BP915940
Clone id YMU001_000079_G05
Library
Length 434
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000079_G05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CCCCTAGTGAAAGAGAATACTGTTTCTTGCTTTGTAAAAGATTGCTATCGGTAAAATGTA
TGAAATTGTGTGCATGATTCAGTCGAAGTGGCTAGCAACATGGATCTCTTTCGTGGTAGC
CATTAGTCACAATTAAGGATGCATTATTTACACAGAATTAAGGATTAGTCTGATTTGAGA
TCCATATGCCACTCCGCACGCCACCTCTCTGGCACCATGTGGATTCTGTTCACATTCCAT
CCTGAAGCATGGAGCTCAGATAAGAAGACAGGATAGTTGCTCTCCATCCAGACACAGCTG
CTATTCTCTGACTCATCGGCATCAAAACTTTGCAGAAGACTTGCAGCAACAAGCGCATGT
ACGTAAGATTTCAAATGATCCTCTCTTGTCGCATACCGATGTAAAATCACAAAAATTATT
CCTCTATGTGGGTA
■■Homology search results ■■ -
sp_hit_id Q91W34
Definition sp|Q91W34|CP058_MOUSE UPF0420 protein C16orf58 homolog OS=Mus musculus
Align length 98
Score (bit) 37.0
E-value 0.035
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915940|Adiantum capillus-veneris mRNA, clone:
YMU001_000079_G05.
(434 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q91W34|CP058_MOUSE UPF0420 protein C16orf58 homolog OS=Mus mu... 37 0.035
sp|Q499P8|CP058_RAT UPF0420 protein C16orf58 homolog OS=Rattus n... 36 0.078
sp|Q6BT42|DSE1_DEBHA Protein DSE1 OS=Debaryomyces hansenii GN=DS... 34 0.30
sp|P51688|SPHM_HUMAN N-sulphoglucosamine sulphohydrolase OS=Homo... 30 3.3
sp|P53828|YN36_YEAST Putative uncharacterized protein YNL296W OS... 30 5.6
sp|Q5R8F6|CP058_PONAB UPF0420 protein C16orf58 homolog OS=Pongo ... 30 5.6
sp|Q96GQ5|CP058_HUMAN UPF0420 protein C16orf58 OS=Homo sapiens G... 30 5.6
sp|Q9USZ4|RPA34_SCHPO DNA-directed RNA polymerase I subunit rpa3... 29 7.3
sp|Q12296|MAM3_YEAST Protein MAM3 OS=Saccharomyces cerevisiae GN... 29 9.6

>sp|Q91W34|CP058_MOUSE UPF0420 protein C16orf58 homolog OS=Mus
musculus PE=2 SV=1
Length = 466

Score = 37.0 bits (84), Expect = 0.035
Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 19/98 (19%)
Frame = -1

Query: 425 RGIIFVILHRYATREDHLKSYVHALVA-------------ASLLQSFDADESENSSCVWM 285
R + V L + A E L++ H L+ A L AD + S +
Sbjct: 360 RNQVQVALSQEAGPETVLRAATHGLILGALQEDGPLPGELAELRHQVQADPKKESWILVR 419

Query: 284 ESN------YPVFLSELHASGWNVNRIHMVPERWRAEW 189
E++ +P FL L A+GW + H+ + WRA W
Sbjct: 420 ETHQVLDTLFPKFLKGLQAAGWKTEKHHLEVDEWRATW 457


>sp|Q499P8|CP058_RAT UPF0420 protein C16orf58 homolog OS=Rattus
norvegicus PE=2 SV=1
Length = 466

Score = 35.8 bits (81), Expect = 0.078
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -1

Query: 287 MESNYPVFLSELHASGWNVNRIHMVPERWRAEW 189
+++ +P FL L A+GW + H+ + WRA W
Sbjct: 425 LDTLFPKFLKGLQAAGWKTEKHHLEVDEWRATW 457


