BP915378 |
Clone id |
YMU001_000070_G09 |
Library |
YMU01 |
Length |
525 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000070_G09. |
Accession |
BP915378 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CAGACACACACACACTAGCTTCTAAGTTTGACACGCACTGTCTTCCTTTGTTTTTCACAG ATACAACACTGACACTCTAATGCCAGCGGACCATGCAGAGCCCCCTCTCCAATTTTCTCC ACCGCCGCTCCACCTCCTCCCCTTCTTCCCTTCTCACTTTAGAGCTCTCCCCACCTTCCA GCTCCACAGGGGAAGCTGGCACCGACAGTACGCCCCCCTTTGATTGCGGCTAACGACACC GACGCCGCATTCTCCGATGCGCTTCACGGTGATGACATCCTTTATGGACGATTCAGCGAT GCACATGTGCTGGATGTTGATTATGCAGGCAGCCATAGCCCCTTTCCAGGGACACCGAGC TCCCATCGGCGCTCCTTGGAATCTCCTTTCCCCTCTCCTTACTCTCTCGATGTGCCCCTT TCCGCCGCAGGTGCCTACTTATGTACCCTGACTATCTCCATCAAAGCCTCCTCCCTCTGC CTCTCTGGTGGCCTTCTCTACGCAGCGCTCGACTCTGGCGACATC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q73XZ6 |
Definition |
sp|Q73XZ6|DNAJ1_MYCPA Chaperone protein dnaJ 1 OS=Mycobacterium paratuberculosis |
Align length |
66 |
Score (bit) |
34.3 |
E-value |
0.38 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915378|Adiantum capillus-veneris mRNA, clone: YMU001_000070_G09. (525 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q73XZ6|DNAJ1_MYCPA Chaperone protein dnaJ 1 OS=Mycobacterium ... 34 0.38 sp|Q9I8M6|SPIB_PALPA Transcription factor Spi-B-like OS=Paleosuc... 34 0.49 sp|Q49762|DNAJ2_MYCLE Chaperone protein dnaJ 2 OS=Mycobacterium ... 32 2.4 sp|P21522|ROA1_SCHAM Heterogeneous nuclear ribonucleoprotein A1,... 30 5.4 sp|P63966|DNAJ2_MYCTU Chaperone protein dnaJ 2 OS=Mycobacterium ... 30 5.4 sp|P63967|DNAJ2_MYCBO Chaperone protein dnaJ 2 OS=Mycobacterium ... 30 5.4 sp|Q9H5J0|ZBTB3_HUMAN Zinc finger and BTB domain-containing prot... 30 7.1 sp|Q9V3C5|RIC1_DROME Protein RIC1 homolog OS=Drosophila melanoga... 30 7.1 sp|Q10978|PPSB_MYCTU Phenolpthiocerol synthesis polyketide synth... 30 7.1 sp|Q9W534|MOODY_DROME G-protein coupled receptor moody OS=Drosop... 30 7.1 sp|Q75AW4|LCMT2_ASHGO Leucine carboxyl methyltransferase 2 OS=As... 30 7.1 sp|O75121|MFA3L_HUMAN Microfibrillar-associated protein 3-like O... 30 9.2 sp|P20010|LIG_PHLRA Ligninase-3 OS=Phlebia radiata PE=3 SV=1 30 9.2
>sp|Q73XZ6|DNAJ1_MYCPA Chaperone protein dnaJ 1 OS=Mycobacterium paratuberculosis GN=dnaJ1 PE=3 SV=1 Length = 381
Score = 34.3 bits (77), Expect = 0.38 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Frame = -1
Query: 474 GGGFDGDSQGT*VGTCGGKGHIERVRRGERRFQGAPMGAR-CPWKGAMAACIINIQHMCI 298 G G +GDS TCGG+G ++ V +R G M +R CP + I + H C+ Sbjct: 150 GKGTNGDSAPVPCDTCGGRGEVQTV---QRSLLGQVMTSRPCPTCRGVGVVIPDPCHQCM 206
