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NBDC - LSDB Archive
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BP915353
Clone id YMU001_000070_E07
Library
Length 523
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000070_E07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TGCAGGTACTCGTCGGCCATTACATCTCCAGACATACCAAGAGGGGGTCCAACCTTACCA
TCACAGAGCGGTCAGAGTCTGTCTACTCACCAAAGAAAGCGAACTCATCATTCAAGTTAT
CATCTTTACCTGGCTCGTAGAAGTTTGAGCTTGTACCATCTTCGTCATCACCATAAGCCA
ACTCGGTGTCAGCATCTTCATCCACTGCCTTTGGCAATCTTCCTCGCGCATCCTAGAATC
CATTGCCTCTGTGATGTCTTCTCTCTTCAGACCCTGCATCCTCTTCGGCATTGGACTCTT
GCATCTACACAGCCGCTTTGGCTTCTTCTACATGCTCAACTTCACCATCCGCCACTTTTG
AATATACATCTGCAATCCCCTTCGCACCTTGGTCCTCTTCAATAAAATCCTCATCCTTGT
TGATGAGTCTACCTTCGATTTCCCCATAAGATGCATCATCGCCGGAACATCAATCAAGTT
TTCACGCTCCAACAAANCCATCTCCATTTTTTCTTTATCTGAG
■■Homology search results ■■ -
sp_hit_id P14599
Definition sp|P14599|A4_DROME Beta-amyloid-like protein OS=Drosophila melanogaster
Align length 49
Score (bit) 34.3
E-value 0.37
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915353|Adiantum capillus-veneris mRNA, clone:
YMU001_000070_E07.
         (523 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P14599|A4_DROME Beta-amyloid-like protein OS=Drosophila melan...    34   0.37 
sp|Q6YSF3|AN321_ORYSJ Acidic leucine-rich nuclear phosphoprotein...    33   0.63 
sp|Q6BS60|POB3_DEBHA FACT complex subunit POB3 OS=Debaryomyces h...    32   1.4  
sp|A1D731|NST1_NEOFI Stress response protein nst1 OS=Neosartorya...    32   2.4  
sp|Q07532|IWR1_YEAST Putative transcription factor IWR1 OS=Sacch...    32   2.4  
sp|Q5BBK4|ATG13_EMENI Autophagy-related protein 13 OS=Emericella...    32   2.4  
sp|Q89AH0|FABD_BUCBP Malonyl CoA-acyl carrier protein transacyla...    31   3.1  
sp|A5DXA0|NST1_LODEL Stress response protein NST1 OS=Lodderomyce...    31   4.1  
sp|Q0CP15|NST1_ASPTN Stress response protein nst1 OS=Aspergillus...    31   4.1  
sp|O82855|NORM_VIBPA Multidrug resistance protein norM OS=Vibrio...    30   5.3  
sp|Q9KRU4|NORM_VIBCH Multidrug resistance protein norM OS=Vibrio...    30   5.3  
sp|Q045P3|Y424_LACGA UPF0473 protein LGAS_0424 OS=Lactobacillus ...    30   7.0  
sp|Q0C807|CHZ1_ASPTN Histone H2A.Z-specific chaperone chz1 OS=As...    30   7.0  
sp|Q04870|T2FA_XENLA General transcription factor IIF subunit 1 ...    30   9.1  
sp|Q13370|PDE3B_HUMAN cGMP-inhibited 3',5'-cyclic phosphodiester...    30   9.1  
sp|Q79ZY2|OATA_STAAW O-acetyltransferase oatA OS=Staphylococcus ...    30   9.1  
sp|Q6G6A7|OATA_STAAS O-acetyltransferase oatA OS=Staphylococcus ...    30   9.1  
sp|Q6GDN2|OATA_STAAR O-acetyltransferase oatA OS=Staphylococcus ...    30   9.1  
sp|Q7A3D6|OATA_STAAN O-acetyltransferase oatA OS=Staphylococcus ...    30   9.1  
sp|Q99R71|OATA_STAAM O-acetyltransferase oatA OS=Staphylococcus ...    30   9.1  
sp|Q5HCY3|OATA_STAAC O-acetyltransferase oatA OS=Staphylococcus ...    30   9.1  
sp|Q2FV54|OATA_STAA8 O-acetyltransferase oatA OS=Staphylococcus ...    30   9.1  
sp|Q6IR70|KLRAQ_XENLA KLRAQ motif-containing protein 1 OS=Xenopu...    30   9.1  

