BP915936
Clone id YMU001_000079_F12
Library
Length 539
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000079_F12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CATTGATTTCAAGGCAGGTTGGCAAAAAAAGCATCCTTTCTTGCTTGCAAGCATCTTTAT
TTTGTGTACTTGATTGTACTTGGACAAGATGTCAACAACAACATGCATATCCATCAAGCA
CGAATTCCAAAGGCCATTCTTAAGGATATGCTAACAAAGGCAGTCAGAATCCAACCTAAT
CATCTATAAGGGCTATAGCTTGGGTGATGTCTTATTTTGTTTTTGGAAGGGTAGACAAGA
TAGCAAAACCTATAGTCTATAGATCACTACAGTTATTTAGTTCCTCCTACTTAGTGCATT
TTGTAACCCACTCAGCACCTAATTTTTGAAATGAATCAACATAAACTTTTTGTAACAGGT
AGGTACTAAAGCATTTCTTTTCTAGGTTATTCCTTCAAGAATATGATAGATTTCATCCAT
AACATATTCAAAGAGTTTTGCAAACTTAGCAACTCTACCATGGCACTCTCTCTTGTCTAT
ATTGCAATCTCCATTGCTTTCCAATGGTCAACTTTGAATGGCATGCTCTCTGTCACGAG
■■Homology search results ■■ -
sp_hit_id Q8D3B6
Definition sp|Q8D3B6|SYFA_WIGBR Phenylalanyl-tRNA synthetase alpha chain OS=Wigglesworthia glossinidia brevipalpis
Align length 26
Score (bit) 30.8
E-value 4.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915936|Adiantum capillus-veneris mRNA, clone:
YMU001_000079_F12.
(539 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8D3B6|SYFA_WIGBR Phenylalanyl-tRNA synthetase alpha chain OS... 31 4.4

>sp|Q8D3B6|SYFA_WIGBR Phenylalanyl-tRNA synthetase alpha chain
OS=Wigglesworthia glossinidia brevipalpis GN=pheS PE=3
SV=1
Length = 333

Score = 30.8 bits (68), Expect = 4.4
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -1

Query: 263 SIDYRFCYLVYPSKNKIRHHPSYSPY 186
SI Y FCY + K KIR PSY P+
Sbjct: 231 SILYDFCYSLLGKKIKIRFRPSYFPF 256


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915936|Adiantum capillus-veneris mRNA, clone:
YMU001_000079_F12.
(539 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******