BP915785 |
Clone id |
YMU001_000076_G08 |
Library |
YMU01 |
Length |
542 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000076_G08. |
Accession |
BP915785 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3695Contig1 |
Sequence |
AGCTGCAGCAGCAACTGGAACTTCATTCGCCTTTAAAGCCGTTTCATCGTACAAAGGAGG CCAATCCTCCTTGGCTGCCAAGAGATTGGCTAACTCTTTCAATGGCCTTAAAGCTGTAAG TTCATCAAACATCCATGGGAAAACCATCTCTCCGGTGAAGAAAACAGGTTCTCCATTCTT TGCAGCCTTTACTGCATCAAACTGATCTCTAAACTCATCCCGTATCCTATGAGCTGCCCA ATTTGATGCAGCACCCTGACAATAAATCGATTCGTGCATCAAAGCATACAGGGGATTTGT ATCAAAAGGAAACCAGTTCTCGAACATCCTTAAGAAAGTACTACTAAGTCTTTTTGGGGT CCCTTGCACTAGCACAGGGTCCCATGCCCTCTCCAACAAATAGTGTAAACGCTCAAAGCC TCCACTTGAGCCCAATCCAGATAATCCCAACAGTTGCAGTCCACGAGGGCTTAGTTTACC GCCAGAAGGCCAGATCAACCCCTCCATCTTCTGTGTGGTGAAGAAAAAGCACTATCTCCT GG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P46547 |
Definition |
sp|P46547|PIP_AERSO Proline iminopeptidase OS=Aeromonas sobria |
Align length |
138 |
Score (bit) |
113.0 |
E-value |
5.0e-25 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915785|Adiantum capillus-veneris mRNA, clone: YMU001_000076_G08. (542 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P46547|PIP_AERSO Proline iminopeptidase OS=Aeromonas sobria G... 113 5e-25 sp|Q12L09|META_SHEDO Homoserine O-succinyltransferase OS=Shewane... 32 1.5 sp|Q69554|U19_HHV6U Uncharacterized protein U19 OS=Human herpesv... 32 2.0 sp|Q9NS91|RAD18_HUMAN E3 ubiquitin-protein ligase RAD18 OS=Homo ... 31 3.4 sp|A8FTB0|META_SHESH Homoserine O-succinyltransferase OS=Shewane... 31 4.5 sp|A3QG19|META_SHELP Homoserine O-succinyltransferase OS=Shewane... 31 4.5 sp|Q5EE38|ACD_MOUSE Adrenocortical dysplasia protein OS=Mus musc... 31 4.5 sp|A1S5C5|META_SHEAM Homoserine O-succinyltransferase OS=Shewane... 30 7.6 sp|Q92619|HMHA1_HUMAN Minor histocompatibility protein HA-1 OS=H... 30 7.6 sp|Q7P206|CAPP_CHRVO Phosphoenolpyruvate carboxylase OS=Chromoba... 30 7.6 sp|Q9YAZ0|SYV_AERPE Valyl-tRNA synthetase OS=Aeropyrum pernix GN... 30 9.9 sp|Q8EGC8|META_SHEON Homoserine O-succinyltransferase OS=Shewane... 30 9.9 sp|Q6C187|BBP_YARLI Branchpoint-bridging protein OS=Yarrowia lip... 30 9.9
>sp|P46547|PIP_AERSO Proline iminopeptidase OS=Aeromonas sobria GN=pip PE=1 SV=3 Length = 425
Score = 113 bits (283), Expect = 5e-25 Identities = 60/138 (43%), Positives = 79/138 (57%) Frame = -3
Query: 417 FERLHYLLERAWDPVLVQGTPKRLSSTFLRMFENWFPFDTNPLYALMHESIYCQGAASNW 238 FE L+YLLE A+ ++L+ FL + PF+TNP++A++HE IYC+GAAS+W Sbjct: 246 FEELYYLLEDAF-------IGEKLNPAFLYQVQAMQPFNTNPVFAILHELIYCEGAASHW 298
Query: 237 AAHRIRDEFRDQFDAVKAAKNGEPVFFTGEMVFPWMFDELTALRPXXXXXXXXXXXEDWP 58 AA R+R EF A G+ FTGEM+FPWMF++ L P DW Sbjct: 299 AAERVRGEF-----PALAWAQGKDFAFTGEMIFPWMFEQFRELIPLKEAAHLLAEKADWG 353
Query: 57 PLYDETALKANEVPVAAA 4 PLYD L N+VPVA A Sbjct: 354 PLYDPVQLARNKVPVACA 371
>sp|Q12L09|META_SHEDO Homoserine O-succinyltransferase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=metA PE=3 SV=1 Length = 314
Score = 32.3 bits (72), Expect = 1.5 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 4/40 (10%) Frame = -1
Query: 449 WDYL----DWAQVEALSVYTICWRGHGTLC*CKGPQKDLV 342 WD++ DW+Q SV +CW H L G Q+ L+ Sbjct: 121 WDHIREIIDWSQTHVTSVLFLCWAAHAALYHLYGLQRQLL 160
>sp|Q69554|U19_HHV6U Uncharacterized protein U19 OS=Human herpesvirus 6A (strain Uganda-1102) GN=U19 PE=4 SV=1 Length = 389
