BP915691
Clone id YMU001_000074_F08
Library
Length 497
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000074_F08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AACACCAAACCATTGACTTTTAAGGGAGAAGATTGAGATCGCAATAAGGATGCAGTGAAT
ATCTATCTCAGCAAGTGGGATGGAATTCACACCTTATGGCGTACTCCGGCACGCAGTCAG
AGCACTGCAAATAAGCTTAACTATGGAAGGCAAGGCCTACAAGTGGTGGATGTCTCTCAA
GGAGAAGAATATCGTACCACAGAGTTGGGCAACCTTTTTGAGGCTATGTTTCGCCAAAGA
ATTCTTGCCTACAAATGACGCAGATCGGAATTGGACGGCTTGGGACACGTGTTCCATGCA
CCAATACCCATCATTACTTGAATATATATCTCACTATCGGGATGTTATCCTCAAGTTGGA
AGGACTAGACACCTTTCAACAAGTACGTGGGTTGATCCGCGGTCTGACGCCAGAGCTTAC
GAAGCACGTCAAGACTCAAGACCCTAAAACACTTGAGGAAGCCATAGTGAAAGCACACAT
ACATGATGATCCAGATG
■■Homology search results ■■ -
sp_hit_id Q499M5
Definition sp|Q499M5|ANR16_RAT Ankyrin repeat domain-containing protein 16 OS=Rattus norvegicus
Align length 58
Score (bit) 32.7
E-value 0.95
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915691|Adiantum capillus-veneris mRNA, clone:
YMU001_000074_F08.
(497 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q499M5|ANR16_RAT Ankyrin repeat domain-containing protein 16 ... 33 0.95
sp|Q7LC44|ARC_HUMAN Activity-regulated cytoskeleton-associated p... 32 2.1
sp|Q6LNF7|Y2797_PHOPR UPF0208 membrane protein PBPRA2797 OS=Phot... 31 2.8
sp|Q60328|Y012_METJA Uncharacterized protein MJ0012 OS=Methanoca... 31 3.6
sp|Q2LWY9|RNH_SYNAS Ribonuclease H OS=Syntrophus aciditrophicus ... 31 3.6
sp|P26675|SOS_DROME Protein son of sevenless OS=Drosophila melan... 30 6.1

>sp|Q499M5|ANR16_RAT Ankyrin repeat domain-containing protein 16
OS=Rattus norvegicus GN=Ankrd16 PE=2 SV=1
Length = 370

Score = 32.7 bits (73), Expect = 0.95
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = -2

Query: 211 CPTLWYDILLLERHPPLVGLAFHS*AYLQCSDCVPEYAIRCEFHPTC*DRYSLHPYCD 38
CP +W + R P H+ A C + V E RC + P C D + P+ D
Sbjct: 169 CPDVWKTESKIRRTP------LHTAAMHGCFEAVQELLERCHYEPDCRDNCGVTPFMD 220


>sp|Q7LC44|ARC_HUMAN Activity-regulated cytoskeleton-associated
protein OS=Homo sapiens GN=ARC PE=1 SV=1
Length = 396

Score = 31.6 bits (70), Expect = 2.1
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 5/126 (3%)
Frame = +2

Query: 128 QISLTMEGKAYKWWMSLKEKNIVPQSWATFLRLCFAKEFLPTNDADRNWTAWDT---CSM 298
QI M G A KWW K+ ++ ++W F KEFL ++ + A
Sbjct: 241 QIQNHMNGPAKKWW-EFKQGSV--KNWVEF-----KKEFLQYSEGTLSREAIQRELDLPQ 292

Query: 299 HQYPSLLEYISHYRDVILKLE-GLDTFQQVRGLIRGLTPELTKHVKTQDPKTLEEAIVKA 475
Q L +++ RD+ L D + ++ ++ L P+L + ++ PKTLE+ I +
Sbjct: 293 KQGEPLDQFLWRKRDLYQTLYVDADEEEIIQYVVGTLQPKLKRFLRHPLPKTLEQLIQRG 352

Query: 476 -HIHDD 490
+ DD
Sbjct: 353 MEVQDD 358


>sp|Q6LNF7|Y2797_PHOPR UPF0208 membrane protein PBPRA2797
OS=Photobacterium profundum GN=PBPRA2797 PE=3 SV=2
Length = 149

Score = 31.2 bits (69), Expect = 2.8
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +2

