BP916105 |
Clone id |
YMU001_000083_B12 |
Library |
YMU01 |
Length |
455 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000083_B12. |
Accession |
BP916105 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2842Contig1 |
Sequence |
AGATATACTTAATATCGTGGCTTGTGAGGGGCATGAAAGGGTAGAGAGGCCTGAGACTTA CAGGCAATGGCAGGCCCGCTTCCAAAGGGCTGGGTTTGAGCCTTTTACACTTAATCGGTC TGTGTTGAAGAAGGCAAGGAATGTGGTGAAGGCTTTCTATCACAAGGATTTCTCTGTTGA TGATGATTCTAAATGGATGCTCCTAGGGTGGAAGGGTCGTATAATGGAGGGGCTTTCGGC ATGGAAGCGCTCTTCCCCTGGTCTTGGTGTCTAAGTCCACAGTTGCCCAGTCCCTTTGGG ACTAGTGGTTTATAAAAAATTGTTGATTTCTGGATGTGGCAGAATGTTTACGCCTTTGGA AGCCCAATGTCTGTATATCAGTAATTTGAAGGTTTTATGCAGAACAGGGGGCAAACTGTG CGAGGTCATTGTGGCGCTAGCGAAGTTGTGTCTTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SNB8 |
Definition |
sp|Q9SNB8|SCL30_ARATH Scarecrow-like protein 30 OS=Arabidopsis thaliana |
Align length |
82 |
Score (bit) |
107.0 |
E-value |
2.0e-23 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A3E2G2 |
Definition |
tr|A3E2G2|A3E2G2_PINRA SCARECROW-like protein 1 OS=Pinus radiata |
Align length |
85 |
Score (bit) |
126.0 |
E-value |
6.0e-28 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916105|Adiantum capillus-veneris mRNA, clone: YMU001_000083_B12. (455 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A3E2G2|A3E2G2_PINRA SCARECROW-like protein 1 OS=Pinus radiata... 126 6e-28 tr|Q7XLZ1|Q7XLZ1_ORYSJ Os04g0590400 protein OS=Oryza sativa subs... 116 5e-25 tr|Q7X9T5|Q7X9T5_LILLO SCARECROW-like protein OS=Lilium longiflo... 116 5e-25 tr|A2XWZ6|A2XWZ6_ORYSI Putative uncharacterized protein OS=Oryza... 116 5e-25 tr|A7PNN8|A7PNN8_VITVI Chromosome chr8 scaffold_23, whole genome... 114 3e-24 tr|Q00LP5|Q00LP5_SOLLC GRAS4 OS=Solanum lycopersicum GN=GRAS4 PE... 113 4e-24 tr|Q1PCS0|Q1PCS0_TOBAC GRAS1 OS=Nicotiana tabacum PE=2 SV=1 112 7e-24 tr|B7ZYK9|B7ZYK9_MAIZE Putative uncharacterized protein OS=Zea m... 112 1e-23 tr|B6U6Z6|B6U6Z6_MAIZE SCARECROW-like protein OS=Zea mays PE=2 SV=1 112 1e-23 tr|Q6AVK7|Q6AVK7_ORYSJ Os03g0690600 protein OS=Oryza sativa subs... 111 2e-23 tr|Q2XUT7|Q2XUT7_CAPAN GRAS transcription factor (Fragment) OS=C... 111 2e-23 tr|B4FKC4|B4FKC4_MAIZE Putative uncharacterized protein OS=Zea m... 110 3e-23 tr|A7NYY0|A7NYY0_VITVI Chromosome chr6 scaffold_3, whole genome ... 110 3e-23 tr|A7PIS9|A7PIS9_VITVI Chromosome chr13 scaffold_17, whole genom... 110 3e-23 tr|A5BUL5|A5BUL5_VITVI Putative uncharacterized protein OS=Vitis... 110 3e-23 tr|A2XKV4|A2XKV4_ORYSI Putative uncharacterized protein OS=Oryza... 110 3e-23 tr|A7PIT1|A7PIT1_VITVI Chromosome chr13 scaffold_17, whole genom... 109 8e-23 tr|Q5N9X3|Q5N9X3_ORYSJ SCARECROW-like protein (Putative uncharac... 108 1e-22 tr|B8AC15|B8AC15_ORYSI Putative uncharacterized protein OS=Oryza... 108 1e-22 tr|A7PIT4|A7PIT4_VITVI Chromosome chr13 scaffold_17, whole genom... 108 1e-22 tr|A5BV87|A5BV87_VITVI Putative uncharacterized protein OS=Vitis... 