BP915568 |
Clone id |
YMU001_000073_B08 |
Library |
YMU01 |
Length |
518 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000073_B08. |
Accession |
BP915568 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ACAAAGTGCACTTTTATTCATTTAGCAATCTTTATTGAAGGATAAGACGTGTCAACGACA TGCTGACCACTTCAGGTAAGCTTTTACATAGAATGGTGCTGATTGTTCAGCTCATCTACA AGCTCACTCACAAGGAAACGGGAGTGTATGCATAGGATGTGTAGGTCTAGACTGAGTTTA TAAACAGCTTCCAAAGAGGAGCTTCGCTTCTACTTTATGCTACCTCAAACATGCTCCAAA TCGCTTCTCGCACGTCATCCATCAAACTAGAACGTCCTGCTTCTGCACCTCCATTCTCTC TCAGTGCCTCTTCTTCATCTCCAGCTTGCCCATCTCGAGGAGCCCGGCTGCGTGGAGGCA GCAGGATTGCCGTGTGTCGACGACTGCTTTCCTCATGCACACGCTTGTCCAGCTCCTTAC TTATCTTGAACATTCCCATTCTCATTTCCGGCCTCATCATATTGAACACTGAATCCTTGC CTGCAAGGTGCATCGATATTGGCATGTGGCTATTCATG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8KD63 |
Definition |
sp|Q8KD63|HSLU_CHLTE ATP-dependent hsl protease ATP-binding subunit hslU OS=Chlorobium tepidum |
Align length |
71 |
Score (bit) |
32.7 |
E-value |
1.0 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915568|Adiantum capillus-veneris mRNA, clone: YMU001_000073_B08. (518 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q8KD63|HSLU_CHLTE ATP-dependent hsl protease ATP-binding subu... 33 1.0 sp|Q5FPT6|GLND_GLUOX [Protein-PII] uridylyltransferase OS=Glucon... 32 1.4 sp|Q5R8E2|KLC3_PONAB Kinesin light chain 3 OS=Pongo abelii GN=KL... 32 1.8 sp|Q6P597|KLC3_HUMAN Kinesin light chain 3 OS=Homo sapiens GN=KL... 32 1.8 sp|Q4ADK7|CFDP1_CAMDR Craniofacial development protein 1 OS=Came... 30 5.2 sp|P70390|SHOX2_MOUSE Short stature homeobox protein 2 OS=Mus mu... 30 6.8 sp|O60902|SHOX2_HUMAN Short stature homeobox protein 2 OS=Homo s... 30 6.8 sp|O80765|PANK1_ARATH Pantothenate kinase 1 OS=Arabidopsis thali... 30 8.8 sp|Q02897|GLUB2_ORYSJ Glutelin type-B 2 OS=Oryza sativa subsp. j... 30 8.8 sp|Q60FC2|CFDP1_TRAJA Craniofacial development protein 1 OS=Trag... 30 8.8
>sp|Q8KD63|HSLU_CHLTE ATP-dependent hsl protease ATP-binding subunit hslU OS=Chlorobium tepidum GN=hslU PE=3 SV=1 Length = 491
Score = 32.7 bits (73), Expect = 1.0 Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 4/71 (5%) Frame = -2
Query: 481 GKDSVFNMMRPEMRMGMFKISKELDKRVHEESS----RRHTAILLPPRSRAPRDGQAGDE 314 G+D V +M+R + + + E + V E+++ R ILLPP S GDE Sbjct: 109 GRD-VESMIRDLVEQAVAMVRSEKTEEVREKAALLVEERLLDILLPPVSGLEESEHVGDE 167
Query: 313 EEALRENGGAE 281 EEA+ G AE Sbjct: 168 EEAVVVEGDAE 178
>sp|Q5FPT6|GLND_GLUOX [Protein-PII] uridylyltransferase OS=Gluconobacter oxydans GN=glnD PE=3 SV=1 Length = 949
Score = 32.3 bits (72), Expect = 1.4 Identities = 23/68 (33%), Positives = 30/68 (44%) Frame = -2
Query: 436 GMFKISKELDKRVHEESSRRHTAILLPPRSRAPRDGQAGDEEEALRENGGAEAGRSSLMD 257 G I K ++ H +SRR AI +PP R D A D + NG R L+ Sbjct: 829 GRLDIRKGIEDASHHSTSRRMRAIHVPP--RVVIDNTASDRHTVIEVNG---RDRPGLLH 883
Query: 256 DVREAIWS 233 DV A+ S Sbjct: 884 DVTSALSS 891
>sp|Q5R8E2|KLC3_PONAB Kinesin light chain 3 OS=Pongo abelii GN=KLC3 PE=2 SV=1 Length = 504
Score = 32.0 bits (71), Expect = 1.8 Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 1/76 (1%) Frame = -2
Query: 463 NMMRPEMRMGMFKISKELDKRV-HEESSRRHTAILLPPRSRAPRDGQAGDEEEALRENGG 287 N+ ++ ++ ++EL K + H+E LP AP G AGD E+ALR Sbjct: 380 NLASAYLKQNKYQQAEELYKEILHKED--------LPAPLGAPNTGTAGDAEQALR---- 427
