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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915359
Clone id YMU001_000070_F02
Library
Length 555
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000070_F02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CGACAAGTGGAGAGAGAAGGTTCTCTACTGATATTTACCGCCTTTAGTACCAAGTAGATC
CTTTGTTGCCAGCATTCAGAATTGCCCACCAACAGACTTCTGCACCTTTGGAGTCAGATG
GGTCATCTTCGGTTTTCTCCTCAGGGCCCTTCTCTGGTTTTGCTTTTGACAACGAGGTGT
TTTCAAGGTCTGCTGTATTTTCAGAAGATCTTCACGAGGGGAGGTAAAAAAGCCGGTACT
TCCCATTACAATCAAATCATAGGTAGTCTTGTATCTTTAATCAGTACTTAAAGCTTTTTT
TGAGAGCAACACATGTTGCTCTTCTCTTGCCAGTCATGAGCTTAGTCATAAACTTAAATT
TTTTGATTATTTCCTAAACCAAGAGGAGGAGCTCATCAACTGTGTTGTAATTCTTTTGGG
GGTCGGGTTTCTGTCTCCATCATGTAATAGTGGATCTGTGGCAAAGCAGAATTTTGTACT
ATTATTCATTCTTTGGGATGAACTGCAAGCTCCAAGATTGTTATATGGAGCCAATATATA
GTGGAGAAATGTGCT
■■Homology search results ■■ -
sp_hit_id O35817
Definition sp|O35817|AKA14_RAT A-kinase anchor protein 14 OS=Rattus norvegicus
Align length 36
Score (bit) 34.3
E-value 0.42
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915359|Adiantum capillus-veneris mRNA, clone:
YMU001_000070_F02.
         (555 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O35817|AKA14_RAT A-kinase anchor protein 14 OS=Rattus norvegi...    34   0.42 
sp|P42781|XPR6_YARLI Dibasic-processing endoprotease OS=Yarrowia...    33   1.2  
sp|Q9V460|SPT5H_DROME Transcription elongation factor SPT5 OS=Dr...    32   2.1  
sp|A1YFI3|GSC_SAGLB Homeobox protein goosecoid OS=Saguinus labia...    31   3.5  
sp|A2T7P4|GSC_PONPY Homeobox protein goosecoid OS=Pongo pygmaeus...    31   3.5  
sp|A2T733|GSC_PANTR Homeobox protein goosecoid OS=Pan troglodyte...    31   3.5  
sp|A1YG57|GSC_PANPA Homeobox protein goosecoid OS=Pan paniscus G...    31   3.5  
sp|P56915|GSC_HUMAN Homeobox protein goosecoid OS=Homo sapiens G...    31   3.5  
sp|A1YEY5|GSC_GORGO Homeobox protein goosecoid OS=Gorilla gorill...    31   3.5  
sp|P37178|PT1P_SALTY Phosphoenolpyruvate-protein phosphotransfer...    30   7.9  
sp|P41024|YLYA_BACMT Uncharacterized N-acetyltransferase in lysA...    30   8.0  
sp|A4IGL7|PXDN_XENTR Peroxidasin OS=Xenopus tropicalis GN=pxdn P...    30   8.0  
sp|Q82681|PHOSP_IHNVW Phosphoprotein OS=Infectious hematopoietic...    30   8.0  

>sp|O35817|AKA14_RAT A-kinase anchor protein 14 OS=Rattus norvegicus
           GN=Akap14 PE=2 SV=1
          Length = 502

 Score = 34.3 bits (77), Expect = 0.42
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -3

Query: 205 SENTADLENTSLSKAKPEKGPEEKTEDDPSDSKGAE 98
           ++    +ENTS +KAK  + PE K   +P DSK  E
Sbjct: 9   NQKAKTVENTSTAKAKKPEAPEPKNVTEPKDSKAVE 44


>sp|P42781|XPR6_YARLI Dibasic-processing endoprotease OS=Yarrowia
           lipolytica GN=XPR6 PE=3 SV=1
          Length = 976

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = -3

Query: 184 ENTSLSKAKPEKGPEEK---TEDDPSDSKGAEVCWWAILNAGNKGSTW 50
           E+    + KPE+ PEEK     D  SDS  +   WW  L+  +K S W
Sbjct: 811 EDKPSDEKKPEEKPEEKPVDNSDSSSDSSDSHTSWWPDLS--SKKSAW 856


>sp|Q9V460|SPT5H_DROME Transcription elongation factor SPT5
           OS=Drosophila melanogaster GN=Spt5 PE=1 SV=1
          Length = 1078

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 16/68 (23%), Positives = 35/68 (51%)
 Frame = -1

