BP915866 |
Clone id |
YMU001_000078_E10 |
Library |
YMU01 |
Length |
396 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000078_E10. |
Accession |
BP915866 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AATTGCTCAAGCCGGCGACAACATGACTGTCATTGTTTTGTGCAAAGGCAGGCTTTGATG CCATCTCTTTGCTTAATTTTGTTTTTTGTGTTAATACGTGCAGGAGGCAACAGGAGGCAG AGGTAAAATTAGTTGAGGAAGAAGCTTTGAGAAGGATAGATACTGCCATTGAAAAGATGG TTCAAGAGGCTTTAGACTCTGAAGAGCTGCGAAAAGAAGTTGACAGGAGGTTACAAGAGG GCCGGAAAAGAATAGCGGAGGAGGTTACCAGCCAAATGGTAAAGGAGAAGGAACAAGCTG CCATGGAAGCTCAGCGAAAAGAGGATGCCGCTCGCCGCCAAGAGGAGGAATTGCAGAGAA TACGAGAAGAGAATCAGCGTAAAGCTGAGGAGGCTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O04096 |
Definition |
sp|O04096|FB3_ARATH F-box protein At1g10890 OS=Arabidopsis thaliana |
Align length |
57 |
Score (bit) |
57.0 |
E-value |
3.0e-08 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915866|Adiantum capillus-veneris mRNA, clone: YMU001_000078_E10. (396 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O04096|FB3_ARATH F-box protein At1g10890 OS=Arabidopsis thali... 57 3e-08 sp|Q5R7F9|MA7D2_PONAB MAP7 domain-containing protein 2 OS=Pongo ... 37 0.031 sp|Q96T17|MA7D2_HUMAN MAP7 domain-containing protein 2 OS=Homo s... 37 0.040 sp|Q9VL63|U430_DROME UPF0430 protein CG31712 OS=Drosophila melan... 36 0.052 sp|Q9NZM3|ITSN2_HUMAN Intersectin-2 OS=Homo sapiens GN=ITSN2 PE=... 36 0.052 sp|Q969G3|SMCE1_HUMAN SWI/SNF-related matrix-associated actin-de... 33 0.58 sp|Q4KME6|PERQ2_DANRE PERQ amino acid-rich with GYF domain-conta... 33 0.58 sp|Q7SFN5|PALI_NEUCR pH-response regulator protein palI/rim-9 OS... 33 0.58 sp|A2R7P5|NST1_ASPNC Stress response protein nst1 OS=Aspergillus... 33 0.58 sp|P47069|MPS3_YEAST Spindle pole body assembly component MPS3 O... 32 0.99 sp|Q54KW6|Y8887_DICDI Putative uncharacterized protein DDB_G0287... 32 1.3 sp|P72929|Y1021_SYNY3 Uncharacterized protein sll1021 OS=Synecho... 32 1.3 sp|Q5A2K0|NST1_CANAL Stress response protein NST1 OS=Candida alb... 32 1.3 sp|Q0ZGT2|NEXN_HUMAN Nexilin OS=Homo sapiens GN=NEXN PE=1 SV=1 32 1.3 sp|Q6IG02|K22E_RAT Keratin, type II cytoskeletal 2 epidermal OS=... 32 1.3 sp|A7MQE1|IF2_ENTS8 Translation initiation factor IF-2 OS=Entero... 32 1.3 sp|O67825|IF2_AQUAE Translation initiation factor IF-2 OS=Aquife... 32 1.3 sp|Q8TUY7|PFDA_METKA Prefoldin subunit alpha OS=Methanopyrus kan... 31 1.7 sp|Q1E1H4|NST1_COCIM Stress response protein NST1 OS=Coccidioide... 31 1.7 sp|A6T0Y8|IF2_JANMA Translation initiation factor IF-2 OS=Janthi... 