Query: 297 AESSIK 280 + ++ Sbjct: 207 GDGRVR 212
>sp|Q9I8M6|SPIB_PALPA Transcription factor Spi-B-like OS=Paleosuchus palpebrosus PE=2 SV=1 Length = 265
Score = 33.9 bits (76), Expect = 0.49 Identities = 20/55 (36%), Positives = 25/55 (45%) Frame = +1
Query: 286 GRFSDAHVLDVDYAGSHSPFPGTPSSHRRSLESPFPSPYSLDVPLSAAGAYLCTL 450 G+ + H + V Y H P+P PS SLE P P+P V GA TL Sbjct: 66 GQLAPLHTVTVPYG--HGPYPPAPSDAIYSLEGPLPAPSHCPVLPEEYGAQPYTL 118
>sp|Q49762|DNAJ2_MYCLE Chaperone protein dnaJ 2 OS=Mycobacterium leprae GN=dnaJ2 PE=3 SV=1 Length = 378
Score = 31.6 bits (70), Expect = 2.4 Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 3/84 (3%) Frame = -1
Query: 477 EGGGFDGDSQGT*VGTCGGKGHIERVRRGERRFQGAPMGAR-CPWKGAMAACIINIQHMC 301 +G G +GDS TCGG+G ++ V +R G + AR CP + I + C Sbjct: 145 QGKGTNGDSAPIPCDTCGGRGEVQTV---QRSLLGQMVTARPCPTCRGVGVVIPDPCCQC 201
Query: 300 IAESSI--KDVITVKRIGECGVGV 235 + + + + ITVK G G+ Sbjct: 202 VGDGRVRARREITVKIPSGVGDGM 225
>sp|P21522|ROA1_SCHAM Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog OS=Schistocerca americana GN=HNRNP PE=2 SV=1 Length = 342
Score = 30.4 bits (67), Expect = 5.4 Identities = 14/33 (42%), Positives = 15/33 (45%) Frame = -1
Query: 180 WKVGRALK*EGKKGRRWSGGGENWRGGSAWSAG 82 W+ GR G G RW GGG GG W G Sbjct: 234 WENGR-----GGGGDRWGGGGGGMGGGDRWGGG 261
>sp|P63966|DNAJ2_MYCTU Chaperone protein dnaJ 2 OS=Mycobacterium tuberculosis GN=dnaJ2 PE=3 SV=1 Length = 382
Score = 30.4 bits (67), Expect = 5.4 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Frame = -1
Query: 477 EGGGFDGDSQGT*VGTCGGKGHIERVRRGERRFQGAPMGAR-CPWKGAMAACIINIQHMC 301 +G G +GDS TCGG+G ++ V +R G + +R CP + I + C Sbjct: 149 QGKGTNGDSVPIPCDTCGGRGEVQTV---QRSLLGQMLTSRPCPTCRGVGVVIPDPCQQC 205
Query: 300 IAESSIK 280 + + I+ Sbjct: 206 MGDGRIR 212
>sp|P63967|DNAJ2_MYCBO Chaperone protein dnaJ 2 OS=Mycobacterium bovis GN=dnaJ2 PE=3 SV=1 Length = 382
Score = 30.4 bits (67), Expect = 5.4 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Frame = -1
Query: 477 EGGGFDGDSQGT*VGTCGGKGHIERVRRGERRFQGAPMGAR-CPWKGAMAACIINIQHMC 301 +G G +GDS TCGG+G ++ V +R G + +R CP + I + C Sbjct: 149 QGKGTNGDSVPIPCDTCGGRGEVQTV---QRSLLGQMLTSRPCPTCRGVGVVIPDPCQQC 205
Query: 300 IAESSIK 280 + + I+ Sbjct: 206 MGDGRIR 212
>sp|Q9H5J0|ZBTB3_HUMAN Zinc finger and BTB domain-containing protein 3 OS=Homo sapiens GN=ZBTB3 PE=2 SV=1 Length = 574
Score = 30.0 bits (66), Expect = 7.1 Identities = 16/45 (35%), Positives = 20/45 (44%) Frame = +1