>sp|P14599|A4_DROME Beta-amyloid-like protein OS=Drosophila
           melanogaster GN=Appl PE=1 SV=2
          Length = 887

 Score = 34.3 bits (77), Expect = 0.37
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -1

Query: 217 LPKAVDEDADTELAYGDDEDGTSSNFYEPGKDDNLNDEFAFFGE*TDSD 71
           +P A    A+ EL   D++D   SN+ +   +D+L+DE    G+  + D
Sbjct: 216 MPAAQINSANDELVMNDEDDSNDSNYSKDANEDDLDDEDDLMGDDEEDD 264


>sp|Q6YSF3|AN321_ORYSJ Acidic leucine-rich nuclear phosphoprotein
           32-related protein 1 OS=Oryza sativa subsp. japonica
           GN=Os07g0607800 PE=2 SV=1
          Length = 476

 Score = 33.5 bits (75), Expect = 0.63
 Identities = 35/138 (25%), Positives = 51/138 (36%), Gaps = 19/138 (13%)
 Frame = -1

Query: 463 GDDASYGEIEGRLINKDEDFIEEDQGAKGI---ADVYSKVADGXXXXXXXXXXXX*MQES 293
           GD+  Y E E    + +ED+ EED   + I    D    V +              ++E 
Sbjct: 252 GDEDEYVEEEDD--DDEEDYEEEDDLGEEIDEDGDDEDAVVEVHDVPSSSDEEEDGIEEE 309

Query: 292 NAEEDAGSEERRHHRGNGF*DARGRLPKAV----------------DEDADTELAYGDDE 161
           + EED   EE          ++ GR+  AV                DED + E+   D+E
Sbjct: 310 DEEEDEDEEEVEDDGEEAEPESSGRVALAVGDVGEEIDGHEHGEGEDEDENGEIGEEDEE 369

Query: 160 DGTSSNFYEPGKDDNLND 107
                  YE G DD+  D
Sbjct: 370 RLEDDRVYEEGNDDDEED 387


>sp|Q6BS60|POB3_DEBHA FACT complex subunit POB3 OS=Debaryomyces
           hansenii GN=POB3 PE=3 SV=1
          Length = 540

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
 Frame = -1

Query: 229 ARGRLPKAV------DEDADTEL-AYGDDEDGTSSNFYEPGKDDNLNDEFAFFGE*TDSD 71
           A+  L KA+      D+DAD ++ + GDD+D ++ + +  G D ++ +EF       DSD
Sbjct: 465 AKAMLAKAMNETADDDDDADVDMGSAGDDDDESADDDFNSGSDSDVAEEF-------DSD 517

Query: 70  RSV 62
            SV
Sbjct: 518 ASV 520


>sp|A1D731|NST1_NEOFI Stress response protein nst1 OS=Neosartorya
           fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181)
           GN=nst1 PE=3 SV=1
          Length = 1193

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = -1

Query: 259 RHHRGNG-F*DARGRLPKAVDEDADTELAYGDDEDGTSSNFYEPGKDDNLNDE 104
           +H R  G F  +RGR+ +  +ED D E  Y ++ED       EP  D+ L++E
Sbjct: 313 QHTRTQGQFHPSRGRIHELTEEDDDLEEDYDEEEDDGD----EPYSDEELDEE 361


>sp|Q07532|IWR1_YEAST Putative transcription factor IWR1
           OS=Saccharomyces cerevisiae GN=IWR1 PE=1 SV=2
          Length = 353

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = -1

Query: 208 AVDEDADTELAYGDDEDGTSSNFYEPGKDDNLNDEFAFFGE*TDSDRSVM 59
           A+DE++D   A  DDED    N+Y+       ND    + E  D DRS++
Sbjct: 189 ALDEESDPNEARSDDEDSNDENYYQ-------ND----YPEDEDDDRSIL 227


>sp|Q5BBK4|ATG13_EMENI Autophagy-related protein 13 OS=Emericella
            nidulans GN=atg13 PE=3 SV=1
          Length = 974