Query: 286 AEAGRSSLMDDVREAI 239 RSS + +RE+I Sbjct: 428 ----RSSSLSKIRESI 439
>sp|Q6P597|KLC3_HUMAN Kinesin light chain 3 OS=Homo sapiens GN=KLC3 PE=1 SV=2 Length = 504
Score = 32.0 bits (71), Expect = 1.8 Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 1/76 (1%) Frame = -2
Query: 463 NMMRPEMRMGMFKISKELDKRV-HEESSRRHTAILLPPRSRAPRDGQAGDEEEALRENGG 287 N+ ++ ++ ++EL K + H+E LP AP G AGD E+ALR Sbjct: 380 NLASAYLKQNKYQQAEELYKEILHKED--------LPAPLGAPNTGTAGDAEQALR---- 427
Query: 286 AEAGRSSLMDDVREAI 239 RSS + +RE+I Sbjct: 428 ----RSSSLSKIRESI 439
>sp|Q4ADK7|CFDP1_CAMDR Craniofacial development protein 1 OS=Camelus dromedarius GN=CFDP1 PE=2 SV=1 Length = 297
Score = 30.4 bits (67), Expect = 5.2 Identities = 19/80 (23%), Positives = 36/80 (45%) Frame = -2
Query: 409 DKRVHEESSRRHTAILLPPRSRAPRDGQAGDEEEALRENGGAEAGRSSLMDDVREAIWSM 230 +++ + ++ A +P R R +EE+A E+GG+ + + + I + Sbjct: 42 EEQTQKTKGKKRKAQSIPARKRKQGLSLEEEEEDANEESGGSSSEEEDAAAEQEKGIGA- 100
Query: 229 FEVA*SRSEAPLWKLFINSV 170 E A + E LW F+N V Sbjct: 101 -EDARKKKEDELWASFLNDV 119
>sp|P70390|SHOX2_MOUSE Short stature homeobox protein 2 OS=Mus musculus GN=Shox2 PE=2 SV=1 Length = 331
Score = 30.0 bits (66), Expect = 6.8 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%) Frame = +2
Query: 359 QQD--CRVSTTAFLMHTLVQLLTYLEHSHSHFRPHHIEH 469 QQD C V+ +F + +QL + + H+H H PH H Sbjct: 233 QQDSHCNVTPLSFQVQAQLQLDSAVAHAHHHLHPHLAAH 271
>sp|O60902|SHOX2_HUMAN Short stature homeobox protein 2 OS=Homo sapiens GN=SHOX2 PE=2 SV=4 Length = 331
Score = 30.0 bits (66), Expect = 6.8 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%) Frame = +2
Query: 359 QQD--CRVSTTAFLMHTLVQLLTYLEHSHSHFRPHHIEH 469 QQD C V+ +F + +QL + + H+H H PH H Sbjct: 233 QQDSHCNVTPLSFQVQAQLQLDSAVAHAHHHLHPHLAAH 271
>sp|O80765|PANK1_ARATH Pantothenate kinase 1 OS=Arabidopsis thaliana GN=COAA PE=2 SV=2 Length = 383
Score = 29.6 bits (65), Expect = 8.8 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 2/34 (5%) Frame = +2
Query: 419 TYLEHSHSHFRPHH--IEH*ILACKVHRYWHVAI 514 +Y + SH+ +PHH ++ IL C H + H+ + Sbjct: 333 SYNDQSHNDLKPHHHTVQRAILNCSGHNFRHIPV 366
>sp|Q02897|GLUB2_ORYSJ Glutelin type-B 2 OS=Oryza sativa subsp. japonica GN=GLUB2 PE=2 SV=2 Length = 495
Score = 29.6 bits (65), Expect = 8.8 Identities = 13/41 (31%), Positives = 22/41 (53%) Frame = -2
Query: 490 HLAGKDSVFNMMRPEMRMGMFKISKELDKRVHEESSRRHTA 368 HLAGK+SVF + ++ ++IS+E + + H A Sbjct: 432 HLAGKNSVFRALPVDVVANAYRISREQARSIKNNRGEEHGA 472
>sp|Q60FC2|CFDP1_TRAJA Craniofacial development protein 1 OS=Tragulus javanicus GN=CFDP1 PE=2 SV=1 Length = 298
Score = 29.6 bits (65), Expect = 8.8 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 4/86 (4%) Frame = -2
Query: 415 ELDKRVHEESSRRHTAILLPPRSRAPRDG----QAGDEEEALRENGGAEAGRSSLMDDVR 248 ++++ H + A PR R + G + DEE+A RE+GG+ + + Sbjct: 40 DVEEETHIIKGTKRKAERFMPRKR--KQGGLSLEEEDEEDAGRESGGSGSEEEDTATEQE 97
Query: 247 EAIWSMFEVA*SRSEAPLWKLFINSV 170 E S E A + E LW F+N V Sbjct: 98 EGTES--EDARKKKEDELWASFLNDV 121
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9LQQ3 |
Definition |
tr|Q9LQQ3|Q9LQQ3_ARATH F24B9.13 protein (At1g07750/F24B9_13) (Putative globulin protein) OS=Arabidopsis thaliana |
Align length |
50 |
Score (bit) |
39.7 |
E-value |
0.091 |
Report |
|