BP916042
Clone id YMU001_000082_D03
Library
Length 394
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000082_D03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
ATCACCATATTCATACAAAACGCCCAACCTTTTGCTGGCCTATCTGAACCTGTCCAAGAA
ATCCTCAAGAGTCCTATATGAAAAGTGTGAGGGTTGATCGTGCAGCGATCGGGCTGACAT
ATAGAAAATTAGCCATAAAACCAGAAAATACATCTGAGCTAGACAAATAACAGAAGCCGC
AGCAAACTGACCGATTACATGCTGAAGCAGCCACCGAGCTGTCCGCCCACAAACTGCTGC
CTCGATAAGCCGAATCACCAAAGCCTGCCATTTCATGCCTTTAACCAGGTTGCCACTTCT
GGTCACAGCTCCAAGCCCCCAATAGTTTCTCTCCAAGATGGTTACCCAGCATGCGATCAT
GTAGATGCAATATGCAACACTATCGAATAAGTAG
■■Homology search results ■■ -
sp_hit_id Q86KH4
Definition sp|Q86KH4|Y8830_DICDI Putative uncharacterized protein DDB_G0272516 OS=Dictyostelium discoideum
Align length 65
Score (bit) 34.3
E-value 0.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916042|Adiantum capillus-veneris mRNA, clone:
YMU001_000082_D03.
(394 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q86KH4|Y8830_DICDI Putative uncharacterized protein DDB_G0272... 34 0.20
sp|Q8IUH5|ZDH17_HUMAN Palmitoyltransferase ZDHHC17 OS=Homo sapie... 30 3.7
sp|A6NKX4|S22AX_HUMAN Putative solute carrier family 22 member E... 30 3.7
sp|Q8TER5|SOLO_HUMAN Protein SOLO OS=Homo sapiens GN=SOLO PE=1 SV=2 30 4.9
sp|Q872I5|INO80_NEUCR Putative DNA helicase ino-80 OS=Neurospora... 29 6.4
sp|Q80TN5|ZDH17_MOUSE Palmitoyltransferase ZDHHC17 OS=Mus muscul... 29 8.3
sp|Q86ZK8|SEC24_PODAN Protein transport protein SEC24 OS=Podospo... 29 8.3
sp|P51129|RXRG_XENLA Retinoic acid receptor RXR-gamma OS=Xenopus... 29 8.3
sp|P70268|PKN1_MOUSE Serine/threonine-protein kinase N1 OS=Mus m... 29 8.3
sp|P53755|BSC5_YEAST Bypass of stop codon protein 5 OS=Saccharom... 29 8.3

>sp|Q86KH4|Y8830_DICDI Putative uncharacterized protein DDB_G0272516
OS=Dictyostelium discoideum GN=DDB_G0272516 PE=4 SV=2
Length = 465

Score = 34.3 bits (77), Expect = 0.20
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +1

Query: 139 NQKIHLS*TNN-RSRSKLTDYMLKQPPSCPP-TNCCLDKPNHQSLPFHAF-NQVATSGHS 309
N I+++ NN + + + + QP C P +NC N Q+ P H + N T GH+
Sbjct: 353 NNNININNNNNINNNNNINNNSNNQPNCCSPNSNCQYYGYNQQNPPKHQYPNNFLTDGHN 412

Query: 310 SKPPI 324
PPI
Sbjct: 413 PSPPI 417


>sp|Q8IUH5|ZDH17_HUMAN Palmitoyltransferase ZDHHC17 OS=Homo sapiens
GN=ZDHHC17 PE=1 SV=2
Length = 632

Score = 30.0 bits (66), Expect = 3.7
Identities = 20/82 (24%), Positives = 34/82 (41%)
Frame = -2

Query: 393 YLFDSVAYCIYMIACWVTILERNYWGLGAVTRSGNLVKGMKWQALVIRLIEAAVCGRTAR 214
Y + + ++MI CW+ +YWGL T K W + + A C
Sbjct: 481 YFMGYLFFLLFMI-CWMIYGCISYWGLHCET---TYTKDGFWTYIT----QIATCSPWMF 532

Query: 213 WLLQHVIGQFAAASVICLAQMY 148
W+ + + F +V+ + QMY
Sbjct: 533 WMFLNSVFHFMWVAVLLMCQMY 554


>sp|A6NKX4|S22AX_HUMAN Putative solute carrier family 22 member
ENSG00000182157 OS=Homo sapiens PE=3 SV=3
Length = 558

