BP915981
Clone id YMU001_000081_D06
Library
Length 333
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000081_D06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AGCTCATATGTGTTCTCTAGCATGGCTGGCTGACCTATACGATTGGGAAGCGTTGGCGCA
GGGCAATTTGACATGCTACGGTGCTGCCTGTTATGGGACTACATTCCAAATTTTGGCAGT
AGTGCTCACCATTGCTCTGGCTTTGGATGCAATACTCACCTTGATTAGCAGGCCCCTCTA
CCAAAAGATGAGAACTGTTACTCTCCTTAATTAGCCTTCAGGACCCCTCCTCTCTCTCTC
TCTCTGTCTCTCATACATACCTTTGTGATTTATCTACTCGTTTGATCTTGCAACCATGCG
GGACCTATGGTGTCAAGGAAGATTATGCTTGGG
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915981|Adiantum capillus-veneris mRNA, clone:
YMU001_000081_D06.
(333 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id Q94D97
Definition tr|Q94D97|Q94D97_ORYSJ cDNA clone:001-013-G09, full insert sequence OS=Oryza sativa subsp. japonica
Align length 33
Score (bit) 34.7
E-value 2.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915981|Adiantum capillus-veneris mRNA, clone:
YMU001_000081_D06.
(333 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q94D97|Q94D97_ORYSJ cDNA clone:001-013-G09, full insert seque... 35 2.5
tr|A2WWI8|A2WWI8_ORYSI Putative uncharacterized protein OS=Oryza... 35 2.5
tr|Q8H6R3|Q8H6R3_PONTR Nodulin-like protein OS=Poncirus trifolia... 34 4.2

>tr|Q94D97|Q94D97_ORYSJ cDNA clone:001-013-G09, full insert sequence
OS=Oryza sativa subsp. japonica GN=P0439E11.14-1 PE=2
SV=1
Length = 540

Score = 34.7 bits (78), Expect = 2.5
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +2

Query: 8 MCSLAWLADLYDWEALAQGNLTCYGAACYGTTF 106
+C + A LY EA A+G LTC GA CY TF
Sbjct: 465 LCFGYFAAFLYQREAGARGTLTCSGAGCYRETF 497


>tr|A2WWI8|A2WWI8_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_04268 PE=4 SV=1
Length = 540

Score = 34.7 bits (78), Expect = 2.5
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +2

Query: 8 MCSLAWLADLYDWEALAQGNLTCYGAACYGTTF 106
+C + A LY EA A+G LTC GA CY TF
Sbjct: 465 LCFGYFAAFLYQREAGARGTLTCSGAGCYRETF 497


>tr|Q8H6R3|Q8H6R3_PONTR Nodulin-like protein OS=Poncirus trifoliata
GN=CTV.14 PE=4 SV=1
Length = 564

Score = 33.9 bits (76), Expect = 4.2
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +2

Query: 35 LYDWEALAQGNLTCYGAACYGTTFQXXXXXXXXXXXXXXXXXXXSRPLYQKM 190
LYD EA QG+ TC GA C+ TF RP+YQ +
Sbjct: 499 LYDAEATKQGSSTCIGAECFRLTFLVLAGVCGLGTILSIILTIRIRPVYQML 550