Query: 74 SGMEFTPYGVLRHAVRALQISLTMEGKAYKWWMSLKEKNIVPQSWATFLRLCFAK 238
S M F YG L A+ +LTM + WW+ + + +P S A + R + K
Sbjct: 56 SQMAFNNYGALPQAMTVALFALTMPLQGL-WWLGKRSRTTLPPSLAIWYREIYEK 109


>sp|Q60328|Y012_METJA Uncharacterized protein MJ0012
OS=Methanocaldococcus jannaschii GN=MJ0012 PE=4 SV=1
Length = 208

Score = 30.8 bits (68), Expect = 3.6
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = -1

Query: 272 NSDLRHL*ARILWRNIASKRLPNSVVRYSSP*ETSTTCRPC 150
NS+ R WR IA K SVV Y +P TS TC C
Sbjct: 46 NSNFNRNLDRTNWRKIAKKLEYKSVVLYVNPHYTSKTCPVC 86


>sp|Q2LWY9|RNH_SYNAS Ribonuclease H OS=Syntrophus aciditrophicus
(strain SB) GN=rnhA PE=3 SV=1
Length = 173

Score = 30.8 bits (68), Expect = 3.6
Identities = 17/67 (25%), Positives = 28/67 (41%)
Frame = +2

Query: 29 KIEIAIRMQ*ISISASGMEFTPYGVLRHAVRALQISLTMEGKAYKWWMSLKEKNIVPQSW 208
++EI ++ + S T Y ++ V A+ KA W + +EK + P W
Sbjct: 65 RMEILAAIKGLEALKSACSVTLYSDSQYLVNAINKGWAQRWKANGWKRNAREKALNPDLW 124

Query: 209 ATFLRLC 229
L LC
Sbjct: 125 ERLLELC 131


>sp|P26675|SOS_DROME Protein son of sevenless OS=Drosophila
melanogaster GN=Sos PE=1 SV=2
Length = 1596

Score = 30.0 bits (66), Expect = 6.1
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +2

Query: 320 EYISHYRDVILKLEGLDTFQQVRGLIRGLTPELTK 424
+YI H +D+ + +++F+QV+GL+ L +L K
Sbjct: 399 DYIKHLKDLSSSQDDIESFEQVQGLLHPLHCDLEK 433


tr_hit_id A5BIY7
Definition tr|A5BIY7|A5BIY7_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 115
Score (bit) 42.4
E-value 0.012
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915691|Adiantum capillus-veneris mRNA, clone:
YMU001_000074_F08.
(497 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5BIY7|A5BIY7_VITVI Putative uncharacterized protein OS=Vitis... 42 0.012
tr|A8JFZ6|A8JFZ6_CHLRE Predicted protein (Fragment) OS=Chlamydom... 42 0.021
tr|A8IUZ8|A8IUZ8_CHLRE Predicted protein OS=Chlamydomonas reinha... 42 0.021
tr|A5C633|A5C633_VITVI Putative uncharacterized protein OS=Vitis... 40 0.061
tr|A5BMN5|A5BMN5_VITVI Putative uncharacterized protein OS=Vitis... 39 0.10
tr|Q84ZV5|Q84ZV5_SOYBN Polyprotein OS=Glycine max PE=4 SV=1 39 0.14
tr|A5ASY8|A5ASY8_VITVI Putative uncharacterized protein OS=Vitis... 39 0.14
tr|Q94HV4|Q94HV4_ORYSA Putative retroelement OS=Oryza sativa GN=... 38 0.30
tr|Q7XFZ5|Q7XFZ5_ORYSJ Os10g0317000 protein OS=Oryza sativa subs... 38 0.30
tr|Q3C0I2|Q3C0I2_LOTJA Putative uncharacterized protein OS=Lotus... 37 0.40
tr|Q3C0I1|Q3C0I1_LOTJA Putative uncharacterized protein OS=Lotus... 37 0.40
tr|Q3C0I0|Q3C0I0_LOTJA Putative uncharacterized protein OS=Lotus... 37 0.40
tr|Q3C0H8|Q3C0H8_LOTJA Putative uncharacterized protein OS=Lotus... 37 0.40
tr|Q2R4J6|Q2R4J6_ORYSJ Retrotransposon protein, putative, Ty3-gy... 37 0.40
tr|Q7XRK1|Q7XRK1_ORYSJ OSJNBa0042D13.9 protein OS=Oryza sativa s... 37 0.68
tr|A5AZ10|A5AZ10_VITVI Putative uncharacterized protein OS=Vitis... 37 0.68
tr|A7QXA1|A7QXA1_VITVI Chromosome undetermined scaffold_217, who... 36 1.2
tr|Q851T3|Q851T3_ORYSJ Putative gag-pol OS=Oryza sativa subsp. j... 35 1.5
tr|Q2QLX1|Q2QLX1_ORYSJ Retrotransposon protein, putative, Ty3-gy... 35 1.5
tr|Q109Y8|Q109Y8_ORYSJ Retrotransposon protein, putative, Ty3-gy... 35 1.5
tr|Q9ARZ4|Q9ARZ4_ORYSJ Putative polyprotein OS=Oryza sativa subs... 35 2.0
tr|Q7XER7|Q7XER7_ORYSJ Retrotransposon protein, putative, Ty3-gy... 35 2.0
tr|Q9SIL1|Q9SIL1_ARATH Putative TNP1-like transposon protein OS=... 35 2.6
tr|Q60E39|Q60E39_ORYSJ Putative polyprotein (Putative uncharacte... 35 2.6
tr|Q6BV11|Q6BV11_DEBHA DEHA2C06226p OS=Debaryomyces hansenii GN=... 35 2.6
tr|Q94GP8|Q94GP8_ORYSJ cDNA clone:J023101N02, full insert sequen... 34 3.4
tr|Q7XVB2|Q7XVB2_ORYSJ OSJNBa0081G05.3 protein OS=Oryza sativa s... 34 3.4
tr|Q01LP4|Q01LP4_ORYSA OSIGBa0150M16.4 protein (OSIGBa0135K14.3 ... 34 3.4
tr|A5BZW2|A5BZW2_VITVI Putative uncharacterized protein OS=Vitis... 34 3.4
tr|Q94I49|Q94I49_ORYSJ Putative retroelement OS=Oryza sativa sub... 34 4.4