Query: 304 HVLDVDYAGSHSPFPGTPSSHRRSLESPFPSPYSLDVPLSAAGAY 438 H L D + PG HR + SP P+P SL PL + Y Sbjct: 413 HFLPTDPHLPYHLLPGAGQYHRGLVTSPLPAPASLHEPLYLSSEY 457
>sp|Q9V3C5|RIC1_DROME Protein RIC1 homolog OS=Drosophila melanogaster GN=CG9063 PE=1 SV=1 Length = 1429
Score = 30.0 bits (66), Expect = 7.1 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = +1
Query: 262 LHGDDILYGRFSDAHVLDVDYAGSHSPFPGT 354 L GDD LY + + L++ YAGSH FP + Sbjct: 420 LQGDDCLY--LNQGNNLELTYAGSHGTFPSS 448
>sp|Q10978|PPSB_MYCTU Phenolpthiocerol synthesis polyketide synthase ppsB OS=Mycobacterium tuberculosis GN=ppsB PE=3 SV=2 Length = 1538
Score = 30.0 bits (66), Expect = 7.1 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Frame = +1
Query: 205 TVRPPLIAANDTDAAFSDALHG-DDILYGRFSDAHVLDVDYA 327 ++ PP +AA AA DAL G D++LY +LD++ A Sbjct: 986 SLSPPALAAGSDPAALLDALRGVDNVLYAPPVPGELLDIESA 1027
>sp|Q9W534|MOODY_DROME G-protein coupled receptor moody OS=Drosophila melanogaster GN=moody PE=2 SV=2 Length = 670
Score = 30.0 bits (66), Expect = 7.1 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 7/58 (12%) Frame = +1
Query: 325 AGSHSPFPGTPSSH-RRSLESPFPSPYSLD------VPLSAAGAYLCTLTISIKASSL 477 AGS +P P TP+ H +++SP + Y +D P S +G + T+SI S L Sbjct: 604 AGSSAPKPATPTPHIYMNVDSPKRNQYYMDRNTNAVAPESDSGPANTSATVSISGSKL 661
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7ASM0 |
Definition |
tr|A7ASM0|A7ASM0_BABBO Cell division protein metalloprotease FtsH, putative OS=Babesia bovis |
Align length |
69 |
Score (bit) |
36.2 |
E-value |
1.0 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915378|Adiantum capillus-veneris mRNA, clone: YMU001_000070_G09. (525 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7ASM0|A7ASM0_BABBO Cell division protein metalloprotease Fts... 36 1.0 tr|B4SQ83|B4SQ83_STRM5 TonB-dependent siderophore receptor OS=St... 36 1.4 tr|Q98KM8|Q98KM8_RHILO Mlr1403 protein OS=Rhizobium loti GN=mlr1... 35 2.3 tr|A4T2C5|A4T2C5_MYCGI Chaperone protein DnaJ OS=Mycobacterium g... 35 3.0 tr|A0QEA4|A0QEA4_MYCA1 Chaperone protein DnaJ OS=Mycobacterium a... 34 4.0 tr|A0PTU1|A0PTU1_MYCUA Chaperone protein DnaJ2 OS=Mycobacterium ... 34 4.0 tr|B6KPF4|B6KPF4_TOXGO Putative uncharacterized protein OS=Toxop... 34 4.0 tr|B1KB49|B1KB49_BURCC Aldose 1-epimerase OS=Burkholderia cenoce... 34 5.2 tr|A1TBR7|A1TBR7_MYCVP Chaperone protein DnaJ OS=Mycobacterium v... 34 5.2 tr|A0R0T8|A0R0T8_MYCS2 Chaperone protein DnaJ OS=Mycobacterium s... 34 5.2 tr|A9SQI5|A9SQI5_PHYPA Predicted protein OS=Physcomitrella paten... 34 5.2 tr|B2HM79|B2HM79_MYCMM Chaperone protein DnaJ2 OS=Mycobacterium ... 33 6.7 tr|Q0SHB6|Q0SHB6_RHOSR Chaperone protein OS=Rhodococcus sp. (str... 33 8.8 tr|Q020F0|Q020F0_SOLUE Putative uncharacterized protein OS=Solib... 27 9.5