Score = 30.0 bits (66), Expect = 3.7
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = -2

Query: 288 LVKGMKWQALVIRLIEAAVCGRTARWLLQHVIGQFAAASVICLAQMYFLVLWLIFYMSAR 109
L G++ ALV L+ A CGR LL ++ AS++ LA +L W + ++S
Sbjct: 375 LEAGLEAAALVFLLLTADCCGRRPVLLLGTMV--TGLASLLLLAGAQYLPGWTVLFLSVL 432

Query: 108 SL 103
L
Sbjct: 433 GL 434


>sp|Q8TER5|SOLO_HUMAN Protein SOLO OS=Homo sapiens GN=SOLO PE=1 SV=2
Length = 1519

Score = 29.6 bits (65), Expect = 4.9
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Frame = +3

Query: 231 KLLPR*AESPKPAISCL*PGCHFWSQLQAPNS-----FSPRWLPSMRSCR 365
+++P A++P+ A+ CL PG ++ PN F+P WL + R
Sbjct: 108 QVVPSAAQAPRLALKCLAPGGGRVQEVPVPNEACAYLFTPEWLQGINKDR 157


>sp|Q872I5|INO80_NEUCR Putative DNA helicase ino-80 OS=Neurospora
crassa GN=ino-80 PE=3 SV=3
Length = 1997

Score = 29.3 bits (64), Expect = 6.4
Identities = 23/64 (35%), Positives = 26/64 (40%), Gaps = 6/64 (9%)
Frame = +1

Query: 163 TNNRSRSKLTDYMLKQPPSCPPT--NCCLDKP----NHQSLPFHAFNQVATSGHSSKPPI 324
TNN + + QPP PPT L+ P HQ H VA S S PP
Sbjct: 142 TNNNNALGAAGSLSSQPPPPPPTGPRSILNPPTPSQQHQQQHHHPNPFVAASAPSLPPPP 201

Query: 325 VSLQ 336
SLQ
Sbjct: 202 SSLQ 205


>sp|Q80TN5|ZDH17_MOUSE Palmitoyltransferase ZDHHC17 OS=Mus musculus
GN=Zdhhc17 PE=1 SV=2
Length = 632

Score = 28.9 bits (63), Expect = 8.3
Identities = 19/82 (23%), Positives = 34/82 (41%)
Frame = -2

Query: 393 YLFDSVAYCIYMIACWVTILERNYWGLGAVTRSGNLVKGMKWQALVIRLIEAAVCGRTAR 214
Y + + ++MI CW+ +YWGL T K W + + A C
Sbjct: 481 YFMGYLFFLLFMI-CWMIYGCVSYWGLHCET---TYTKDGFWTYIT----QIATCSPWMF 532

Query: 213 WLLQHVIGQFAAASVICLAQMY 148
W+ + + F +V+ + Q+Y
Sbjct: 533 WMFLNSVFHFLWVAVLLMCQLY 554


>sp|Q86ZK8|SEC24_PODAN Protein transport protein SEC24 OS=Podospora
anserina GN=SEC24 PE=3 SV=1
Length = 946

Score = 28.9 bits (63), Expect = 8.3
Identities = 27/115 (23%), Positives = 46/115 (40%), Gaps = 1/115 (0%)
Frame = -2

Query: 369 CIYMIACWVTILERNY-WGLGAVTRSGNLVKGMKWQALVIRLIEAAVCGRTARWLLQHVI 193
C I +VT L+ + W + ++ + W A + ++ R R L H +
Sbjct: 273 CRSYINPFVTFLDHGHRWRCNMCNLTNDVPQAFDWDAAAQKSVD-----RWQRHELNHAV 327

Query: 192 GQFAAASVICLAQMYFLVLWLIFYMSARSLHDQPSHFSYRTLEDFLDRFR*ASKR 28
+F A + LV +F +S S+ + RT+E LDR A +R
Sbjct: 328 VEFVAPQEYMVRPPQPLVYLFLFDVSYASVSSGLLATAARTIEASLDRIPNADRR 382


>sp|P51129|RXRG_XENLA Retinoic acid receptor RXR-gamma OS=Xenopus
laevis GN=rxrg PE=2 SV=1
Length = 470

Score = 28.9 bits (63), Expect = 8.3
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1

Query: 214 PSCPPTNCCLDKPNHQSLPFHAFNQVATSGHSSKPPIVS 330
P P+ L+ P H+S PF+ N V+ S PP +S
Sbjct: 85 PHSLPSPTILNYPGHESPPFNILNNVSCSEDIKPPPGLS 123


