAGTAACTTCCCACCGTTCTATGTGAGCTGAGGGGTGTGGCAGCAGGAAAAGGCGAGCTC
TTTGACTCCACCATAATCTGAACCCAGACAACTCGAATGCACCCACCGTCTGAAGTTTCT
CCCAAGTTCTCTTCGCATTGAGTTGCTACACCCCCATGATGCTACTTTAGACTGCACAAA
GGCAATTCTCACTGTGATGACCATACCCATTATCTAAGAAAGTGACATTCAATCGACATT
CGCGGCCGCGAATG
■■Homology search results ■■ -
sp_hit_id Q2YYH4
Definition sp|Q2YYH4|URTF_STAAB Probable uridylyltransferase SAB2052c OS=Staphylococcus aureus (strain bovine RF122 / ET3-1)
Align length 40
Score (bit) 31.2
E-value 2.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916106|Adiantum capillus-veneris mRNA, clone:
YMU001_000083_C01.
         (477 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q2YYH4|URTF_STAAB Probable uridylyltransferase SAB2052c OS=St...    31   2.5  
sp|Q283Q6|DBF4B_XENLA Protein DBF4 homolog B OS=Xenopus laevis G...    31   2.5  
sp|Q8CNG6|URTF_STAES Probable uridylyltransferase SE_1761 OS=Sta...    30   4.2  
sp|Q5HM59|URTF_STAEQ Probable uridylyltransferase SERP1770 OS=St...    30   4.2  
sp|P34722|KPC1_CAEEL Protein kinase C-like 1 OS=Caenorhabditis e...    30   4.2  
sp|Q0P3N5|YCX1_OSTTA Uncharacterized protein OtCpg00170 OS=Ostre...    30   7.2  
sp|Q9PVZ9|ESR1_SPAAU Estrogen receptor OS=Sparus aurata GN=esr1 ...    30   7.2  
sp|O42132|ESR1_PAGMA Estrogen receptor OS=Pagrus major GN=esr1 P...    30   7.2  
sp|Q7A0A0|URTF_STAAW Probable uridylyltransferase MW2097 OS=Stap...    29   9.4  
sp|Q6G7E3|URTF_STAAS Probable uridylyltransferase SAS2072 OS=Sta...    29   9.4  
sp|Q7A4A4|URTF_STAAN Probable uridylyltransferase SA1974 OS=Stap...    29   9.4  
sp|Q99S95|URTF_STAAM Probable uridylyltransferase SAV2171 OS=Sta...    29   9.4  
sp|Q5HE34|URTF_STAAC Probable uridylyltransferase SACOL2161 OS=S...    29   9.4  
sp|Q2FW81|URTF_STAA8 Probable uridylyltransferase SAOUHSC_02423 ...    29   9.4  
sp|Q2FEW1|URTF_STAA3 Probable uridylyltransferase SAUSA300_2130 ...    29   9.4  
sp|Q8U2D5|AGOG_PYRFU N-glycosylase/DNA lyase OS=Pyrococcus furio...    29   9.4  

>sp|Q2YYH4|URTF_STAAB Probable uridylyltransferase SAB2052c
           OS=Staphylococcus aureus (strain bovine RF122 / ET3-1)
           GN=SAB2052c PE=3 SV=1
          Length = 395

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -3

Query: 343 GAFELSGFRLWWSQRARLFLLPHPSAHIERWEVTISPQSH 224
           G+FE+ G  L+  Q  +L  L H S H  +W + IS  +H
Sbjct: 114 GSFEIEGVSLFELQANQLKTLNHQSGHTIQWYIMISDINH 153


>sp|Q283Q6|DBF4B_XENLA Protein DBF4 homolog B OS=Xenopus laevis
           GN=dbf4b PE=1 SV=1
          Length = 784

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1

Query: 37  CLLSIEKTSHTRSRQKAKHQQTPSLL 114
           C +S+  TSH+   Q  K  QTPSLL
Sbjct: 616 CTVSVHSTSHSPPNQNVKSNQTPSLL 641