108 1e-22 tr|A7NYX9|A7NYX9_VITVI Chromosome chr6 scaffold_3, whole genome ... 108 2e-22 tr|Q2QNA3|Q2QNA3_ORYSJ Os12g0573200 protein OS=Oryza sativa subs... 107 2e-22 tr|A2ZLX0|A2ZLX0_ORYSI Putative uncharacterized protein OS=Oryza... 107 2e-22 tr|Q3EAP0|Q3EAP0_ARATH Uncharacterized protein At3g46600.2 OS=Ar... 107 3e-22 tr|A8MS63|A8MS63_ARATH Uncharacterized protein At3g46600.3 OS=Ar... 107 3e-22 tr|A7PIT0|A7PIT0_VITVI Chromosome chr13 scaffold_17, whole genom... 107 4e-22 tr|A5BUL4|A5BUL4_VITVI Putative uncharacterized protein OS=Vitis... 107 4e-22 tr|A5BUL3|A5BUL3_VITVI Putative uncharacterized protein OS=Vitis... 107 4e-22 tr|Q94HJ4|Q94HJ4_ORYSA Putative SCARECROW gene regulator OS=Oryz... 105 9e-22
>tr|A3E2G2|A3E2G2_PINRA SCARECROW-like protein 1 OS=Pinus radiata GN=SCL1 PE=2 SV=1 Length = 810
Score = 126 bits (316), Expect = 6e-28 Identities = 55/85 (64%), Positives = 67/85 (78%) Frame = +2
Query: 2 DILNIVACEGHERVERPETYRQWQARFQRAGFEPFTLNRSVLKKARNVVKAFYHKDFSVD 181 +ILN+VACEG ER+ERPETY+QWQ R QRAGF L+RS+L K+R+ VK FYHKDF VD Sbjct: 726 EILNVVACEGSERLERPETYKQWQGRTQRAGFVQLPLDRSILSKSRDKVKTFYHKDFGVD 785
Query: 182 DDSKWMLLGWKGRIMEGLSAWKRSS 256 +D WMLLGWKGR + LS W+ S+ Sbjct: 786 EDGNWMLLGWKGRTIHALSTWRPST 810
>tr|Q7XLZ1|Q7XLZ1_ORYSJ Os04g0590400 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0086O06.18 PE=4 SV=2 Length = 636
Score = 116 bits (291), Expect = 5e-25 Identities = 53/82 (64%), Positives = 64/82 (78%) Frame = +2
Query: 2 DILNIVACEGHERVERPETYRQWQARFQRAGFEPFTLNRSVLKKARNVVKAFYHKDFSVD 181 + LN+VACEG ERVERPETY+QWQ R RAGF+ LN+ +KKAR VK YH+DF VD Sbjct: 553 EALNVVACEGTERVERPETYKQWQVRNIRAGFKQLPLNQETVKKARYKVKKSYHRDFLVD 612
Query: 182 DDSKWMLLGWKGRIMEGLSAWK 247 +D+KWML GWKGRI+ LSAW+ Sbjct: 613 EDNKWMLQGWKGRIIFALSAWE 634
>tr|Q7X9T5|Q7X9T5_LILLO SCARECROW-like protein OS=Lilium longiflorum GN=LlSCL PE=2 SV=1 Length = 748
Score = 116 bits (291), Expect = 5e-25 Identities = 51/85 (60%), Positives = 65/85 (76%) Frame = +2
Query: 2 DILNIVACEGHERVERPETYRQWQARFQRAGFEPFTLNRSVLKKARNVVKAFYHKDFSVD 181 D +N++ACEG ERVERPETY+QWQ R RAGF L+R ++KK++ VK YHKDF VD Sbjct: 663 DAMNVIACEGTERVERPETYKQWQVRNFRAGFTQLPLDRDIVKKSKCKVKELYHKDFVVD 722
Query: 182 DDSKWMLLGWKGRIMEGLSAWKRSS 256 +D +W+LLGWKGRI+ LSAW +S Sbjct: 723 EDGRWLLLGWKGRIIYALSAWTPNS 747
>tr|A2XWZ6|A2XWZ6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_17188 PE=4 SV=1 Length = 636
Score = 116 bits (291), Expect = 5e-25 Identities = 53/82 (64%), Positives = 64/82 (78%) Frame = +2
Query: 2 DILNIVACEGHERVERPETYRQWQARFQRAGFEPFTLNRSVLKKARNVVKAFYHKDFSVD 181 + LN+VACEG ERVERPETY+QWQ R RAGF+ LN+ +KKAR VK YH+DF VD Sbjct: 553 EALNVVACEGTERVERPETYKQWQVRNIRAGFKQLPLNQETVKKARYKVKKSYHRDFLVD 612
Query: 182 DDSKWMLLGWKGRIMEGLSAWK 247 +D+KWML GWKGRI+ LSAW+ Sbjct: 613 EDNKWMLQGWKGRIIFALSAWE 634
>tr|A7PNN8|A7PNN8_VITVI Chromosome chr8 scaffold_23, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021332001 PE=4 SV=1 Length = 743