>sp|Q6BT42|DSE1_DEBHA Protein DSE1 OS=Debaryomyces hansenii GN=DSE1
PE=3 SV=2
Length = 657

Score = 33.9 bits (76), Expect = 0.30
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = -1

Query: 386 REDHLKSYVHALVAASLLQSFDADESENSSCVWMESNYPVFLSELHASGWNVNRIHMVPE 207
R++ +K Y L S + S D +S NSS W+ N+ +E+ ++NR+++
Sbjct: 12 RQNAVKKYSPELSPVSSMSSLDLPKSNNSSSSWLLDNHNPKDTEILNKSCSLNRLNIKSN 71

Query: 206 RWR 198
W+
Sbjct: 72 YWK 74


>sp|P51688|SPHM_HUMAN N-sulphoglucosamine sulphohydrolase OS=Homo
sapiens GN=SGSH PE=1 SV=1
Length = 502

Score = 30.4 bits (67), Expect = 3.3
Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Frame = +2

Query: 188 ATPHATSLAPCGFCSHSILKHGAQIRRQDSCSPSRHSCYSLTHRHQNFAEDLQQQAH--- 358
ATPH +LA S+L A SCSPSR S + +HQN L Q H
Sbjct: 46 ATPHLDALA-----RRSLLFRNA-FTSVSSCSPSRASLLTGLPQHQNGMYGLHQDVHHFN 99

Query: 359 -VRKISNDPLL 388
K+ + PLL
Sbjct: 100 SFDKVRSLPLL 110


>sp|P53828|YN36_YEAST Putative uncharacterized protein YNL296W
OS=Saccharomyces cerevisiae GN=YNL296W PE=5 SV=1
Length = 104

Score = 29.6 bits (65), Expect = 5.6
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -1

Query: 353 LVAASLLQSFDADESENSSCVWMESNYPVFLS 258
+V L S D + + SSC+ MESN PVF++
Sbjct: 72 MVEFLLFDSEDKERNSASSCLCMESNPPVFMA 103


>sp|Q5R8F6|CP058_PONAB UPF0420 protein C16orf58 homolog OS=Pongo
abelii PE=2 SV=1
Length = 468

Score = 29.6 bits (65), Expect = 5.6
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -1

Query: 275 YPVFLSELHASGWNVNRIHMVPERWRAEW 189
+P FL L +GW + + + WRA W
Sbjct: 431 FPKFLKGLQDAGWKTEKHQLEVDEWRATW 459


>sp|Q96GQ5|CP058_HUMAN UPF0420 protein C16orf58 OS=Homo sapiens
GN=C16orf58 PE=1 SV=2
Length = 468

Score = 29.6 bits (65), Expect = 5.6
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -1

Query: 275 YPVFLSELHASGWNVNRIHMVPERWRAEW 189
+P FL L +GW + + + WRA W
Sbjct: 431 FPKFLKGLQDAGWKTEKHQLEVDEWRATW 459


>sp|Q9USZ4|RPA34_SCHPO DNA-directed RNA polymerase I subunit rpa34
OS=Schizosaccharomyces pombe GN=rpa34 PE=1 SV=1
Length = 251

Score = 29.3 bits (64), Expect = 7.3
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +2

Query: 254 AQIRRQDSCSPSRHSCYSLTHRHQNFAEDLQQQAHVRKISNDPLLSHTDVKSQ 412
+ I Q S S S H N ED+ + A + K+ P+L+ D+K +
Sbjct: 20 SSIEDQHSSKEPEQSVESNNHGESNAQEDVAEIAGLEKVQGKPVLTTNDLKKE 72


>sp|Q12296|MAM3_YEAST Protein MAM3 OS=Saccharomyces cerevisiae
GN=MAM3 PE=1 SV=1
Length = 706

Score = 28.9 bits (63), Expect = 9.6
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
Frame = -1