>tr|A5BIY7|A5BIY7_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_025425 PE=4 SV=1
Length = 446

Score = 42.4 bits (98), Expect = 0.012
Identities = 33/115 (28%), Positives = 55/115 (47%)
Frame = +2

Query: 143 MEGKAYKWWMSLKEKNIVPQSWATFLRLCFAKEFLPTNDADRNWTAWDTCSMHQYPSLLE 322
+EG+A W+ LKE+ V +W T L+ + PT D D + Q S+ E
Sbjct: 197 LEGEAQLWYQILKEEGEV--AWLT-LKEGLNSRYGPTEFDD---FFGDLTRLKQVGSVRE 250

Query: 323 YISHYRDVILKLEGLDTFQQVRGLIRGLTPELTKHVKTQDPKTLEEAIVKAHIHD 487
Y S + ++ ++ L+ QQV I GL ++ V+ P TL A+ A +++
Sbjct: 251 YQSQFEKLLSRVGKLNQSQQVACFIGGLNEDVRIDVQAMKPPTLSAAVGLARLYE 305


>tr|A8JFZ6|A8JFZ6_CHLRE Predicted protein (Fragment)
OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_179671 PE=4
SV=1
Length = 204

Score = 41.6 bits (96), Expect = 0.021
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
Frame = +2

Query: 119 RALQISLTMEGKAYKWWMSLKEKNIVPQSWATFLRLCFAKEFLPTNDADRNWTAWDTCSM 298
+ L +++ G + W S E +I +WA F ++ F + F + N A C
Sbjct: 44 QTLDVAVCRLGDSAATWYSGVENSIT--TWAQF-QITFQERFEANQEELYNLLA--RCQQ 98

Query: 299 HQYPSLLEYISHYRDVILKLEGLDTFQQVR--GLIRGLTPELTKHVKTQDPKTLEEAI 466
+ + EY +RD+ +L L+T V +RGL P++ V PKTLEEAI
Sbjct: 99 RRREPVREYADRFRDLASQLS-LNTSDPVHTFSFLRGLQPDIYDQVFLLRPKTLEEAI 155


>tr|A8IUZ8|A8IUZ8_CHLRE Predicted protein OS=Chlamydomonas
reinhardtii GN=CHLREDRAFT_173027 PE=4 SV=1
Length = 604

Score = 41.6 bits (96), Expect = 0.021
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
Frame = +2

Query: 119 RALQISLTMEGKAYKWWMSLKEKNIVPQSWATFLRLCFAKEFLPTNDADRNWTAWDTCSM 298
+ L +++ G + W S E +I +WA F ++ F + F + N A C
Sbjct: 175 QTLDVAVCRLGDSAATWYSGVENSIT--TWAQF-QITFQERFEANQEELYNLLA--RCQQ 229