Score = 114 bits (284), Expect = 3e-24 Identities = 51/82 (62%), Positives = 61/82 (74%) Frame = +2
Query: 2 DILNIVACEGHERVERPETYRQWQARFQRAGFEPFTLNRSVLKKARNVVKAFYHKDFSVD 181 + LN++ACEG ERVERPETY+QWQ R RAGF LNR +K+A V YHKDF +D Sbjct: 660 EALNVIACEGWERVERPETYKQWQLRNLRAGFVQLPLNRETMKRATERVTTNYHKDFVID 719
Query: 182 DDSKWMLLGWKGRIMEGLSAWK 247 +DS+WML GWKGRI+ LSAWK Sbjct: 720 EDSQWMLQGWKGRIIYALSAWK 741
>tr|Q00LP5|Q00LP5_SOLLC GRAS4 OS=Solanum lycopersicum GN=GRAS4 PE=2 SV=1 Length = 666
Score = 113 bits (283), Expect = 4e-24 Identities = 48/82 (58%), Positives = 63/82 (76%) Frame = +2
Query: 2 DILNIVACEGHERVERPETYRQWQARFQRAGFEPFTLNRSVLKKARNVVKAFYHKDFSVD 181 D +N++ACEG ERVERPETY+QWQ R RAGF+ L++ ++K RN V++ YH+DFSVD Sbjct: 576 DAMNVIACEGTERVERPETYKQWQLRCVRAGFKQVPLDQEIVKIVRNKVRSEYHRDFSVD 635
Query: 182 DDSKWMLLGWKGRIMEGLSAWK 247 +D WML GWKGR++ LS WK Sbjct: 636 EDGHWMLQGWKGRVIYALSCWK 657
>tr|Q1PCS0|Q1PCS0_TOBAC GRAS1 OS=Nicotiana tabacum PE=2 SV=1 Length = 644
Score = 112 bits (281), Expect = 7e-24 Identities = 48/82 (58%), Positives = 62/82 (75%) Frame = +2
Query: 2 DILNIVACEGHERVERPETYRQWQARFQRAGFEPFTLNRSVLKKARNVVKAFYHKDFSVD 181 D +N++ACEG ERVERPETY+QWQ R RAGF+ L++ ++ N V+ YHKDFSVD Sbjct: 558 DAMNVIACEGTERVERPETYKQWQLRCARAGFKQLPLDQEIVNFVSNKVRREYHKDFSVD 617
Query: 182 DDSKWMLLGWKGRIMEGLSAWK 247 +DS+WML GWKGR++ LS WK Sbjct: 618 EDSQWMLQGWKGRVVYALSCWK 639
>tr|B7ZYK9|B7ZYK9_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 809
Score = 112 bits (279), Expect = 1e-23 Identities = 45/82 (54%), Positives = 65/82 (79%) Frame = +2
Query: 2 DILNIVACEGHERVERPETYRQWQARFQRAGFEPFTLNRSVLKKARNVVKAFYHKDFSVD 181 + +N+++CEG ER+ERPETY+QWQ R+QRAGF +N+ ++K+AR V+ YHKDF +D Sbjct: 723 EAINVISCEGLERMERPETYKQWQVRYQRAGFRQLPINQDIMKRAREKVRC-YHKDFLID 781
Query: 182 DDSKWMLLGWKGRIMEGLSAWK 247 +D++W+L GWKGRI+ LS WK Sbjct: 782 EDNRWLLQGWKGRIVLALSTWK 803
>tr|B6U6Z6|B6U6Z6_MAIZE SCARECROW-like protein OS=Zea mays PE=2 SV=1 Length = 809
Score = 112 bits (279), Expect = 1e-23 Identities = 45/82 (54%), Positives = 65/82 (79%) Frame = +2
Query: 2 DILNIVACEGHERVERPETYRQWQARFQRAGFEPFTLNRSVLKKARNVVKAFYHKDFSVD 181 + +N+++CEG ER+ERPETY+QWQ R+QRAGF +N+ ++K+AR V+ YHKDF +D Sbjct: 723 EAINVISCEGLERMERPETYKQWQVRYQRAGFRQLPMNQDIMKRAREKVRC-YHKDFLID 781
Query: 182 DDSKWMLLGWKGRIMEGLSAWK 247 +D++W+L GWKGRI+ LS WK Sbjct: 782 EDNRWLLQGWKGRIVLALSTWK 803
>tr|Q6AVK7|Q6AVK7_ORYSJ Os03g0690600 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0022C08.1 PE=2 SV=1 Length = 731
Score = 111 bits (278), Expect = 2e-23 Identities = 47/82 (57%), Positives = 63/82 (76%) Frame = +2
Query: 2 DILNIVACEGHERVERPETYRQWQARFQRAGFEPFTLNRSVLKKARNVVKAFYHKDFSVD 181 + LN++ACEG +RVERPETY+QWQ R RAGF LN+ ++ KA++ VK YHKDF +D Sbjct: 646 EALNVIACEGSDRVERPETYKQWQVRNLRAGFVQSPLNQDIVLKAKDKVKDIYHKDFVID 705
Query: 182 DDSKWMLLGWKGRIMEGLSAWK 247 +DS+W+L GWKGRI+ +S WK Sbjct: 706 EDSEWLLQGWKGRIIYAISTWK 727
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