31 1.7 sp|Q80W93|HYDIN_MOUSE Hydrocephalus-inducing protein OS=Mus musc... 31 1.7 sp|P48435|SOX11_CHICK Transcription factor SOX-11 OS=Gallus gall... 31 2.2 sp|A3LYI0|NST1_PICST Stress response protein NST1 OS=Pichia stip... 31 2.2 sp|P05661|MYSA_DROME Myosin heavy chain, muscle OS=Drosophila me... 31 2.2 sp|Q91785|KI15A_XENLA Kinesin-like protein KIF15-A OS=Xenopus la... 31 2.2 sp|Q05682|CALD1_HUMAN Caldesmon OS=Homo sapiens GN=CALD1 PE=1 SV=2 31 2.2 sp|A8MTP2|YI032_HUMAN Putative uncharacterized protein ENSP00000... 30 2.9 sp|P47342|Y096_MYCGE Uncharacterized protein MG096 OS=Mycoplasma... 30 2.9 sp|Q1RM03|TCHP_DANRE Trichoplein keratin filament-binding protei... 30 2.9 sp|Q9Z2J4|NEXN_RAT Nexilin OS=Rattus norvegicus GN=Nexn PE=1 SV=1 30 2.9
>sp|O04096|FB3_ARATH F-box protein At1g10890 OS=Arabidopsis thaliana GN=At1g10890 PE=2 SV=1 Length = 592
Score = 57.0 bits (136), Expect = 3e-08 Identities = 26/57 (45%), Positives = 43/57 (75%) Frame = +3
Query: 156 IDTAIEKMVQEALDSEELRKEVDRRLQEGRKRIAEEVTSQMVKEKEQAAMEAQRKED 326 ++ AI K V+E+L SE+++ E+ L+EGRKR+ EEV +Q+ +EKE + +EA+ KE+ Sbjct: 90 VEEAIRKKVEESLQSEKIKMEILTLLEEGRKRLNEEVAAQLEEEKEASLIEAKEKEE 146
>sp|Q5R7F9|MA7D2_PONAB MAP7 domain-containing protein 2 OS=Pongo abelii GN=MAP7D2 PE=2 SV=1 Length = 763
Score = 37.0 bits (84), Expect = 0.031 Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 10/63 (15%) Frame = +3
Query: 168 IEKMVQEALDSEELRKEVD----------RRLQEGRKRIAEEVTSQMVKEKEQAAMEAQR 317 +EK Q+ L+ EEL+++ + R+ +E RKR EE Q +EK +A EA+R Sbjct: 449 LEKEEQDRLEREELKRKAEEERLRLEEEARKQEEERKRQEEEKKKQEEEEKREAGEEAKR 508
Query: 318 KED 326 K + Sbjct: 509 KAE 511
>sp|Q96T17|MA7D2_HUMAN MAP7 domain-containing protein 2 OS=Homo sapiens GN=MAP7D2 PE=2 SV=1 Length = 732
Score = 36.6 bits (83), Expect = 0.040 Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 10/63 (15%) Frame = +3
Query: 168 IEKMVQEALDSEELRKEVD----------RRLQEGRKRIAEEVTSQMVKEKEQAAMEAQR 317 +EK Q+ L+ EEL+++ + R+ +E RKR EE Q +EK +A EA+R Sbjct: 423 VEKEEQDRLEREELKRKAEEERLRLEEEARKQEEERKRQEEEKKKQEGEEKRKAGEEAKR 482
Query: 318 KED 326 K + Sbjct: 483 KAE 485
>sp|Q9VL63|U430_DROME UPF0430 protein CG31712 OS=Drosophila melanogaster GN=CG31712 PE=1 SV=3 Length = 290
Score = 36.2 bits (82), Expect = 0.052 Identities = 16/59 (27%), Positives = 37/59 (62%), Gaps = 2/59 (3%) Frame = +3
Query: 156 IDTAIEKMVQEALDS--EELRKEVDRRLQEGRKRIAEEVTSQMVKEKEQAAMEAQRKED 326 I+ ++K V+E L+ +E+ +EV+RR++ + + E+ ++ + +EQ E +R+E+ Sbjct: 150 IEMLVKKRVEEELEKRRDEIEQEVNRRVETAKAEMEREMMLELERRREQIREEERRREE 208
>sp|Q9NZM3|ITSN2_HUMAN Intersectin-2 OS=Homo sapiens GN=ITSN2 PE=1 SV=2 Length = 1696
