NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915992
Clone id YMU001_000081_F02
Library
Length 464
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000081_F02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TGGAAAAAAAGAACTTAAGATACTGAAACTTTTTAACACTCTTTCAGTCTTTGTGTGTCC
CCTTAAAGGATTAGAATTAACACATTTCCTAGACAAAAGTTGCACGTCTCAATGTGTGCG
ACACCTGCACACCATGGCAGCCTTTACTGTATTAGAGTAGTCCCAATCCACAATGCATCT
ACAAGAACCACCAAATGCCTGGATAGAGACTTGGTAATCAAAGTGCCAACAAAGGATTTA
CAAGGTTCAAAACAAATGAACACAAAATGATCCGACGATATCACACCATGCGTATAAGAA
TCATCAATGACTGACACAGCCAATGAAGAGATGGATAGTAGGGTGGGGGTGATATCTTCA
AGATTGAAATTCAGGGAGACCCCAATAGGATGGTTCAAAATCCAAAATCGAACCTAGAAT
CTGATCTGCACCCTCACATAGAGATCGATCCAAGTTGGGATCCG
■■Homology search results ■■ -
sp_hit_id Q94529
Definition sp|Q94529|GS1_DROME GS1-like protein OS=Drosophila melanogaster
Align length 32
Score (bit) 33.5
E-value 0.46
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915992|Adiantum capillus-veneris mRNA, clone:
YMU001_000081_F02.
         (464 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q94529|GS1_DROME GS1-like protein OS=Drosophila melanogaster ...    33   0.46 
sp|Q08623|HDD1A_HUMAN Haloacid dehalogenase-like hydrolase domai...    33   0.60 
sp|P03080|ST_POVHA Small t antigen OS=Hamster polyomavirus PE=3 ...    30   3.9  
sp|P03079|MT_POVHA Middle T antigen OS=Hamster polyomavirus PE=1...    30   3.9  
sp|P03075|LT_POVHA Large T antigen OS=Hamster polyomavirus PE=3 ...    30   3.9  
sp|Q5RKR3|ISLR2_MOUSE Immunoglobulin superfamily containing leuc...    29   8.7  

>sp|Q94529|GS1_DROME GS1-like protein OS=Drosophila melanogaster
           GN=Gs1l PE=2 SV=2
          Length = 231

 Score = 33.5 bits (75), Expect = 0.46
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -3

Query: 462 DPNLDRSLCEGADQILGSILDFEPSYWGLPEF 367
           DP L +     A Q+L S+ DF+P  +GLP F
Sbjct: 198 DPRLSQEKTSHATQVLASLADFKPEQFGLPAF 229


>sp|Q08623|HDD1A_HUMAN Haloacid dehalogenase-like hydrolase
           domain-containing protein 1A OS=Homo sapiens GN=HDHD1A
           PE=1 SV=2
          Length = 214

 Score = 33.1 bits (74), Expect = 0.60
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -3

Query: 462 DPNLDRSLCEGADQILGSILDFEPSYWGLPEFQ 364
           D NL R L   A  +L S+ DF+P  +GLP ++
Sbjct: 182 DGNLSRDLTTKATLVLNSLQDFQPELFGLPSYE 214


>sp|P03080|ST_POVHA Small t antigen OS=Hamster polyomavirus PE=3
           SV=1
          Length = 194

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -3

Query: 453 LDRSLCEGADQILGSILDFEPSYWG 379
           +DR L +   Q L S+LD EP YWG
Sbjct: 1   MDRILTKEEKQALISLLDLEPQYWG 25


>sp|P03079|MT_POVHA Middle T antigen OS=Hamster polyomavirus PE=1
           SV=1
          Length = 401

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -3

Query: 453 LDRSLCEGADQILGSILDFEPSYWG 379
           +DR L +   Q L S+LD EP YWG
Sbjct: 1   MDRILTKEEKQALISLLDLEPQYWG 25


>sp|P03075|LT_POVHA Large T antigen OS=Hamster polyomavirus PE=3
           SV=1
          Length = 751

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -3

Query: 453 LDRSLCEGADQILGSILDFEPSYWG 379
           +DR L +   Q L S+LD EP YWG
Sbjct: 1   MDRILTKEEKQALISLLDLEPQYWG 25


>sp|Q5RKR3|ISLR2_MOUSE Immunoglobulin superfamily containing
           leucine-rich repeat protein 2 OS=Mus musculus GN=Islr2
           PE=2 SV=1
          Length = 745