>sp|Q8CNG6|URTF_STAES Probable uridylyltransferase SE_1761
           OS=Staphylococcus epidermidis (strain ATCC 12228)
           GN=SE_1761 PE=3 SV=1
          Length = 395

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 17/59 (28%), Positives = 26/59 (44%)
 Frame = -3

Query: 343 GAFELSGFRLWWSQRARLFLLPHPSAHIERWEVTISPQSHPIQ*EYKAEASNWRICANH 167
           G+FE+ G  L+  Q  +L  L   + H   W +  S  +H    EY  +   +   ANH
Sbjct: 114 GSFEIEGTSLFELQARQLIRLKEETGHTINWYIMTSDINHKDTIEYFKQHKYFNYDANH 172


>sp|Q5HM59|URTF_STAEQ Probable uridylyltransferase SERP1770
           OS=Staphylococcus epidermidis (strain ATCC 35984 /
           RP62A) GN=SERP1770 PE=3 SV=1
          Length = 395

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 17/59 (28%), Positives = 26/59 (44%)
 Frame = -3

Query: 343 GAFELSGFRLWWSQRARLFLLPHPSAHIERWEVTISPQSHPIQ*EYKAEASNWRICANH 167
           G+FE+ G  L+  Q  +L  L   + H   W +  S  +H    EY  +   +   ANH
Sbjct: 114 GSFEIEGTSLFELQARQLIRLKEETGHTINWYIMTSDINHKDTIEYFKQHKYFNYDANH 172


>sp|P34722|KPC1_CAEEL Protein kinase C-like 1 OS=Caenorhabditis
           elegans GN=tpa-1 PE=2 SV=2
          Length = 704

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = +2

Query: 173 CADSPIRSLCFILLLDWMRLGRDSNFPPF 259
           C D PIR  CF   +DW R       PPF
Sbjct: 623 CPDGPIRQHCFFRGVDWKRFENRQVPPPF 651


>sp|Q0P3N5|YCX1_OSTTA Uncharacterized protein OtCpg00170
            OS=Ostreococcus tauri GN=OtCpg00170 PE=4 SV=1
          Length = 1260

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 4/79 (5%)
 Frame = -3

Query: 475  RLNVTFLDNGYGHHSENCLCAV*SSIMGV*QLNAKRTWEKLQTVGAFELSG----FRLWW 308
            RLN TFL     +  EN L  + +   G+  L+   +WE L      +L      F  W+
Sbjct: 1106 RLNKTFLKGCLNYRMENTLALIENPTQGLKTLSGTISWEALNKTALKDLQQRTALFTSWY 1165

Query: 307  SQRARLFLLPHPSAHIERW 251
              R    L P   +   R+
Sbjct: 1166 KSRMFCQLKPDQRSLTNRY 1184


>sp|Q9PVZ9|ESR1_SPAAU Estrogen receptor OS=Sparus aurata GN=esr1
           PE=2 SV=2
          Length = 581

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = -2

Query: 299 SSPFPAATPLSSHRTVGSYYLAPVSSN 219
           ++P PA TPL SH T G YY AP+ ++
Sbjct: 25  AAPTPAPTPLYSHSTPG-YYSAPLDAH 50


>sp|O42132|ESR1_PAGMA Estrogen receptor OS=Pagrus major GN=esr1 PE=2
           SV=1
          Length = 581

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = -2

Query: 299 SSPFPAATPLSSHRTVGSYYLAPVSSN 219
           ++P PA TPL SH T G YY AP+ ++
Sbjct: 25  AAPTPAPTPLYSHSTPG-YYSAPLDAH 50


>sp|Q7A0A0|URTF_STAAW Probable uridylyltransferase MW2097
           OS=Staphylococcus aureus (strain MW2) GN=MW2097 PE=3
           SV=1
          Length = 395

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -3

Query: 343 GAFELSGFRLWWSQRARLFLLPHPSAHIERWEVTISPQSH 224
           G+FE+ G  L+  Q  +L  L H S H  +W +  S  +H
Sbjct: 114 GSFEIEGVSLFELQANQLKTLNHQSGHTIQWYIMTSDINH 153