Query: 299 HQYPSLLEYISHYRDVILKLEGLDTFQQVR--GLIRGLTPELTKHVKTQDPKTLEEAI 466
+ + EY +RD+ +L L+T V +RGL P++ V PKTLEEAI
Sbjct: 230 RRREPVREYADRFRDLASQLS-LNTSDPVHTFSFLRGLQPDIYDQVFLLRPKTLEEAI 286


>tr|A5C633|A5C633_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_034528 PE=4 SV=1
Length = 1241

Score = 40.0 bits (92), Expect = 0.061
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 3/139 (2%)
Frame = +2

Query: 83 EFTPYGVLRHAVRALQISLTMEGKAYKWWMSLKEKNIVPQS---WATFLRLCFAKEFLPT 253
+F Y + A + S +EG+A +WW L+ WA F +A+ F PT
Sbjct: 88 QFFEYQGIPVAQKVSLASFHLEGEANQWWQWLRRSYSEEGKEVXWADFEEELWAR-FGPT 146

Query: 254 NDADRNWTAWDTCSMHQYPSLLEYISHYRDVILKLEGLDTFQQVRGLIRGLTPELTKHVK 433
D + + Q SL +Y + + +++G V + GL E+ ++
Sbjct: 147 ECEDFDEAL---SRVKQMGSLRDYQREFEKLGNRVQGWTQKALVGTFMGGLKSEIADXIR 203

Query: 434 TQDPKTLEEAIVKAHIHDD 490
PK+L+EAI A + DD
Sbjct: 204 MFKPKSLKEAISLARMRDD 222


>tr|A5BMN5|A5BMN5_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_042364 PE=4 SV=1
Length = 566

Score = 39.3 bits (90), Expect = 0.10
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 3/139 (2%)
Frame = +2

Query: 83 EFTPYGVLRHAVRALQISLTMEGKAYKWWMSLKE---KNIVPQSWATFLRLCFAKEFLPT 253
+F Y + A + S +EG+ +WW L+ + +WA F +A+ F PT
Sbjct: 74 QFFEYQGIPAAQKVSLASFHLEGETNQWWQWLRRSYSEEGKEVAWADFEEELWAR-FGPT 132

Query: 254 NDADRNWTAWDTCSMHQYPSLLEYISHYRDVILKLEGLDTFQQVRGLIRGLTPELTKHVK 433
D + + Q SL +Y + + +++G V + GL E+ ++
Sbjct: 133 ECEDFDEAL---SRVKQMGSLRDYQREFEKLGNRVQGWTQKALVGMFMGGLKSEIADDIR 189

Query: 434 TQDPKTLEEAIVKAHIHDD 490
PK+L+EAI A + DD
Sbjct: 190 MFKPKSLKEAISLARMRDD 208


>tr|Q84ZV5|Q84ZV5_SOYBN Polyprotein OS=Glycine max PE=4 SV=1
Length = 1552

Score = 38.9 bits (89), Expect = 0.14
Identities = 30/136 (22%), Positives = 62/136 (45%)
Frame = +2

Query: 83 EFTPYGVLRHAVRALQISLTMEGKAYKWWMSLKEKNIVPQSWATFLRLCFAKEFLPTNDA 262
+F Y A R + S+ ++ W+ L +K SW F R +F P+
Sbjct: 119 QFFDYYATPDADRLIIASVHLDQDVVPWYQML-QKTEPFSSWQAFTR-ALELDFGPSAYD 176

Query: 263 DRNWTAWDTCSMHQYPSLLEYISHYRDVILKLEGLDTFQQVRGLIRGLTPELTKHVKTQD 442
T + ++Q ++ EY + ++ +++GL + + GL E+++ VK +
Sbjct: 177 CPRATLF---KLNQSATVNEYYMQFTALVNRVDGLSAEAILDCFVSGLQEEISRDVKAME 233

Query: 443 PKTLEEAIVKAHIHDD 490
P+TL +A+ A + ++
Sbjct: 234 PRTLTKAVALAKLFEE 249


>tr|A5ASY8|A5ASY8_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_014148 PE=4 SV=1
Length = 1384

Score = 38.9 bits (89), Expect = 0.14
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 3/139 (2%)
Frame = +2