>tr|A7ASM0|A7ASM0_BABBO Cell division protein metalloprotease FtsH, putative OS=Babesia bovis GN=BBOV_IV011870 PE=4 SV=1 Length = 658
Score = 36.2 bits (82), Expect = 1.0 Identities = 22/69 (31%), Positives = 34/69 (49%) Frame = +1
Query: 199 APTVRPPLIAANDTDAAFSDALHGDDILYGRFSDAHVLDVDYAGSHSPFPGTPSSHRRSL 378 A T RPPL A ++A++ + D Y +D+ + + G H+ F P SH R+ Sbjct: 4 ANTRRPPLGGAQYSNASYDE----QDYAYEYDNDSSAITRPFFGKHAGFAQMPYSHDRNG 59
Query: 379 ESPFPSPYS 405 E+P P S Sbjct: 60 ETPMTDPGS 68
>tr|B4SQ83|B4SQ83_STRM5 TonB-dependent siderophore receptor OS=Stenotrophomonas maltophilia (strain R551-3) GN=Smal_1326 PE=3 SV=1 Length = 741
Score = 35.8 bits (81), Expect = 1.4 Identities = 20/65 (30%), Positives = 32/65 (49%) Frame = -1
Query: 234 VSRNQRGAYCRCQLPLWSWKVGRALK*EGKKGRRWSGGGENWRGGSAWSAGIRVSVLYL* 55 VSRN +G +P+ +++ + + G +GR W GGG W+ G WS + +L Sbjct: 614 VSRNAQGVRQNTVVPVDLFRLNASWRPGGAEGRFWLGGGATWQSG-IWSLSNKPRADFLT 672
Query: 54 KTKED 40 K D Sbjct: 673 SGKRD 677
>tr|Q98KM8|Q98KM8_RHILO Mlr1403 protein OS=Rhizobium loti GN=mlr1403 PE=4 SV=1 Length = 199
Score = 35.0 bits (79), Expect = 2.3 Identities = 17/35 (48%), Positives = 21/35 (60%) Frame = -1
Query: 186 WSWKVGRALK*EGKKGRRWSGGGENWRGGSAWSAG 82 W W+ R+ G GRRW+GGG NW GG W+ G Sbjct: 67 WRWR--RSGNWNG--GRRWNGGG-NWNGGGNWNRG 96
>tr|A4T2C5|A4T2C5_MYCGI Chaperone protein DnaJ OS=Mycobacterium gilvum (strain PYR-GCK) GN=Mflv_2702 PE=3 SV=1 Length = 381
Score = 34.7 bits (78), Expect = 3.0 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Frame = -1
Query: 474 GGGFDGDSQGT*VGTCGGKGHIERVRRGERRFQGAPMGAR-CPWKGAMAACIINIQHMCI 298 G G GDS T TCGG+G ++ V +R G M +R CP G + I N + C Sbjct: 146 GKGTHGDSTPTSCDTCGGRGEVQTV---QRSLLGQVMTSRPCPVCGGVGEVIPNPCNRCG 202
Query: 297 AESSIK 280 + ++ Sbjct: 203 GDGRVR 208
>tr|A0QEA4|A0QEA4_MYCA1 Chaperone protein DnaJ OS=Mycobacterium avium (strain 104) GN=dnaJ PE=3 SV=1 Length = 381
Score = 34.3 bits (77), Expect = 4.0 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Frame = -1
Query: 474 GGGFDGDSQGT*VGTCGGKGHIERVRRGERRFQGAPMGAR-CPWKGAMAACIINIQHMCI 298 G G +GDS TCGG+G ++ V +R G M +R CP + I + H C+ Sbjct: 150 GKGTNGDSAPVPCDTCGGRGEVQTV---QRSLLGQVMTSRPCPTCRGVGVVIPDPCHQCM 206