>sp|Q6G7E3|URTF_STAAS Probable uridylyltransferase SAS2072
           OS=Staphylococcus aureus (strain MSSA476) GN=SAS2072
           PE=3 SV=1
          Length = 395

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -3

Query: 343 GAFELSGFRLWWSQRARLFLLPHPSAHIERWEVTISPQSH 224
           G+FE+ G  L+  Q  +L  L H S H  +W +  S  +H
Sbjct: 114 GSFEIEGVSLFELQANQLKTLNHQSGHTIQWYIMTSDINH 153
tr_hit_id A5PCS9
Definition tr|A5PCS9|A5PCS9_9SPHN Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding protein OS=Erythrobacter sp. SD-21
Align length 76
Score (bit) 36.2
E-value 0.84
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916106|Adiantum capillus-veneris mRNA, clone:
YMU001_000083_C01.
         (477 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5PCS9|A5PCS9_9SPHN Aldehyde oxidase and xanthine dehydrogena...    36   0.84 
tr|A9NXK5|A9NXK5_PICSI Putative uncharacterized protein OS=Picea...    34   3.2  
tr|O62077|O62077_CAEEL Protein C25F9.1a, partially confirmed by ...    33   7.0  
tr|B5BM37|B5BM37_CAEEL Protein C25F9.1b, partially confirmed by ...    33   7.0  
tr|Q5F3U1|Q5F3U1_CHICK Putative uncharacterized protein OS=Gallu...    33   7.1  
tr|Q1RQY2|Q1RQY2_STRAM Putative serine-threonine kinase OS=Strep...    33   7.1  
tr|Q0JWG3|Q0JWG3_STRAM Putative serine-threonine kinase OS=Strep...    33   9.2  
tr|Q2UNH5|Q2UNH5_ASPOR Dimeric dihydrodiol dehydrogenase OS=Aspe...    33   9.2  
tr|B8NII3|B8NII3_ASPFL Oxidoreductase, putative OS=Aspergillus f...    33   9.2  

>tr|A5PCS9|A5PCS9_9SPHN Aldehyde oxidase and xanthine dehydrogenase,
           molybdopterin binding protein OS=Erythrobacter sp. SD-21
           GN=ED21_22873 PE=4 SV=1
          Length = 763

 Score = 36.2 bits (82), Expect = 0.84
 Identities = 22/76 (28%), Positives = 33/76 (43%)
 Frame = -3

Query: 319 RLWWSQRARLFLLPHPSAHIERWEVTISPQSHPIQ*EYKAEASNWRICANHHLVMQKRPL 140
           +L WS+   L ++P  +  +     TI PQ  P+    +  A +W     H L     P 
Sbjct: 457 QLTWSRAQDLQMVPPRAPVLGEISATIGPQGQPVAWRARITAPSWMRETGHRLFDNYVPE 516

Query: 139 VTRNRSRGEADLGSVD 92
             R  S GEAD  +V+
Sbjct: 517 AARRESVGEADPFAVE 532


>tr|A9NXK5|A9NXK5_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 193

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 17/41 (41%), Positives = 26/41 (63%)
 Frame = -3

Query: 253 WEVTISPQSHPIQ*EYKAEASNWRICANHHLVMQKRPLVTR 131
           W  +ISPQ+ P+Q   K+ A+N R C + H++ QK+   TR
Sbjct: 7   WHSSISPQNLPLQ-TAKSTAANTRKCPSFHILAQKKVQKTR 46


>tr|O62077|O62077_CAEEL Protein C25F9.1a, partially confirmed by
           transcript evidence OS=Caenorhabditis elegans GN=srw-85
           PE=2 SV=2
          Length = 431

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = -1

Query: 138 LQETEVGVKQTWGLLMLCLLSASCVACFFN*K*AIVGCFSW 16
           +++T +  K  W L +L +L +S + CFFN K  IV    W
Sbjct: 132 IRKTFLSPKDCWKLFILLILISSLITCFFNLKLEIVPSTKW 172