>sp|P70268|PKN1_MOUSE Serine/threonine-protein kinase N1 OS=Mus
musculus GN=Pkn1 PE=1 SV=3
Length = 946

Score = 28.9 bits (63), Expect = 8.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1

Query: 205 KQPPSCPPTNCCLDKPNHQS 264
K PP P T+C L P H+S
Sbjct: 568 KSPPGLPSTSCSLSSPTHES 587


>sp|P53755|BSC5_YEAST Bypass of stop codon protein 5
OS=Saccharomyces cerevisiae GN=BSC5 PE=1 SV=1
Length = 489

Score = 28.9 bits (63), Expect = 8.3
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1

Query: 274 EMAGFGDSAYRGSSLWADSSVAASACNRSV 185
E G+G + RGSSLW + S + S N S+
Sbjct: 349 ESLGYGRLSERGSSLWLNDSSSGSLINYSI 378


tr_hit_id A9S6L5
Definition tr|A9S6L5|A9S6L5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 117
Score (bit) 127.0
E-value 4.0e-28
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916042|Adiantum capillus-veneris mRNA, clone:
YMU001_000082_D03.
(394 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9S6L5|A9S6L5_PHYPA Predicted protein OS=Physcomitrella paten... 127 4e-28
tr|A7PT51|A7PT51_VITVI Chromosome chr8 scaffold_29, whole genome... 70 7e-11
tr|A5AUN8|A5AUN8_VITVI Putative uncharacterized protein OS=Vitis... 70 7e-11
tr|B6U027|B6U027_MAIZE Putative uncharacterized protein OS=Zea m... 57 6e-07
tr|A2Z8K2|A2Z8K2_ORYSI Putative uncharacterized protein OS=Oryza... 54 4e-06
tr|Q7XDC6|Q7XDC6_ORYSJ Os10g0478400 protein OS=Oryza sativa subs... 54 5e-06
tr|Q9FWH4|Q9FWH4_ORYSA Putative uncharacterized protein OSJNBa00... 51 3e-05
tr|A9P252|A9P252_PICSI Putative uncharacterized protein OS=Picea... 42 0.012
tr|B8LMV5|B8LMV5_PICSI Putative uncharacterized protein OS=Picea... 35 2.4
tr|A4HSS2|A4HSS2_LEIIN Pteridine transporter, putative OS=Leishm... 35 2.4
tr|O48574|O48574_ARATH T19K24.3 protein (Putative uncharacterize... 34 3.2
tr|Q9SF17|Q9SF17_ARATH F26K24.10 protein OS=Arabidopsis thaliana... 34 4.1
tr|Q4QJ48|Q4QJ48_LEIMA Pteridine transporter, putative OS=Leishm... 34 4.1
tr|B6KP81|B6KP81_TOXGO ATP-dependent DNA helicase, putative OS=T... 34 4.1
tr|A9G3N2|A9G3N2_9RHOB Putative uncharacterized protein OS=Phaeo... 33 5.4
tr|Q3EBL4|Q3EBL4_ARATH Uncharacterized protein At2g37035.1 OS=Ar... 33 5.4
tr|B7QWG3|B7QWG3_9RHOB Integral membrane protein DUF6 OS=Ruegeri... 33 7.1
tr|B2WKH2|B2WKH2_PYRTR Putative uncharacterized protein OS=Pyren... 33 9.2

>tr|A9S6L5|A9S6L5_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_163120 PE=4 SV=1
Length = 488

Score = 127 bits (318), Expect = 4e-28
Identities = 54/117 (46%), Positives = 78/117 (66%)
Frame = -2

Query: 393 YLFDSVAYCIYMIACWVTILERNYWGLGAVTRSGNLVKGMKWQALVIRLIEAAVCGRTAR 214
Y+ + CIY++ACWVTI+ER YWG A++R LV M+ Q L ++L+E+ +CGR+AR
Sbjct: 372 YMLEGAISCIYVMACWVTIMERQYWGFSALSRGWKLVSNMQHQVLAVKLLESILCGRSAR 431

Query: 213 WLLQHVIGQFAAASVICLAQMYFLVLWLIFYMSARSLHDQPSHFSYRTLEDFLDRFR 43
W+L +G F + V+ + Q+YF++ WL+ Y+SAR D FS LEDFLDR R
Sbjct: 432 WVLSQFMGPFLSMLVVSVGQLYFIICWLVLYLSARCKLDTNPRFSLGVLEDFLDRVR 488