Query: 416 IFVILHRYATRED-------HLKSYVHALVAASLLQSFDADESENSSCVWMESN 276
+FV +H++ R+ H+ SY+H L +S + AD+++ SS + SN
Sbjct: 389 VFVDMHQHIMRQQPGPLSKRHITSYLHHLYTSSHKEHKAADQADESSPLLSPSN 442


tr_hit_id A9SCJ4
Definition tr|A9SCJ4|A9SCJ4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 81
Score (bit) 77.0
E-value 4.0e-13
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915940|Adiantum capillus-veneris mRNA, clone:
YMU001_000079_G05.
(434 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9SCJ4|A9SCJ4_PHYPA Predicted protein OS=Physcomitrella paten... 77 4e-13
tr|B8LKD3|B8LKD3_PICSI Putative uncharacterized protein OS=Picea... 62 1e-08
tr|Q9LMX1|Q9LMX1_ARATH F21F23.21 protein OS=Arabidopsis thaliana... 59 2e-07
tr|Q84JB8|Q84JB8_ARATH Putative uncharacterized protein At1g1377... 59 2e-07
tr|B3H4U4|B3H4U4_ARATH Uncharacterized protein At1g13770.2 OS=Ar... 59 2e-07
tr|B6TVK3|B6TVK3_MAIZE Putative uncharacterized protein OS=Zea m... 57 5e-07
tr|B4F9L0|B4F9L0_MAIZE Putative uncharacterized protein OS=Zea m... 57 5e-07
tr|A7P2F8|A7P2F8_VITVI Chromosome chr1 scaffold_5, whole genome ... 53 7e-06
tr|Q10Q12|Q10Q12_ORYSJ Expressed protein (Putative uncharacteriz... 52 1e-05
tr|B8AQS9|B8AQS9_ORYSI Putative uncharacterized protein OS=Oryza... 52 1e-05
tr|B8FV09|B8FV09_DESHD Putative uncharacterized protein OS=Desul... 33 7.1
tr|Q7XKW2|Q7XKW2_ORYSA OSJNBa0073E02.7 protein OS=Oryza sativa G... 33 7.1
tr|Q0JBQ4|Q0JBQ4_ORYSJ Os04g0517300 protein OS=Oryza sativa subs... 33 7.1
tr|Q01J52|Q01J52_ORYSA OSIGBa0145M07.5 protein OS=Oryza sativa G... 33 7.1
tr|A6N1H9|A6N1H9_ORYSI Putative uncharacterized protein (Fragmen... 33 7.1
tr|A3AVL0|A3AVL0_ORYSJ Putative uncharacterized protein OS=Oryza... 33 7.1
tr|A2YNN9|A2YNN9_ORYSI Putative uncharacterized protein OS=Oryza... 33 7.1
tr|A2XVJ5|A2XVJ5_ORYSI Putative uncharacterized protein OS=Oryza... 33 7.1
tr|Q5X8R0|Q5X8R0_LEGPA Putative uncharacterized protein OS=Legio... 33 9.3
tr|A9S9J8|A9S9J8_PHYPA Predicted protein OS=Physcomitrella paten... 33 9.3
tr|B7PZ23|B7PZ23_IXOSC Putative uncharacterized protein (Fragmen... 33 9.3
tr|B2VR59|B2VR59_PYRTR Zinc finger protein 383 OS=Pyrenophora tr... 33 9.3

>tr|A9SCJ4|A9SCJ4_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_183447 PE=4 SV=1
Length = 437

Score = 77.0 bits (188), Expect = 4e-13
Identities = 37/81 (45%), Positives = 47/81 (58%)
Frame = -1

Query: 431 PHRGIIFVILHRYATREDHLKSYVHALVAASLLQSFDADESENSSCVWMESNYPVFLSEL 252
P I+ V+LH+ AT +D L YVHAL A L AD+SE + WM++NY FL L
Sbjct: 350 PKGAIVHVVLHKLATPQDFLHGYVHALCLADLQLRSPADQSEELAISWMKNNYTAFLDSL 409