Score = 32.0 bits (71), Expect = 2.0 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Frame = -3
Query: 261 CQGAA-SNWAAHRIRDEFRDQFDAVKAAKNGEPVFFTGEMVFPWMFDEL 118 CQ A SN+ A + RDE+ DQF P+F TG V P F ++ Sbjct: 136 CQNAILSNFIAQKSRDEYIDQFQKYFTRMRHTPIFLTG--VLPRRFQKV 182
>sp|Q9NS91|RAD18_HUMAN E3 ubiquitin-protein ligase RAD18 OS=Homo sapiens GN=RAD18 PE=1 SV=1 Length = 495
Score = 31.2 bits (69), Expect = 3.4 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 5/59 (8%) Frame = +1
Query: 190 YCIKLISKLIPYPMSCPI*CSTLT-----INRFVHQSIQGICIKRKPVLEHP*ESTTKS 351 YC I K + Y CP C T+T NR + + ++ + R +L+ ES KS Sbjct: 45 YCSLCIRKFLSYKTQCPTCCVTVTEPDLKNNRILDELVKSLNFARNHLLQFALESPAKS 103
>sp|A8FTB0|META_SHESH Homoserine O-succinyltransferase OS=Shewanella sediminis (strain HAW-EB3) GN=metA PE=3 SV=1 Length = 314
Score = 30.8 bits (68), Expect = 4.5 Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 4/33 (12%) Frame = -1
Query: 461 DCNCWDYL----DWAQVEALSVYTICWRGHGTL 375 D + WD++ DW+Q SV +CW H L Sbjct: 117 DVSYWDHIREIIDWSQQHVTSVLFLCWAAHAAL 149
>sp|A3QG19|META_SHELP Homoserine O-succinyltransferase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=metA PE=3 SV=1 Length = 321
Score = 30.8 bits (68), Expect = 4.5 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 4/40 (10%) Frame = -1
Query: 449 WDYL----DWAQVEALSVYTICWRGHGTLC*CKGPQKDLV 342 WD++ DW+Q SV +CW H L G Q+ L+ Sbjct: 121 WDHIREIIDWSQHHVTSVLFLCWAAHAALYHLYGLQRKLL 160
>sp|Q5EE38|ACD_MOUSE Adrenocortical dysplasia protein OS=Mus musculus GN=Acd PE=2 SV=1 Length = 416
Score = 30.8 bits (68), Expect = 4.5 Identities = 22/59 (37%), Positives = 25/59 (42%) Frame = +2
Query: 362 PCTSTGSHALSNK*CKRSKPPLEPNPDNPNSCSPRGLSLPPEGQINPSIFCVVKKKHYL 538 PC ST S L N C S PL P P + SC R + E Q C KK+ L Sbjct: 300 PCNSTPSSLLLN--CSPSLSPLHPAPRSHQSCETRAQAPKLEFQ------CSFKKRQLL 350
>sp|A1S5C5|META_SHEAM Homoserine O-succinyltransferase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=metA PE=3 SV=1 Length = 316
Score = 30.0 bits (66), Expect = 7.6 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 4/40 (10%) Frame = -1
Query: 449 WDYL----DWAQVEALSVYTICWRGHGTLC*CKGPQKDLV 342 WD++ DW+Q SV +CW H L G +++L+ Sbjct: 121 WDHIREIIDWSQSHVTSVLFLCWAAHAGLYHLYGLKRELL 160
>sp|Q92619|HMHA1_HUMAN Minor histocompatibility protein HA-1 OS=Homo sapiens GN=HMHA1 PE=1 SV=2 Length = 1136
Score = 30.0 bits (66), Expect = 7.6 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 6/55 (10%) Frame = +3
Query: 357 GSLALAQGPM---PSPTNS-VNAQSLHLSPIQ--IIPTVAVHEGLVYRQKARSTP 503 G+L + GP P PT + V+ SL P Q +I T+ VH GLV+ ++ TP Sbjct: 928 GNLGIVFGPTLLRPRPTEATVSLSSLVDYPHQARVIETLIVHYGLVFEEEPEETP 982
>sp|Q7P206|CAPP_CHRVO Phosphoenolpyruvate carboxylase OS=Chromobacterium violaceum GN=ppc PE=3 SV=1 Length = 898
Score = 30.0 bits (66), Expect = 7.6 Identities = 21/61 (34%), Positives = 28/61 (45%) Frame = +3
Query: 294 DLYQKETSSRTSLRKYY*VFLGSLALAQGPMPSPTNSVNAQSLHLSPIQIIPTVAVHEGL 473 +L Q S SLR + GS LA G + SV+ L P+ + AVHEG+ Sbjct: 354 ELIQDLASLSASLRAH-----GSALLADGRLSRLIRSVDVFGFFLMPLDLRQHAAVHEGV 408
Query: 474 V 476 V Sbjct: 409 V 409
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TIX9 |
Definition |
tr|A9TIX9|A9TIX9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
166 |
Score (bit) |
202.0 |
E-value |
9.0e-51 |
Report |
|