>tr|A7PT51|A7PT51_VITVI Chromosome chr8 scaffold_29, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00023214001
PE=4 SV=1
Length = 461

Score = 69.7 bits (169), Expect = 7e-11
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = -2

Query: 393 YLFDSVAYCIYMIACWVTILERNYWGLGAVTRSGNLVKGMKWQALVIRLIEAAVCGRTAR 214
+L+D++ I+ + WV I++ G V L+ M QA+ I+ +EA CG R
Sbjct: 343 FLWDTLVSFIFAVDAWVAIVDTRRSGRDIVREGVYLLSTMLNQAIQIKCLEAIFCGSFVR 402

Query: 213 WLLQHVIGQFAAASVICLAQMYFLVLWLIFYMSARS--LHDQPSHFSYRTLEDFLDRFR 43
W L G+ AA + ++YF+V WLIFY +AR + F R LE F++ R
Sbjct: 403 WALARFCGKLFAAVFQSVVEVYFMVAWLIFYFAARCRVASTEGRRFGRRELEGFIEGLR 461


>tr|A5AUN8|A5AUN8_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_033047 PE=4 SV=1
Length = 471

Score = 69.7 bits (169), Expect = 7e-11
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = -2

Query: 393 YLFDSVAYCIYMIACWVTILERNYWGLGAVTRSGNLVKGMKWQALVIRLIEAAVCGRTAR 214
+L+D++ I+ + WV I++ G V L+ M QA+ I+ +EA CG R
Sbjct: 353 FLWDTLVSFIFAVDAWVAIVDTRRSGRDIVREGVYLLSTMLNQAIQIKCLEAIFCGSFVR 412

Query: 213 WLLQHVIGQFAAASVICLAQMYFLVLWLIFYMSARS--LHDQPSHFSYRTLEDFLDRFR 43
W L G+ AA + ++YF+V WLIFY +AR + F R LE F++ R
Sbjct: 413 WALARFCGKLFAAVFQSVVEVYFMVAWLIFYFAARCRVASTEGRRFGRRELEGFIEGLR 471


>tr|B6U027|B6U027_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 173

Score = 56.6 bits (135), Expect = 6e-07
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Frame = -2

Query: 390 LFDSVAYCIYMIACWVTILERNYW--GLGAVTRSGNLVKGMKWQALVIRLIEAAVCGRTA 217
+FD+V ++ + WV +++R+ G AV LV M A +++ E VCG
Sbjct: 54 VFDAVVSVLFTVVPWVVVMDRDPRPPGRNAVKEGCYLVSLMATDATMLKCWETVVCGSMG 113

Query: 216 RWLLQHVIGQFAAASVICLAQMYFLVLWLIFYMSAR 109
R ++ G+ + +AQ+YF+V+WL+FY +AR
Sbjct: 114 RLIMVTFGGKVFGGFLHSIAQVYFMVVWLLFYFAAR 149


>tr|A2Z8K2|A2Z8K2_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_34039 PE=4 SV=1
Length = 331

Score = 53.9 bits (128), Expect = 4e-06
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Frame = -2

Query: 390 LFDSVAYCIYMIACWVTILERNYW--GLGAVTRSGNLVKGMKWQALVIRLIEAAVCGRTA 217
L D+V ++ + WV +++R+ G AV LV M A +I+ + VCG
Sbjct: 211 LLDAVVSVLFTVVPWVVVMDRDPRPPGRNAVKEGCYLVSLMATDATLIKCWQTVVCGSMG 270

Query: 216 RWLLQHVIGQFAAASVICLAQMYFLVLWLIFYMSAR--SLHDQPSHFSYRTLEDFLDRFR 43
+ + + G+ + + ++YF+V+WL+FY SAR + HF + LD FR
Sbjct: 271 QLAMVTLGGKVLGGFLHSIGEVYFMVVWLMFYFSARCKEVRLGGRHFGLEDVAAALDGFR 330


>tr|Q7XDC6|Q7XDC6_ORYSJ Os10g0478400 protein OS=Oryza sativa subsp.
japonica GN=Os10g0478400 PE=4 SV=2
Length = 457

Score = 53.5 bits (127), Expect = 5e-06
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Frame = -2

