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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915840
Clone id YMU001_000077_G04
Library
Length 452
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000077_G04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CCTCGAGTTAGTGGTGGTGGTGGTGGTGGCTCATGTGCTGGACGAGAGGAAGATGCCCCT
ACATTGTCACTGGTGCTGCGAGAAGCGACATGGTGCCTGTATGCAGAAGAGAGGGAGTGT
GTTAAGTGTGCAATTTGATGAAATGCATTAGAGAGAGAGTGAGGGAGGTGGGGGAGATGG
TGTAGAGCATTGGATAGGCTGTGAGGCAGATGATGAAGGGCATGAGAGAAGCTATGGGGC
AAGTGAGGCAAATGATGCATAGCATTGGAAAAGCTGTGAGGTAAGCGTGGCATTAGCAAG
CTTGGCCGCCGACGGCGGCTGCGCTGTGGCACAGACTTTGTATTGCAATTGATATTGTTG
CAGCTAGTGCTCAAGCTGTGAATGTCAGGTGACTCAGTACTGTAGACATAATCATCATTA
TCACAGAGCATTTCACTGGTGCAATCGCACGC
■■Homology search results ■■ -
sp_hit_id Q95MH6
Definition sp|Q95MH6|GNRR2_CERAE Gonadotropin-releasing hormone II receptor OS=Cercopithecus aethiops
Align length 40
Score (bit) 30.8
E-value 2.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915840|Adiantum capillus-veneris mRNA, clone:
YMU001_000077_G04.
         (452 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q95MH6|GNRR2_CERAE Gonadotropin-releasing hormone II receptor...    31   2.8  
sp|Q8BU25|RAMP_MOUSE Inactive serine protease RAMP OS=Mus muscul...    30   3.7  
sp|Q2QWE3|P2C77_ORYSJ Probable protein phosphatase 2C 77 OS=Oryz...    29   8.2  

>sp|Q95MH6|GNRR2_CERAE Gonadotropin-releasing hormone II receptor
           OS=Cercopithecus aethiops GN=GNRHR2 PE=2 SV=1
          Length = 379

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
 Frame = -2

Query: 268 PMLCIICLTCPIASLMPFIICLTAYPML---YTISPTSLT 158
           P +C+  L   +  L+ FI+C T Y +L   Y  SPT LT
Sbjct: 256 PRVCLRALRLALLILLTFILCWTPYYLLGLWYWFSPTMLT 295


>sp|Q8BU25|RAMP_MOUSE Inactive serine protease RAMP OS=Mus musculus
           GN=Ramp PE=2 SV=2
          Length = 720

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 35  VLDERKMPLHCHWCCEKRHGACMQKRGSVLSVQFDEM 145
           +L+   +  HC W    R G  +Q R  +LS++FD M
Sbjct: 140 LLESYPLNAHCEWTIHARPGFIIQLRFGMLSLEFDYM 176


>sp|Q2QWE3|P2C77_ORYSJ Probable protein phosphatase 2C 77 OS=Oryza
           sativa subsp. japonica GN=Os12g0198200 PE=2 SV=1
          Length = 421

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
 Frame = +2

Query: 155 ESEGG----GGDGVEHWIGCEADDEGHERSYGASEANDA*HWKSCEVSVALASLAADGGC 322
           ES GG    GG GV        D     R++G +       W +CE   A  SLAADG C
Sbjct: 300 ESTGGYVSCGGSGVWR----VQDSLAVSRAFGDAGVKQ---WVTCEPETARVSLAADGDC 352
tr_hit_id A9CZ82
Definition tr|A9CZ82|A9CZ82_9RHIZ Glycosyltransferase-like protein OS=Hoeflea phototrophica DFL-43
Align length 52
Score (bit) 33.1
E-value 7.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915840|Adiantum capillus-veneris mRNA, clone:
YMU001_000077_G04.
         (452 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9CZ82|A9CZ82_9RHIZ Glycosyltransferase-like protein OS=Hoefl...    33   7.1  
tr|B6MC72|B6MC72_BRAFL Putative uncharacterized protein OS=Branc...    33   7.1  

>tr|A9CZ82|A9CZ82_9RHIZ Glycosyltransferase-like protein OS=Hoeflea
           phototrophica DFL-43 GN=HPDFL43_00950 PE=4 SV=1
          Length = 410

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 22/52 (42%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +2

Query: 167 GGGDGVEHWIGCEADDEGHERSYGASEA-NDA*HWKSCEVSVALASLAADGG 319
           GGG G  H   CEAD +  ER Y   EA  D  H  +   S A  S+A D G
Sbjct: 11  GGGVGKAHAALCEADKQADERHYVLLEAPRDTRHVDAIRRSGAAVSIAQDMG 62


>tr|B6MC72|B6MC72_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_80648 PE=4 SV=1
          Length = 608

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 31/83 (37%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
 Frame = +2

Query: 98  CMQKRGSVLSVQFDEMH*RESEGGGGDGVEHWIGCEADDEGHERSYGASEANDA*HWKSC 277
           C      VLS Q + +H   SEGGG   ++H +G   DD+G  R   A   N      S 
Sbjct: 505 CQNHCIKVLSSQGEHLHTFGSEGGGEGQLQHPLGVHCDDQG--RILVADSGNRRVEVFSE 562

Query: 278 EVS-VALASLAADG-GCAVAQTL 340
           E   VA A  A DG GC V   L
Sbjct: 563 EGEFVAHAVTAEDGLGCPVGVAL 585