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 375 GDPNRMVQNPKSNLESDLHPHI 440
           GDP+R V N   N  SDL PH+
Sbjct: 462 GDPSRYVSNHAFNQSSDLKPHV 483
tr_hit_id Q8L8P9
Definition tr|Q8L8P9|Q8L8P9_ARATH GS1-like protein OS=Arabidopsis thaliana
Align length 33
Score (bit) 52.0
E-value 1.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915992|Adiantum capillus-veneris mRNA, clone:
YMU001_000081_F02.
         (464 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q8L8P9|Q8L8P9_ARATH GS1-like protein OS=Arabidopsis thaliana ...    52   1e-05
tr|Q49SB5|Q49SB5_BRAJU Putative hydrolase (Fragment) OS=Brassica...    51   2e-05
tr|Q9SW01|Q9SW01_ARATH Putative uncharacterized protein AT4g2584...    49   1e-04
tr|Q8GW23|Q8GW23_ARATH Putative uncharacterized protein At4g2584...    49   1e-04
tr|A9TYI8|A9TYI8_PHYPA Predicted protein OS=Physcomitrella paten...    48   2e-04
tr|B6THA2|B6THA2_MAIZE Haloacid dehalogenase-like hydrolase doma...    48   3e-04
tr|B4FTM3|B4FTM3_MAIZE Putative uncharacterized protein OS=Zea m...    48   3e-04
tr|B7FHV4|B7FHV4_MEDTR Putative uncharacterized protein OS=Medic...    47   5e-04
tr|B6E208|B6E208_ELAGV Putative HAD superfamily hydrolase OS=Ela...    46   8e-04
tr|A7Q6E1|A7Q6E1_VITVI Chromosome chr11 scaffold_56, whole genom...    46   8e-04
tr|B4FM45|B4FM45_MAIZE Putative uncharacterized protein OS=Zea m...    45   0.002
tr|Q7XXR4|Q7XXR4_ORYSJ Os08g0243600 protein OS=Oryza sativa subs...    44   0.004
tr|B8BC92|B8BC92_ORYSI Putative uncharacterized protein OS=Oryza...    44   0.004
tr|A3BR24|A3BR24_ORYSJ Putative uncharacterized protein OS=Oryza...    44   0.004
tr|Q9FKM6|Q9FKM6_ARATH GS1-like protein OS=Arabidopsis thaliana ...    42   0.020
tr|Q8VZP1|Q8VZP1_ARATH Putative GS1 protein OS=Arabidopsis thali...    42   0.020
tr|B5VY39|B5VY39_SPIMA HAD-superfamily hydrolase, subfamily IA, ...    40   0.057
tr|B6NND2|B6NND2_BRAFL Putative uncharacterized protein (Fragmen...    40   0.057
tr|Q118F7|Q118F7_TRIEI HAD-superfamily hydrolase, subfamily IA, ...    40   0.075
tr|B6P1Y8|B6P1Y8_BRAFL Putative uncharacterized protein OS=Branc...    40   0.075
tr|B6NND4|B6NND4_BRAFL Putative uncharacterized protein (Fragmen...    40   0.075
tr|B6NND1|B6NND1_BRAFL Putative uncharacterized protein OS=Branc...    40   0.075
tr|A7SM45|A7SM45_NEMVE Predicted protein OS=Nematostella vectens...    39   0.13 
tr|B4QA79|B4QA79_DROSI GD22707 OS=Drosophila simulans GN=GD22707...    36   1.1  
tr|B4NYL0|B4NYL0_DROYA GE14717 OS=Drosophila yakuba GN=GE14717 P...    36   1.1  
tr|B4I397|B4I397_DROSE GM18089 OS=Drosophila sechellia GN=GM1808...    36   1.1  
tr|B3N3S9|B3N3S9_DROER GG24373 OS=Drosophila erecta GN=GG24373 P...    36   1.1  
tr|Q4P3M7|Q4P3M7_USTMA Putative uncharacterized protein OS=Ustil...    36   1.1  
tr|Q29LK4|Q29LK4_DROPS GA13732 OS=Drosophila pseudoobscura pseud...    35   1.4  
tr|B4GPT8|B4GPT8_DROPE GL15404 OS=Drosophila persimilis GN=GL154...    35   1.4  

>tr|Q8L8P9|Q8L8P9_ARATH GS1-like protein OS=Arabidopsis thaliana
           PE=2 SV=1
          Length = 298

 Score = 52.0 bits (123), Expect = 1e-05
 Identities = 21/33 (63%), Positives = 25/33 (75%)
 Frame = -3

Query: 462 DPNLDRSLCEGADQILGSILDFEPSYWGLPEFQ 364
           DP LD+S C  ADQ+L S+LDF+P  WGLP FQ
Sbjct: 262 DPRLDKSYCNVADQVLASLLDFKPEEWGLPSFQ 294


>tr|Q49SB5|Q49SB5_BRAJU Putative hydrolase (Fragment) OS=Brassica
           juncea GN=Hdlase1 PE=2 SV=1
          Length = 139

 Score = 51.2 bits (121), Expect = 2e-05
 Identities = 20/33 (60%), Positives = 26/33 (78%)
 Frame = -3