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 7/68 (10%)
 Frame = -1

Query: 298  ESNAEEDA-------GSEERRHHRGNGF*DARGRLPKAVDEDADTELAYGDDEDGTSSNF 140
            E  AE DA       G+E+RR   G G    R  LP+A   + D  L +   + G S   
Sbjct: 879  EREAERDANAGASHSGTEDRRG-TGRGSGGGRHNLPQAAQVEEDEPLLFAMSDFGASRRS 937

Query: 139  YEPGKDDN 116
            +E G+  N
Sbjct: 938  FEEGRQGN 945


>sp|Q89AH0|FABD_BUCBP Malonyl CoA-acyl carrier protein transacylase
           OS=Buchnera aphidicola subsp. Baizongia pistaciae
           GN=fabD PE=3 SV=1
          Length = 311

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +2

Query: 404 KILILVDESTFDFPIRCIIAGTSIKFSRSNKXISI 508
           K+L ++  +TF  PI  +I+ TS+KF  S + I I
Sbjct: 212 KLLYVLKHTTFKIPIYPVISSTSLKFQNSEQAIRI 246


>sp|A5DXA0|NST1_LODEL Stress response protein NST1 OS=Lodderomyces
           elongisporus GN=NST1 PE=3 SV=1
          Length = 1637

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -1

Query: 202 DEDADTELAYGDDEDGTSSNFYEPGKDDNLND 107
           DE+ D E  YGDDE+       E G+D+ L +
Sbjct: 760 DEEDDEEYEYGDDEEEEDEEDEEEGEDEELEE 791


>sp|Q0CP15|NST1_ASPTN Stress response protein nst1 OS=Aspergillus
           terreus (strain NIH 2624) GN=nst1 PE=3 SV=1
          Length = 1129

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = -1

Query: 259 RHHRGNG-F*DARGRLPKAVDEDADTELAYGDDEDGTSSNFYEPGKDDNLNDE 104
           +H R  G F  +RGR+ +  +++ D E  Y D+E+       EP  DD   DE
Sbjct: 255 QHTRTQGQFHPSRGRIHEITEDEEDLEEDYDDEEEDDD----EPYSDDEFEDE 303


>sp|O82855|NORM_VIBPA Multidrug resistance protein norM OS=Vibrio
           parahaemolyticus GN=norM PE=1 SV=2
          Length = 456

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = +2

Query: 149 ACTIFVITISQLGVSIFIHCLWQSSSRILESIASVMSSLFRPCILFGIGLL 301
           A  + + +++Q G+      +    S    +  SV SS++ P ILFGIGLL
Sbjct: 15  ATPVLIASVAQTGMGFVDTVMAGGVSATDMAAVSVASSIWLPSILFGIGLL 65
tr_hit_id Q4RGL6
Definition tr|Q4RGL6|Q4RGL6_TETNG Chromosome undetermined SCAF15097, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis
Align length 128
Score (bit) 40.4
E-value 0.054
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915353|Adiantum capillus-veneris mRNA, clone:
YMU001_000070_E07.
         (523 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q4RGL6|Q4RGL6_TETNG Chromosome undetermined SCAF15097, whole ...    40   0.054
tr|Q8I2V4|Q8I2V4_PLAF7 Putative uncharacterized protein PFI0975c...    35   1.7  
tr|Q5AGN3|Q5AGN3_CANAL Putative uncharacterized protein OS=Candi...    35   3.0  
tr|B4JN61|B4JN61_DROGR GH24196 OS=Drosophila grimshawi GN=GH2419...    34   3.9  
tr|B4I933|B4I933_DROSE GM19074 OS=Drosophila sechellia GN=GM1907...    34   3.9  
tr|B3P977|B3P977_DROER GG12794 OS=Drosophila erecta GN=GG12794 P...    34   3.9  
tr|Q7SG44|Q7SG44_NEUCR Putative uncharacterized protein OS=Neuro...    34   3.9  
tr|Q5AG97|Q5AG97_CANAL Putative uncharacterized protein OS=Candi...    34   3.9  
tr|A6C8K4|A6C8K4_9PLAN Putative uncharacterized protein OS=Planc...    34   5.1  
tr|B4PX09|B4PX09_DROYA GE16620 (Fragment) OS=Drosophila yakuba G...    34   5.1  
tr|Q95BH1|Q95BH1_9POAL DNA-directed RNA polymerase beta' subunit...    33   6.6  
tr|B8B8C2|B8B8C2_ORYSI Putative uncharacterized protein OS=Oryza...    33   6.6  
tr|A3BM15|A3BM15_ORYSJ Putative uncharacterized protein OS=Oryza...    33   6.6  
tr|B4M2J5|B4M2J5_DROVI GJ19504 OS=Drosophila virilis GN=GJ19504 ...    33   6.6  
tr|B3MYA3|B3MYA3_DROAN GF22097 OS=Drosophila ananassae GN=GF2209...    33   6.6  
tr|B0WC36|B0WC36_CULQU Ribosome biogenesis protein bop1 OS=Culex...    33   6.6  
tr|Q6Y7Y3|Q6Y7Y3_PANMI DNA-directed RNA polymerase beta' subunit...    33   8.6  
tr|B6KIR4|B6KIR4_TOXGO Putative uncharacterized protein OS=Toxop...    33   8.6  
tr|B3MIN9|B3MIN9_DROAN GF13792 OS=Drosophila ananassae GN=GF1379...    33   8.6  