Query: 219 PREDLLKIQQTLKTPRCQKQNQRRALRRKPKMTHLTPKVQKSVGGQF*MLATKDLLGTKG 40
           PR D  +++  L+T   +  + +R  +R+P      P+  +++GG+  + +  D L  +G
Sbjct: 346 PRIDYTRMRGALRTTATESDDSKRKKKRRPAAKPFDPEAVRAIGGE--VHSDGDFLLFEG 403

Query: 39  GKYQ*RTF 16
            +Y  + F
Sbjct: 404 NRYSRKGF 411


>sp|A1YFI3|GSC_SAGLB Homeobox protein goosecoid OS=Saguinus labiatus
           GN=GSC PE=3 SV=1
          Length = 257

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 20/44 (45%), Positives = 21/44 (47%)
 Frame = -3

Query: 241 KYRLFYLPS*RSSENTADLENTSLSKAKPEKGPEEKTEDDPSDS 110
           K+R     S   SEN      TS SKA PEK  EE   D  SDS
Sbjct: 214 KWRRQKRSSSEESENAEKWNKTSSSKASPEKREEEGKSDLDSDS 257


>sp|A2T7P4|GSC_PONPY Homeobox protein goosecoid OS=Pongo pygmaeus
           GN=GSC PE=3 SV=1
          Length = 257

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 20/44 (45%), Positives = 21/44 (47%)
 Frame = -3

Query: 241 KYRLFYLPS*RSSENTADLENTSLSKAKPEKGPEEKTEDDPSDS 110
           K+R     S   SEN      TS SKA PEK  EE   D  SDS
Sbjct: 214 KWRRQKRSSSEESENAEKWNKTSSSKASPEKREEEGKSDLDSDS 257


>sp|A2T733|GSC_PANTR Homeobox protein goosecoid OS=Pan troglodytes
           GN=GSC PE=3 SV=1
          Length = 257

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 20/44 (45%), Positives = 21/44 (47%)
 Frame = -3

Query: 241 KYRLFYLPS*RSSENTADLENTSLSKAKPEKGPEEKTEDDPSDS 110
           K+R     S   SEN      TS SKA PEK  EE   D  SDS
Sbjct: 214 KWRRQKRSSSEESENAEKWNKTSSSKASPEKREEEGKSDLDSDS 257


>sp|A1YG57|GSC_PANPA Homeobox protein goosecoid OS=Pan paniscus
           GN=GSC PE=3 SV=1
          Length = 257

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 20/44 (45%), Positives = 21/44 (47%)
 Frame = -3

Query: 241 KYRLFYLPS*RSSENTADLENTSLSKAKPEKGPEEKTEDDPSDS 110
           K+R     S   SEN      TS SKA PEK  EE   D  SDS
Sbjct: 214 KWRRQKRSSSEESENAEKWNKTSSSKASPEKREEEGKSDLDSDS 257


>sp|P56915|GSC_HUMAN Homeobox protein goosecoid OS=Homo sapiens
           GN=GSC PE=1 SV=2
          Length = 257

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 20/44 (45%), Positives = 21/44 (47%)
 Frame = -3

Query: 241 KYRLFYLPS*RSSENTADLENTSLSKAKPEKGPEEKTEDDPSDS 110
           K+R     S   SEN      TS SKA PEK  EE   D  SDS
Sbjct: 214 KWRRQKRSSSEESENAEKWNKTSSSKASPEKREEEGKSDLDSDS 257


>sp|A1YEY5|GSC_GORGO Homeobox protein goosecoid OS=Gorilla gorilla
           gorilla GN=GSC PE=3 SV=1
          Length = 257

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 20/44 (45%), Positives = 21/44 (47%)
 Frame = -3

Query: 241 KYRLFYLPS*RSSENTADLENTSLSKAKPEKGPEEKTEDDPSDS 110
           K+R     S   SEN      TS SKA PEK  EE   D  SDS
Sbjct: 214 KWRRQKRSSSEESENAEKWNKTSSSKASPEKREEEGKSDLDSDS 257


>sp|P37178|PT1P_SALTY Phosphoenolpyruvate-protein phosphotransferase
           ptsP OS=Salmonella typhimurium GN=ptsP PE=3 SV=2
          Length = 748

 Score = 30.0 bits (66), Expect = 7.9
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +2