Query: 462 DPNLDRSLCEGADQILGSILDFEPSYWGLPEFQ 364
           DP LD+S C+ ADQ+L S+LDF+P  WGLP F+
Sbjct: 103 DPRLDKSYCDVADQVLASLLDFKPEEWGLPPFE 135


>tr|Q9SW01|Q9SW01_ARATH Putative uncharacterized protein AT4g25840
           OS=Arabidopsis thaliana GN=AT4g25840 PE=2 SV=1
          Length = 221

 Score = 48.9 bits (115), Expect = 1e-04
 Identities = 20/33 (60%), Positives = 24/33 (72%)
 Frame = -3

Query: 462 DPNLDRSLCEGADQILGSILDFEPSYWGLPEFQ 364
           D  LD+S C  ADQ+L S+LDF+P  WGLP FQ
Sbjct: 185 DSRLDKSYCNVADQVLASLLDFKPEEWGLPSFQ 217


>tr|Q8GW23|Q8GW23_ARATH Putative uncharacterized protein
           At4g25840/F14M19_120 (At4g25840) OS=Arabidopsis thaliana
           GN=At4g25840/F14M19_120 PE=2 SV=1
          Length = 249

 Score = 48.9 bits (115), Expect = 1e-04
 Identities = 20/33 (60%), Positives = 24/33 (72%)
 Frame = -3

Query: 462 DPNLDRSLCEGADQILGSILDFEPSYWGLPEFQ 364
           D  LD+S C  ADQ+L S+LDF+P  WGLP FQ
Sbjct: 213 DSRLDKSYCNVADQVLASLLDFKPEEWGLPSFQ 245


>tr|A9TYI8|A9TYI8_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_172694 PE=4 SV=1
          Length = 239

 Score = 48.1 bits (113), Expect = 2e-04
 Identities = 19/34 (55%), Positives = 27/34 (79%)
 Frame = -3

Query: 462 DPNLDRSLCEGADQILGSILDFEPSYWGLPEFQS 361
           DPNLD++LC+ ADQ+LGS+ +F+ + WGLP   S
Sbjct: 204 DPNLDKALCQEADQVLGSLDEFDYAQWGLPSIPS 237


>tr|B6THA2|B6THA2_MAIZE Haloacid dehalogenase-like hydrolase
           domain-containing protein 1A OS=Zea mays PE=2 SV=1
          Length = 241

 Score = 47.8 bits (112), Expect = 3e-04
 Identities = 20/33 (60%), Positives = 26/33 (78%)
 Frame = -3

Query: 462 DPNLDRSLCEGADQILGSILDFEPSYWGLPEFQ 364
           DP LD S  +GADQ+L S+LDF+P+ WGLP F+
Sbjct: 208 DPRLDVSYHKGADQVLSSLLDFKPAEWGLPAFK 240


>tr|B4FTM3|B4FTM3_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 277

 Score = 47.8 bits (112), Expect = 3e-04
 Identities = 20/33 (60%), Positives = 26/33 (78%)
 Frame = -3

Query: 462 DPNLDRSLCEGADQILGSILDFEPSYWGLPEFQ 364
           DP LD S  +GADQ+L S+LDF+P+ WGLP F+
Sbjct: 244 DPRLDVSYHKGADQVLSSLLDFKPAEWGLPAFK 276


>tr|B7FHV4|B7FHV4_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 241

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 19/33 (57%), Positives = 24/33 (72%)
 Frame = -3

Query: 462 DPNLDRSLCEGADQILGSILDFEPSYWGLPEFQ 364
           DP LD+S  + ADQ+L S+LDF PS W LP F+
Sbjct: 205 DPRLDKSFQDAADQVLNSLLDFNPSEWSLPPFE 237


>tr|B6E208|B6E208_ELAGV Putative HAD superfamily hydrolase OS=Elaeis
           guineensis var. tenera PE=2 SV=1
          Length = 244

 Score = 46.2 bits (108), Expect = 8e-04
 Identities = 20/33 (60%), Positives = 25/33 (75%)
 Frame = -3

Query: 462 DPNLDRSLCEGADQILGSILDFEPSYWGLPEFQ 364
           DP LD S  + ADQ+L S+LDF+PS WGLP F+
Sbjct: 208 DPRLDVSYHKEADQVLSSLLDFKPSEWGLPPFE 240


>tr|A7Q6E1|A7Q6E1_VITVI Chromosome chr11 scaffold_56, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00031358001
           PE=4 SV=1
          Length = 234

 Score = 46.2 bits (108), Expect = 8e-04
 Identities = 20/32 (62%), Positives = 23/32 (71%)
 Frame = -3

Query: 462 DPNLDRSLCEGADQILGSILDFEPSYWGLPEF 367
           DP LD S  E ADQ+L S+LDF P+ WGLP F
Sbjct: 198 DPRLDISFHEAADQVLSSLLDFNPNDWGLPPF 229