>tr|B5BM37|B5BM37_CAEEL Protein C25F9.1b, partially confirmed by
           transcript evidence OS=Caenorhabditis elegans GN=srw-85
           PE=4 SV=1
          Length = 349

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = -1

Query: 138 LQETEVGVKQTWGLLMLCLLSASCVACFFN*K*AIVGCFSW 16
           +++T +  K  W L +L +L +S + CFFN K  IV    W
Sbjct: 50  IRKTFLSPKDCWKLFILLILISSLITCFFNLKLEIVPSTKW 90


>tr|Q5F3U1|Q5F3U1_CHICK Putative uncharacterized protein OS=Gallus
           gallus GN=RCJMB04_7c5 PE=2 SV=1
          Length = 956

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = +3

Query: 18  KKSTPLLLT-FN*KNKPHKKQT-KGKASTDPKSASPLLLFLVTSGLFC 155
           KKS+PLL T       P KK T +GKAS  PK +SP  L  +T    C
Sbjct: 470 KKSSPLLTTPLKSPFHPRKKNTHRGKASVTPKRSSPKGLVQITKHRLC 517


>tr|Q1RQY2|Q1RQY2_STRAM Putative serine-threonine kinase
           OS=Streptomyces ambofaciens ATCC 23877 GN=SAMT0103 PE=4
           SV=1
          Length = 533

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = -2

Query: 389 VATQCEENLGETSDGGCIRVVWVQIMVESKSSPFPAATPLSSHRTVGSYYLAP 231
           V   C E LG  +D G    VW ++     S P P  TP+       +  L P
Sbjct: 266 VVEWCRERLGADADAGAGPAVWREVTGPEASVPDPVGTPVDPSTAASTLLLGP 318


>tr|Q0JWG3|Q0JWG3_STRAM Putative serine-threonine kinase
           OS=Streptomyces ambofaciens GN=DSMT0122 PE=4 SV=1
          Length = 533

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = -2

Query: 389 VATQCEENLGETSDGGCIRVVWVQIMVESKSSPFPAATPLSSHRTVGSYYLAP 231
           V   C E LG  +D G    VW ++     S P P  TP+       +  L P
Sbjct: 266 VVEWCRERLGADADAGAGPAVWREVTGPEASVPDPVRTPVDPSTAASTLLLGP 318


>tr|Q2UNH5|Q2UNH5_ASPOR Dimeric dihydrodiol dehydrogenase
           OS=Aspergillus oryzae GN=AO090001000365 PE=4 SV=1
          Length = 370

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 7/67 (10%)
 Frame = -3

Query: 472 LNVTFLDNGYGHHSENCLCA-------V*SSIMGV*QLNAKRTWEKLQTVGAFELSGFRL 314
           ++V F+   + HH +N L A       V    + V    AK+ +E  +    F + G+ L
Sbjct: 75  IDVVFIATPHSHHFQNALLALEAGNHVVCQKSLTVNAAQAKKLFETAKREQLFLMEGWWL 134

Query: 313 WWSQRAR 293
           WW Q +R
Sbjct: 135 WWPQASR 141


>tr|B8NII3|B8NII3_ASPFL Oxidoreductase, putative OS=Aspergillus
           flavus NRRL3357 GN=AFLA_067700 PE=4 SV=1
          Length = 378

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 7/67 (10%)
 Frame = -3

Query: 472 LNVTFLDNGYGHHSENCLCA-------V*SSIMGV*QLNAKRTWEKLQTVGAFELSGFRL 314
           ++V F+   + HH +N L A       V    + V    AK+ +E  +    F + G+ L
Sbjct: 83  IDVVFIATPHSHHFQNALLALEAGNHVVCQKSLTVNAAQAKKLFETAKREQLFLMEGWWL 142

Query: 313 WWSQRAR 293
           WW Q +R
Sbjct: 143 WWPQASR 149