Query: 83 EFTPYGVLRHAVRALQISLTMEGKAYKWWMSLKE---KNIVPQSWATFLRLCFAKEFLPT 253
+F Y + A + S +EG+A +WW L+ + +WA F +A+ F PT
Sbjct: 164 QFFEYQGIPAAQKVSLXSFHLEGEANQWWQWLRRSYSEEGKEVAWADFEEELWAR-FGPT 222

Query: 254 NDADRNWTAWDTCSMHQYPSLLEYISHYRDVILKLEGLDTFQQVRGLIRGLTPELTKHVK 433
D + + Q SL +Y + + +++G V + L E+ ++
Sbjct: 223 ECEDFDEAL---SRVKQMSSLRDYQREFEKLGNRVQGWTQKALVGTFMGSLKSEIADDIR 279

Query: 434 TQDPKTLEEAIVKAHIHDD 490
PK+L+EAI A DD
Sbjct: 280 MFKPKSLKEAIXLARXRDD 298


>tr|Q94HV4|Q94HV4_ORYSA Putative retroelement OS=Oryza sativa
GN=OSJNBb0036B06.3 PE=4 SV=1
Length = 1476

Score = 37.7 bits (86), Expect = 0.30
Identities = 28/118 (23%), Positives = 55/118 (46%)
Frame = +2

Query: 113 AVRALQISLTMEGKAYKWWMSLKEKNIVPQSWATFLRLCFAKEFLPTNDADRNWTAWDTC 292
A R S ++ A W+M +++ P +W F L + P R+ ++
Sbjct: 98 AERTWMASYNLQDGAQLWYMHVQDNEGTP-TWERFKELLNLRYGPPL----RSVPLFELS 152

Query: 293 SMHQYPSLLEYISHYRDVILKLEGLDTFQQVRGLIRGLTPELTKHVKTQDPKTLEEAI 466
+ + ++ +Y ++ ++ + L+ QQV+ GL P L+ V+ Q P +LEEA+
Sbjct: 153 ACRRTSTVEDYQDRFQALLPRAGRLEEAQQVQLFTGGLLPPLSLQVQQQKPASLEEAM 210


>tr|Q7XFZ5|Q7XFZ5_ORYSJ Os10g0317000 protein OS=Oryza sativa subsp.
japonica GN=Os10g0317000 PE=4 SV=1
Length = 1476

Score = 37.7 bits (86), Expect = 0.30
Identities = 28/118 (23%), Positives = 55/118 (46%)
Frame = +2

Query: 113 AVRALQISLTMEGKAYKWWMSLKEKNIVPQSWATFLRLCFAKEFLPTNDADRNWTAWDTC 292
A R S ++ A W+M +++ P +W F L + P R+ ++
Sbjct: 98 AERTWMASYNLQDGAQLWYMHVQDNEGTP-TWERFKELLNLRYGPPL----RSVPLFELS 152

Query: 293 SMHQYPSLLEYISHYRDVILKLEGLDTFQQVRGLIRGLTPELTKHVKTQDPKTLEEAI 466
+ + ++ +Y ++ ++ + L+ QQV+ GL P L+ V+ Q P +LEEA+
Sbjct: 153 ACRRTSTVEDYQDRFQALLPRAGRLEEAQQVQLFTGGLLPPLSLQVQQQKPASLEEAM 210


>tr|Q3C0I2|Q3C0I2_LOTJA Putative uncharacterized protein OS=Lotus
japonicus PE=4 SV=1
Length = 1508

Score = 37.4 bits (85), Expect = 0.40
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 4/127 (3%)
Frame = +2

Query: 119 RALQISLTMEGKAYKWWMSLKEKNIVPQSWATF---LRLCFAKEF-LPTNDADRNWTAWD 286
R S+ M+ +++W+ L++ + +W F LR F EF P + R
Sbjct: 112 RVAVASIAMDESSFRWFQGLEQGTVGRVTWPEFAAALRTRFGVEFESPMEELKR------ 165

Query: 287 TCSMHQYPSLLEYISHYRDVILKLEGLDTFQQVRGLIRGLTPELTKHVKTQDPKTLEEAI 466
+ Q +L EY + ++ + E L +++ + GL PEL VK P+TL EA+
Sbjct: 166 ---LVQQGNLEEYHEAFDNLACRTE-LSESLKLQCYLGGLNPELCTGVKMFGPRTLLEAM 221

Query: 467 VKAHIHD 487
A + +
Sbjct: 222 RIAKLQE 228