Score = 36.2 bits (82), Expect = 0.052 Identities = 21/50 (42%), Positives = 31/50 (62%) Frame = +3
Query: 174 KMVQEALDSEELRKEVDRRLQEGRKRIAEEVTSQMVKEKEQAAMEAQRKE 323 K +E L E LRKE + E +KR+ EE T + ++E+E+ A E QRK+ Sbjct: 696 KQGKENLWKENLRKEEE----EKQKRLQEEKTQEKIQEEERKAEEKQRKD 741
>sp|Q969G3|SMCE1_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 OS=Homo sapiens GN=SMARCE1 PE=1 SV=2 Length = 411
Score = 32.7 bits (73), Expect = 0.58 Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 1/58 (1%) Frame = +3
Query: 156 IDTAIEKMVQEALDSEE-LRKEVDRRLQEGRKRIAEEVTSQMVKEKEQAAMEAQRKED 326 ++ +EK+ E +EE RK + R +E ++ AE S +V E+EQAA + + K+D Sbjct: 278 VEVDMEKIAAEIAQAEEQARKRQEEREKEAAEQ-AERSQSSIVPEEEQAANKGEEKKD 334
>sp|Q4KME6|PERQ2_DANRE PERQ amino acid-rich with GYF domain-containing protein 2 OS=Danio rerio GN=gigyf2 PE=2 SV=1 Length = 1335
Score = 32.7 bits (73), Expect = 0.58 Identities = 17/52 (32%), Positives = 32/52 (61%) Frame = +3
Query: 171 EKMVQEALDSEELRKEVDRRLQEGRKRIAEEVTSQMVKEKEQAAMEAQRKED 326 E+ QE L+++ R+E ++RL+E A + Q +E+E+ EAQR+++ Sbjct: 875 ERRKQEELEAQR-RREEEKRLEEEAAAAAAALLRQQQEEQEKREQEAQRQQE 925
>sp|Q7SFN5|PALI_NEUCR pH-response regulator protein palI/rim-9 OS=Neurospora crassa GN=rim-9 PE=3 SV=1 Length = 705
Score = 32.7 bits (73), Expect = 0.58 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 5/42 (11%) Frame = +2
Query: 239 GPEKNSGGGYQPNGKGEG-----TSCHGSSAKRGCRSPPRGG 349 GP +N GGY P G+G G +G RG R PP G Sbjct: 348 GPPQNGRGGYGPPGRGRGGYGPPPRGYGGPGPRGGRGPPPQG 389
>sp|A2R7P5|NST1_ASPNC Stress response protein nst1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=nst1 PE=3 SV=1 Length = 1201
Score = 32.7 bits (73), Expect = 0.58 Identities = 20/51 (39%), Positives = 34/51 (66%), Gaps = 2/51 (3%) Frame = +3
Query: 183 QEALDSEELRKEVDR--RLQEGRKRIAEEVTSQMVKEKEQAAMEAQRKEDA 329 ++A ++E LRKE ++ RL+E R+R AE K++EQ +E +R+E+A Sbjct: 609 RKAQEAERLRKEAEKQKRLREERERQAEIER----KQREQKELEKKRREEA 655
>sp|P47069|MPS3_YEAST Spindle pole body assembly component MPS3 OS=Saccharomyces cerevisiae GN=MPS3 PE=1 SV=2 Length = 682
Score = 32.0 bits (71), Expect = 0.99 Identities = 12/42 (28%), Positives = 28/42 (66%) Frame = +3
Query: 192 LDSEELRKEVDRRLQEGRKRIAEEVTSQMVKEKEQAAMEAQR 317 +D + +E++RRLQ ++ I EE+T+++ +++Q + Q+ Sbjct: 360 IDKDYFIQEMNRRLQSNKQEIWEEITNRLETQQQQQQQQVQQ 401
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q0ISA1 |
Definition |
tr|Q0ISA1|Q0ISA1_ORYSJ Os11g0544200 protein (Fragment) OS=Oryza sativa subsp. japonica |
Align length |
103 |
Score (bit) |
67.8 |
E-value |
3.0e-10 |
Report |
|