BP915489
Clone id YMU001_000072_C03
Library
Length 508
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000072_C03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AAAGCAGATTGGAGTCTCAGGCATCCAATCACAAACACCCATACTTAGCCATCACCTTGT
ATGGCAAGGTGTAAACTCATACTAAATCTGCAAGAGAAATTGCACTGACAGTGCAAAAAA
TTACAGAAACAATAAAGTCCATGAATTTGCATGCCGCTCCAAATAAATTTGTGTTAAACA
CTAGGGCCCATAACACCTAGTGTGCATGCATTAACACAAACATATCCGAACCGCAATTCC
ATGACGGAGACTTTCCACTATACTTACGTGAAAATCTTGCAACAAAAGTTGGACCATAAT
AGAATGTGACAACCCGGTCACACCTAGGAACCAACCATGAGACCTTCTCATGAACGTAGC
ATACTTTGCTATATGTAGAAACAACCCTCCGTGTAAGGTGGTTTCACAGCACTTGTAATC
ACAACAAGTCTGTACTTAGTACCCGACAATTTTTGGCCACTGAAATTGTATCTGATATTG
TGTGCTTCGAATGGTCTAATGAACGGAT
■■Homology search results ■■ -
sp_hit_id A1JKV8
Definition sp|A1JKV8|YEGS_YERE8 Probable lipid kinase yegS-like OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081)
Align length 43
Score (bit) 31.6
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915489|Adiantum capillus-veneris mRNA, clone:
YMU001_000072_C03.
(508 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A1JKV8|YEGS_YERE8 Probable lipid kinase yegS-like OS=Yersinia... 32 2.2

>sp|A1JKV8|YEGS_YERE8 Probable lipid kinase yegS-like OS=Yersinia
enterocolitica serotype O:8 / biotype 1B (strain 8081)
GN=YE1099 PE=3 SV=1
Length = 296

Score = 31.6 bits (70), Expect = 2.2
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = -3

Query: 506 PFIRPFEAHNIRYNFSGQKLSGTKYRLVVITSAVK---PPYTE 387
P++ H+I +N G+ LSG +R+ VI +A++ PP E
Sbjct: 251 PWLEITAPHDITFNLDGEPLSGKNFRIEVIPNAIQCRLPPNCE 293


tr_hit_id Q6UVU7
Definition tr|Q6UVU7|Q6UVU7_PSEAK NADH-ubiquinone oxidoreductase chain 3 OS=Pseudendoclonium akinetum
Align length 75
Score (bit) 36.6
E-value 0.72
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915489|Adiantum capillus-veneris mRNA, clone:
YMU001_000072_C03.
(508 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q6UVU7|Q6UVU7_PSEAK NADH-ubiquinone oxidoreductase chain 3 OS... 37 0.72
tr|B2W5F4|B2W5F4_PYRTR Membrane transporter OS=Pyrenophora triti... 34 4.7
tr|Q4N8R1|Q4N8R1_THEPA Putative uncharacterized protein OS=Theil... 33 6.1
tr|Q9LIA9|Q9LIA9_ARATH Genomic DNA, chromosome 3, P1 clone: MUO1... 33 7.8

>tr|Q6UVU7|Q6UVU7_PSEAK NADH-ubiquinone oxidoreductase chain 3
OS=Pseudendoclonium akinetum GN=nad3 PE=3 SV=1
Length = 117

Score = 36.6 bits (83), Expect = 0.72
Identities = 21/75 (28%), Positives = 35/75 (46%)
Frame = -1

Query: 307 TFYYGPTFVARFSRKYSGKSPSWNCGSDMFVLMHAH*VLWALVFNTNLFGAACKFMDFIV 128
T + G F+ R YS K+ S+ CG D F + F+ + A F+ +
Sbjct: 19 TIFSGAAFLVAVRRTYSEKTSSYECGFDPFDDARSR-------FDVRFYLVALLFLIMDL 71

Query: 127 SVIFCTVSAISLADL 83
++FC +I+LAD+
Sbjct: 72 EILFCFPYSIALADI 86


>tr|B2W5F4|B2W5F4_PYRTR Membrane transporter OS=Pyrenophora
tritici-repentis (strain Pt-1C-BFP) GN=PTRG_04854 PE=4
SV=1
Length = 611

Score = 33.9 bits (76), Expect = 4.7
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = -2

Query: 402 TTLHGGLFLHIAKYATFMRRSHGWFLGVTGLSH-SIMVQLLLQDFHVSIVESLRHGIAVR 226
+ +HG LFL A Y ++ GW GV L +I+V +++ +V++V+ R+ V
Sbjct: 405 SVVHGTLFLLFAAYPIVFQQVRGWPQGVASLPFLAIIVGIMISLVYVALVDQKRYARVVF 464

Query: 225 IC 220
C
Sbjct: 465 RC 466


>tr|Q4N8R1|Q4N8R1_THEPA Putative uncharacterized protein
OS=Theileria parva GN=TP01_0403 PE=4 SV=1
Length = 581

Score = 33.5 bits (75), Expect = 6.1
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = -2

Query: 384 LFLHIAKYATFMRRSHGWFL---GVTGLSHSIMVQLLLQDFH 268
LFL I + F+ S GWF+ GVTG S S++ + D H
Sbjct: 202 LFLSITHFILFLAESLGWFIMIYGVTGFSCSVLWLSIYNDLH 243


>tr|Q9LIA9|Q9LIA9_ARATH Genomic DNA, chromosome 3, P1 clone: MUO10
OS=Arabidopsis thaliana PE=4 SV=1
Length = 384

Score = 33.1 bits (74), Expect = 7.8
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +3

Query: 57 LYGKV*THTKSAREIALTVQK--ITETIKSMNLHAAPNKFVLNTRAHNT*CACINTNISE 230
L G H + RE+A T + + ++ ++ + + P+ F ++ C + + SE
Sbjct: 145 LGGHTKLHRSTKRELASTQDENSLLDSSEAKKIVSQPSSFKVSQEEKFLHCVELKQDFSE 204

Query: 231 PQFHDGDFPLYLRENLATK 287
P H G P LR L TK
Sbjct: 205 PLSHSGALPSTLRSKLQTK 223