>tr|Q4RGL6|Q4RGL6_TETNG Chromosome undetermined SCAF15097, whole
           genome shotgun sequence. (Fragment) OS=Tetraodon
           nigroviridis GN=GSTENG00034752001 PE=4 SV=1
          Length = 401

 Score = 40.4 bits (93), Expect = 0.054
 Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 3/128 (2%)
 Frame = -1

Query: 460 DDASYGEIEGRLINKDEDFIEEDQGAK--GIADVYSKVADGXXXXXXXXXXXX*MQESNA 287
           DD    E+E R++ ++E  +EE++G +  G  D    V                 ++ N 
Sbjct: 50  DDREEEELE-RVVVEEEGEVEEEEGEELEGYMDYNGHVVH--------EEDELEREDDNG 100

Query: 286 EEDAGSEERRHHRGNGF*DARGRLPKAVDED-ADTELAYGDDEDGTSSNFYEPGKDDNLN 110
           EED G E+    +  G      R+ +  DE+ A  E+ Y + E+    +     KDDN N
Sbjct: 101 EEDDGEEDIEVEQEEGEESEEERVEEVDDEEEAVEEVKYDEGEEEEGGHSQRQEKDDNNN 160

Query: 109 DEFAFFGE 86
           DE+  + E
Sbjct: 161 DEYDNYDE 168


>tr|Q8I2V4|Q8I2V4_PLAF7 Putative uncharacterized protein PFI0975c
            OS=Plasmodium falciparum (isolate 3D7) GN=PFI0975c PE=4
            SV=1
          Length = 3381

 Score = 35.4 bits (80), Expect = 1.7
 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = -1

Query: 301  QESNAEEDAGSEERRHHRGNGF*DARGRLPKAVDEDADTELAYGDDEDGTSSNFY-EPGK 125
            ++ + +ED   E+  HH  +   D +  +   V+ D DT   Y D+E   S+NFY E   
Sbjct: 885  EDDDDDEDDDDEDDDHHHDDNNDDNKYHI---VNYDDDTNNEYEDEESFLSTNFYGEKNN 941

Query: 124  DDNLN 110
             DN+N
Sbjct: 942  SDNIN 946


>tr|Q5AGN3|Q5AGN3_CANAL Putative uncharacterized protein OS=Candida
           albicans GN=CaO19.11758 PE=4 SV=1
          Length = 306

 Score = 34.7 bits (78), Expect = 3.0
 Identities = 19/77 (24%), Positives = 31/77 (40%)
 Frame = -1

Query: 301 QESNAEEDAGSEERRHHRGNGF*DARGRLPKAVDEDADTELAYGDDEDGTSSNFYEPGKD 122
           +  +  +D   +E  HH  +G     G+ P     + D +    DD+D  + N +     
Sbjct: 70  ENDSDNDDEDDDETEHHHLDGLYSLMGKRPHDSSSNGDDD--DDDDDDNNNKNIFSSTSS 127

Query: 121 DNLNDEFAFFGE*TDSD 71
           D  +DE  F     DSD
Sbjct: 128 DGDSDEAMFSSSDDDSD 144


>tr|B4JN61|B4JN61_DROGR GH24196 OS=Drosophila grimshawi GN=GH24196
           PE=4 SV=1
          Length = 915

 Score = 34.3 bits (77), Expect = 3.9
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -1