Query: 251 HASGWNVNRIHMVPERWRAEW 189
SGW +RI + WRAEW
Sbjct: 410 GKSGWATDRILVETGEWRAEW 430


>tr|B8LKD3|B8LKD3_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 446

Score = 62.4 bits (150), Expect = 1e-08
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Frame = -1

Query: 422 GIIFVILHRYATREDHLKSYVHALVAASLLQSFDA--DESENSSCVWMESNYPVFLS-EL 252
G I VIL++ + D L+SY+H LV + + S + D + SC+WME Y +F+S +L
Sbjct: 356 GTIEVILNKDSVSADILQSYIHGLVLSYHMGSSSSVNDANNADSCLWMEKYYSMFISKQL 415

Query: 251 HASGWNVNRIHMVPERWRAEW 189
ASGWN R+ + WRA W
Sbjct: 416 QASGWNTGRLLVPSVDWRAHW 436


>tr|Q9LMX1|Q9LMX1_ARATH F21F23.21 protein OS=Arabidopsis thaliana
GN=F21F23.21 PE=4 SV=1
Length = 438

Score = 58.5 bits (140), Expect = 2e-07
Identities = 28/79 (35%), Positives = 45/79 (56%)
Frame = -1

Query: 425 RGIIFVILHRYATREDHLKSYVHALVAASLLQSFDADESENSSCVWMESNYPVFLSELHA 246
+G + VILH+ + D LKSY+HA+V A+L++ + SE + W++ +Y L +L +
Sbjct: 352 KGNVSVILHKDSKPADVLKSYIHAIVLANLMEKSTSFYSEGEA--WIDKHYDELLHKLRS 409

Query: 245 SGWNVNRIHMVPERWRAEW 189
GW R+ WRA W
Sbjct: 410 GGWKTERLLSPSITWRANW 428


>tr|Q84JB8|Q84JB8_ARATH Putative uncharacterized protein At1g13770
OS=Arabidopsis thaliana GN=At1g13770 PE=2 SV=1
Length = 440

Score = 58.5 bits (140), Expect = 2e-07
Identities = 28/79 (35%), Positives = 45/79 (56%)
Frame = -1

Query: 425 RGIIFVILHRYATREDHLKSYVHALVAASLLQSFDADESENSSCVWMESNYPVFLSELHA 246
+G + VILH+ + D LKSY+HA+V A+L++ + SE + W++ +Y L +L +
Sbjct: 354 KGNVSVILHKDSKPADVLKSYIHAIVLANLMEKSTSFYSEGEA--WIDKHYDELLHKLRS 411

Query: 245 SGWNVNRIHMVPERWRAEW 189
GW R+ WRA W
Sbjct: 412 GGWKTERLLSPSITWRANW 430


>tr|B3H4U4|B3H4U4_ARATH Uncharacterized protein At1g13770.2
OS=Arabidopsis thaliana GN=At1g13770 PE=4 SV=1
Length = 353

Score = 58.5 bits (140), Expect = 2e-07
Identities = 28/79 (35%), Positives = 45/79 (56%)
Frame = -1

Query: 425 RGIIFVILHRYATREDHLKSYVHALVAASLLQSFDADESENSSCVWMESNYPVFLSELHA 246
+G + VILH+ + D LKSY+HA+V A+L++ + SE + W++ +Y L +L +
Sbjct: 267 KGNVSVILHKDSKPADVLKSYIHAIVLANLMEKSTSFYSEGEA--WIDKHYDELLHKLRS 324

Query: 245 SGWNVNRIHMVPERWRAEW 189
GW R+ WRA W
Sbjct: 325 GGWKTERLLSPSITWRANW 343


>tr|B6TVK3|B6TVK3_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 442

Score = 57.0 bits (136), Expect = 5e-07
Identities = 29/79 (36%), Positives = 43/79 (54%)
Frame = -1