Query: 390 LFDSVAYCIYMIACWVTILERNYW--GLGAVTRSGNLVKGMKWQALVIRLIEAAVCGRTA 217
L D+V ++ + WV +++R+ G AV LV M A +I+ + VCG
Sbjct: 337 LLDAVVSVLFTVVPWVIVMDRDPRPPGRNAVKEGCYLVSLMATDATLIKCWQTVVCGSMG 396

Query: 216 RWLLQHVIGQFAAASVICLAQMYFLVLWLIFYMSAR--SLHDQPSHFSYRTLEDFLDRFR 43
+ + + G+ + + ++YF+V+WL+FY SAR + HF + LD FR
Sbjct: 397 QLAMVTLGGKVLGGFLHSIGEVYFMVVWLMFYFSARCKEVRLGGRHFGLEDVAAALDGFR 456


>tr|Q9FWH4|Q9FWH4_ORYSA Putative uncharacterized protein
OSJNBa0055P24.5 OS=Oryza sativa GN=OSJNBa0055P24.5 PE=4
SV=1
Length = 460

Score = 51.2 bits (121), Expect = 3e-05
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Frame = -2

Query: 390 LFDSVAYCIYMIACWVTILERNYW--GLGAVTRSGNLVKGMKWQALVIRLIEAAVCGRTA 217
L D+V ++ + WV +++R+ G AV LV M A +I+ + VCG
Sbjct: 337 LLDAVVSVLFTVVPWVIVMDRDPRPPGRNAVKEGCYLVSLMATDATLIKCWQTVVCGSMG 396

Query: 216 RWLLQHVIGQFAAASVICLAQMYFLVLWLIFYMSAR 109
+ + + G+ + + ++YF+V+WL+FY SAR
Sbjct: 397 QLAMVTLGGKVLGGFLHSIGEVYFMVVWLMFYFSAR 432


>tr|A9P252|A9P252_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 344

Score = 42.4 bits (98), Expect = 0.012
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 14/105 (13%)
Frame = -2

Query: 366 IYMIACWVTILERNYWGLGAVTRSGNLVKGMKWQALVIRLIEAAVCGRTARWLLQHVI-- 193
++ +AC +++LE Y GLGA+ +S NL+KG + ALV+ ++ G + +V+
Sbjct: 206 VWHLACVISVLEDKY-GLGAMQKSWNLIKGNRITALVLDILYLVFVGIIGWFFGYYVLHG 264

Query: 192 --------GQFAAASV----ICLAQMYFLVLWLIFYMSARSLHDQ 94
G+ A +V +C A + L+ +FY +S H +
Sbjct: 265 NRHGAGSTGRGAYGTVLVGLLCFAHLMGLLTQSVFYFVCKSYHHE 309


>tr|B8LMV5|B8LMV5_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 333

Score = 34.7 bits (78), Expect = 2.4
Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 13/103 (12%)
Frame = -2

Query: 363 YMIACWVTILERNYWGLGAVTRSGNLVKGMKWQALVIRLIEAAVCGRTARW--------- 211
+++A + + E + WGL + RS LVKGM+ + + L A A W
Sbjct: 200 WVLASVIPVAEGS-WGLEPLRRSSYLVKGMRRMSFSLNLFFAIAGLVLALWANYLQSSAS 258

Query: 210 ----LLQHVIGQFAAASVICLAQMYFLVLWLIFYMSARSLHDQ 94
LL ++ + + + +Y + +FYM ++ HD+
Sbjct: 259 DSLDLLSKIVQSITVLAAMAVLFLYNIATNTVFYMYCKAHHDE 301


>tr|A4HSS2|A4HSS2_LEIIN Pteridine transporter, putative
OS=Leishmania infantum GN=LinJ06.0310 PE=4 SV=1
Length = 677

Score = 34.7 bits (78), Expect = 2.4
Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 5/96 (5%)
Frame = -2

Query: 348 WVTILERNYWGLGAVTRSGNLVKGMKWQALVIRLIEAAVCGRTARWLLQHVIGQFAAASV 169
W + + +T + G +WQ L + CG A W L +I + +
Sbjct: 380 WRIFVYSSLMACSVITMMCVTILGTRWQLLYSCIAVVLACGACAFWALPFLIAKVS---- 435

Query: 168 ICLAQMYFLVLWL-----IFYMSARSLHDQPSHFSY 76
I FL L L FYM+++ + + HFSY
Sbjct: 436 IYFFSYAFLYLQLPGALDSFYMASKECYPEGPHFSY 471