Query: 401 CVVILLGVGFLSPSCNSGSVAKQNFVLLFILWDELQ 508
           CV IL+G+G+   S N  SVA+  ++L  I +++ Q
Sbjct: 677 CVAILIGLGYRHLSMNGRSVARVKYLLRHIDFEDAQ 712
tr_hit_id A7Q0P3
Definition tr|A7Q0P3|A7Q0P3_VITVI Chromosome chr7 scaffold_42, whole genome shotgun sequence OS=Vitis vinifera
Align length 21
Score (bit) 38.5
E-value 0.24
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915359|Adiantum capillus-veneris mRNA, clone:
YMU001_000070_F02.
         (555 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7Q0P3|A7Q0P3_VITVI Chromosome chr7 scaffold_42, whole genome...    39   0.24 
tr|A5BHN7|A5BHN7_VITVI Putative uncharacterized protein OS=Vitis...    39   0.24 
tr|Q8L7V7|Q8L7V7_ARATH AT4g02010/T10M13_2 OS=Arabidopsis thalian...    35   2.7  
tr|O04245|O04245_ARATH Putative NAK-like ser/thr protein kinase ...    35   2.7  
tr|B0ERD4|B0ERD4_ENTDI Putative uncharacterized protein OS=Entam...    35   3.5  
tr|A4WE05|A4WE05_ENT38 PTSINtr with GAF domain, PtsP OS=Enteroba...    34   6.0  
tr|B7ZX23|B7ZX23_MAIZE Putative uncharacterized protein OS=Zea m...    33   7.8  

>tr|A7Q0P3|A7Q0P3_VITVI Chromosome chr7 scaffold_42, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00028126001
           PE=4 SV=1
          Length = 638

 Score = 38.5 bits (88), Expect = 0.24
 Identities = 17/21 (80%), Positives = 19/21 (90%)
 Frame = +3

Query: 162 AFDNEVFSRSAVFSEDLHEGR 224
           AFDN+  SR+AVFSEDLHEGR
Sbjct: 618 AFDNDNISRTAVFSEDLHEGR 638


>tr|A5BHN7|A5BHN7_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_041991 PE=4 SV=1
          Length = 707

 Score = 38.5 bits (88), Expect = 0.24
 Identities = 17/21 (80%), Positives = 19/21 (90%)
 Frame = +3

Query: 162 AFDNEVFSRSAVFSEDLHEGR 224
           AFDN+  SR+AVFSEDLHEGR
Sbjct: 687 AFDNDNISRTAVFSEDLHEGR 707


>tr|Q8L7V7|Q8L7V7_ARATH AT4g02010/T10M13_2 OS=Arabidopsis thaliana
           GN=At4g02010 PE=1 SV=1
          Length = 725

 Score = 35.0 bits (79), Expect = 2.7
 Identities = 15/21 (71%), Positives = 18/21 (85%)
 Frame = +3

Query: 162 AFDNEVFSRSAVFSEDLHEGR 224
           AFD+E  +R+ VFSEDLHEGR
Sbjct: 705 AFDHENITRTTVFSEDLHEGR 725


>tr|O04245|O04245_ARATH Putative NAK-like ser/thr protein kinase
           OS=Arabidopsis thaliana GN=T10M13.2 PE=2 SV=2
          Length = 707

 Score = 35.0 bits (79), Expect = 2.7
 Identities = 15/21 (71%), Positives = 18/21 (85%)
 Frame = +3

Query: 162 AFDNEVFSRSAVFSEDLHEGR 224
           AFD+E  +R+ VFSEDLHEGR
Sbjct: 687 AFDHENITRTTVFSEDLHEGR 707


>tr|B0ERD4|B0ERD4_ENTDI Putative uncharacterized protein
           OS=Entamoeba dispar SAW760 GN=EDI_240930 PE=4 SV=1
          Length = 465

 Score = 34.7 bits (78), Expect = 3.5
 Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
 Frame = +3

Query: 195 VFSEDLHEGR*KSRYFPLQSNHR*SCIF-NQYLKLFLRATHVALLLPVMSLVIN 353
           +F ++L E   +++YFPLQS       F N+Y KLFL      +L PV+ L+++
Sbjct: 68  MFEKELTENPPETKYFPLQSKLSLFITFYNEYSKLFLMDYLKHVLTPVLDLIVS 121


>tr|A4WE05|A4WE05_ENT38 PTSINtr with GAF domain, PtsP
           OS=Enterobacter sp. (strain 638) GN=Ent638_3271 PE=4
           SV=1
          Length = 748

 Score = 33.9 bits (76), Expect = 6.0
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = +2

Query: 401 CVVILLGVGFLSPSCNSGSVAKQNFVLLFILWDELQ 508
           CV IL+G+GF   S N  SVA+  ++L  I +DE Q
Sbjct: 677 CVAILIGLGFRHLSMNGRSVARVKYLLRHIDFDEAQ 712


>tr|B7ZX23|B7ZX23_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 750

 Score = 33.5 bits (75), Expect = 7.8
 Identities = 14/20 (70%), Positives = 16/20 (80%)
 Frame = +3

Query: 165 FDNEVFSRSAVFSEDLHEGR 224
           F+ E   R+AVFSEDLHEGR
Sbjct: 731 FETETIPRTAVFSEDLHEGR 750