Query: 297 AESSIK 280 + ++ Sbjct: 207 GDGRVR 212
>tr|A0PTU1|A0PTU1_MYCUA Chaperone protein DnaJ2 OS=Mycobacterium ulcerans (strain Agy99) GN=dnaJ2 PE=3 SV=1 Length = 378
Score = 34.3 bits (77), Expect = 4.0 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Frame = -1
Query: 477 EGGGFDGDSQGT*VGTCGGKGHIERVRRGERRFQGAPMGAR-CPWKGAMAACIINIQHMC 301 +G G +GDS TCGG+G ++ V +R G + +R CP + I + H C Sbjct: 145 QGKGTNGDSASIPCDTCGGRGEVQTV---QRSLLGQMLTSRPCPTCRGVGVVIPDPCHQC 201
Query: 300 IAESSIK 280 + + ++ Sbjct: 202 MGDGRVR 208
>tr|B6KPF4|B6KPF4_TOXGO Putative uncharacterized protein OS=Toxoplasma gondii ME49 GN=TGME49_009780 PE=4 SV=1 Length = 166
Score = 34.3 bits (77), Expect = 4.0 Identities = 19/64 (29%), Positives = 28/64 (43%) Frame = -1
Query: 393 GERRFQGAPMGARCPWKGAMAACIINIQHMCIAESSIKDVITVKRIGECGVGVVSRNQRG 214 GE R Q P+GAR PW+G +Q D + + RI C + R+ + Sbjct: 2 GETRMQTRPVGARPPWEGEENERRGGLQRPAALNGFDVDAVLLVRIDSCHQLTLPRDWKA 61
Query: 213 AYCR 202 A C+ Sbjct: 62 AACK 65
>tr|B1KB49|B1KB49_BURCC Aldose 1-epimerase OS=Burkholderia cenocepacia (strain MC0-3) GN=Bcenmc03_6331 PE=4 SV=1 Length = 362
Score = 33.9 bits (76), Expect = 5.2 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%) Frame = -1
Query: 378 QGAPMGARCPWKGAMAACIINIQHMCIAESSIKDVITVKRIGECGVG---VVSRNQRG 214 Q AP+GAR W A A H + ++ ++V V RI + G +VS +QRG Sbjct: 239 QSAPLGARLDWPHAQLARARGFDHCYVVDNGAREVRPVARIYDPESGRELIVSTDQRG 296
>tr|A1TBR7|A1TBR7_MYCVP Chaperone protein DnaJ OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=Mvan_3836 PE=3 SV=1 Length = 383
Score = 33.9 bits (76), Expect = 5.2 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Frame = -1
Query: 474 GGGFDGDSQGT*VGTCGGKGHIERVRRGERRFQGAPMGAR-CPWKGAMAACIINIQHMCI 298 G G GDS TCGG+G I+ V +R G M +R CP G + I N + C Sbjct: 147 GKGTHGDSTPVTCDTCGGRGEIQTV---QRSLLGQVMTSRPCPVCGGVGEVIPNPCNRCS 203
Query: 297 AESSIK 280 + ++ Sbjct: 204 GDGRVR 209
>tr|A0R0T8|A0R0T8_MYCS2 Chaperone protein DnaJ OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=dnaJ PE=4 SV=1 Length = 381
Score = 33.9 bits (76), Expect = 5.2 Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 12/90 (13%) Frame = -1
Query: 513 VERCVEKATREA-----------EGGGFDGDSQGT*VGTCGGKGHIERVRRGERRFQGAP 367 +E C T+E G G +G+S TCGG+G I+ V +R G Sbjct: 122 LEECATGVTKEVTVETAVLCDLCHGKGTNGNSSPATCDTCGGRGEIQTV---QRSLLGQV 178
Query: 366 MGAR-CPWKGAMAACIINIQHMCIAESSIK 280 M +R CP G + I + H C + ++ Sbjct: 179 MTSRPCPVCGGVGEVIPDPCHRCGGDGRVR 208
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