Query: 425 RGIIFVILHRYATREDHLKSYVHALVAASLLQSFDADESENSSCVWMESNYPVFLSELHA 246
+GI++V +H+ AT D L+S+VH LV AS Q+ E WM+ Y F+S+L
Sbjct: 356 QGIVYVFIHKEATPADVLRSFVHGLVLASSTQNSKPQHLEARR--WMDEMYTSFISKLQT 413

Query: 245 SGWNVNRIHMVPERWRAEW 189
G++ R+ WRA W
Sbjct: 414 EGYSTERLLSHSILWRAHW 432


>tr|B4F9L0|B4F9L0_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 442

Score = 57.0 bits (136), Expect = 5e-07
Identities = 29/79 (36%), Positives = 43/79 (54%)
Frame = -1

Query: 425 RGIIFVILHRYATREDHLKSYVHALVAASLLQSFDADESENSSCVWMESNYPVFLSELHA 246
+GI++V +H+ AT D L+S+VH LV AS Q+ E WM+ Y F+S+L
Sbjct: 356 QGIVYVFIHKEATPADVLRSFVHGLVLASSTQNSKPQHLEARR--WMDEMYTSFISKLQT 413

Query: 245 SGWNVNRIHMVPERWRAEW 189
G++ R+ WRA W
Sbjct: 414 EGYSTERLLSHSILWRAHW 432


>tr|A7P2F8|A7P2F8_VITVI Chromosome chr1 scaffold_5, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00030040001
PE=4 SV=1
Length = 80

Score = 53.1 bits (126), Expect = 7e-06
Identities = 27/72 (37%), Positives = 40/72 (55%)
Frame = -1

Query: 404 LHRYATREDHLKSYVHALVAASLLQSFDADESENSSCVWMESNYPVFLSELHASGWNVNR 225
+H+ +T D L+S++HALV A+L+ E+ S WM+ Y FL +L +SGW R
Sbjct: 1 MHKDSTASDVLQSFIHALVMANLVDKSIYIHLESRS--WMDKQYENFLLKLQSSGWKTER 58

Query: 224 IHMVPERWRAEW 189
+ WRA W
Sbjct: 59 LLSPSIIWRANW 70


>tr|Q10Q12|Q10Q12_ORYSJ Expressed protein (Putative uncharacterized
protein) OS=Oryza sativa subsp. japonica
GN=LOC_Os03g11500 PE=4 SV=1
Length = 497

Score = 52.0 bits (123), Expect = 1e-05
Identities = 24/78 (30%), Positives = 40/78 (51%)
Frame = -1

Query: 422 GIIFVILHRYATREDHLKSYVHALVAASLLQSFDADESENSSCVWMESNYPVFLSELHAS 243
G + + +H+ A D L S++H LV A L+Q + +E W++ Y F+S+L
Sbjct: 412 GSVHIFIHKQAAATDILMSFIHGLVLAHLMQKSKSGHAEARQ--WIDEKYNTFISKLQVE 469

Query: 242 GWNVNRIHMVPERWRAEW 189
G++ R+ WRA W
Sbjct: 470 GYSTERLLSHSIVWRAHW 487


>tr|B8AQS9|B8AQS9_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_10514 PE=4 SV=1
Length = 479

Score = 52.0 bits (123), Expect = 1e-05
Identities = 24/78 (30%), Positives = 40/78 (51%)
Frame = -1

Query: 422 GIIFVILHRYATREDHLKSYVHALVAASLLQSFDADESENSSCVWMESNYPVFLSELHAS 243
G + + +H+ A D L S++H LV A L+Q + +E W++ Y F+S+L
Sbjct: 394 GSVHIFIHKQAAATDILMSFIHGLVLAHLMQKSKSGHAEARQ--WIDEKYNTFISKLQVE 451

Query: 242 GWNVNRIHMVPERWRAEW 189
G++ R+ WRA W
Sbjct: 452 GYSTERLLSHSIVWRAHW 469