Query: 217 LPKAVDEDADTELAYGDDEDGTSSNFYEPGKDDNLNDE 104
           +P A    A+ EL+  DD+D   SN+ +   DD L+DE
Sbjct: 216 MPPAQLNSANEELSSNDDDDSNDSNYSKDANDDELDDE 253


>tr|B4I933|B4I933_DROSE GM19074 OS=Drosophila sechellia GN=GM19074
           PE=4 SV=1
          Length = 864

 Score = 34.3 bits (77), Expect = 3.9
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -1

Query: 217 LPKAVDEDADTELAYGDDEDGTSSNFYEPGKDDNLNDEFAFFGE*TDSD 71
           +P A    A+ EL   D++D   SN+ +   +D+L+DE    G+  + D
Sbjct: 217 MPAAQINSANDELVMNDEDDSNDSNYSKDANEDDLDDEDDLIGDDEEDD 265


>tr|B3P977|B3P977_DROER GG12794 OS=Drosophila erecta GN=GG12794 PE=4
           SV=1
          Length = 894

 Score = 34.3 bits (77), Expect = 3.9
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -1

Query: 217 LPKAVDEDADTELAYGDDEDGTSSNFYEPGKDDNLNDEFAFFGE*TDSD 71
           +P A    A+ EL   D++D   SN+ +   +D+L+DE    G+  + D
Sbjct: 217 MPAAQINSANDELVMNDEDDSNDSNYSKDANEDDLDDEDDLMGDDEEDD 265


>tr|Q7SG44|Q7SG44_NEUCR Putative uncharacterized protein OS=Neurospora
            crassa GN=NCU07498 PE=4 SV=1
          Length = 1269

 Score = 34.3 bits (77), Expect = 3.9
 Identities = 15/45 (33%), Positives = 27/45 (60%)
 Frame = -1

Query: 292  NAEEDAGSEERRHHRGNGF*DARGRLPKAVDEDADTELAYGDDED 158
            N EE+ G+++R+  +G G    +G+   AV+E+ + E   G+ ED
Sbjct: 1187 NGEEEGGNKKRKRGKGKGKGKGKGKKAAAVEEEEEQEDVDGEKED 1231


>tr|Q5AG97|Q5AG97_CANAL Putative uncharacterized protein OS=Candida
           albicans GN=CaO19.4282 PE=4 SV=1
          Length = 302

 Score = 34.3 bits (77), Expect = 3.9
 Identities = 19/77 (24%), Positives = 31/77 (40%)
 Frame = -1

Query: 301 QESNAEEDAGSEERRHHRGNGF*DARGRLPKAVDEDADTELAYGDDEDGTSSNFYEPGKD 122
           +  +  +D   +E  HH  +G     G+ P     + D +    DD+D  + N +     
Sbjct: 66  ENDSDNDDEDDDETEHHHLDGLYSLMGKRPHDSSSNGDDD--DDDDDDNDNKNIFSSTSS 123

Query: 121 DNLNDEFAFFGE*TDSD 71
           D  +DE  F     DSD
Sbjct: 124 DGDSDEAMFSSSDDDSD 140


>tr|A6C8K4|A6C8K4_9PLAN Putative uncharacterized protein
           OS=Planctomyces maris DSM 8797 GN=PM8797T_30132 PE=4
           SV=1
          Length = 100

 Score = 33.9 bits (76), Expect = 5.1
 Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
 Frame = +2

Query: 185 GVSIFIHCLWQSSSRILESIASVMSSLFRPCILFG-IGLLHL---HSRFGFFYMLNFTIR 352
           G+ + + CLW + SR L      + +++   I+FG  GL++L   +  FG +    F++ 
Sbjct: 4   GIFLVLLCLWATGSRCLSQFGLKVGTVYLTGIVFGCFGLIYLVGVYYNFGLYNTNRFSLT 63

Query: 353 HF*IYICNPLRTLVLFNKILIL 418
            F +Y+   +   V+   + +L
Sbjct: 64  VFSMYLLAAVIVSVILVNLSVL 85


>tr|B4PX09|B4PX09_DROYA GE16620 (Fragment) OS=Drosophila yakuba
           GN=GE16620 PE=4 SV=1
          Length = 840

 Score = 33.9 bits (76), Expect = 5.1
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -1

Query: 217 LPKAVDEDADTELAYGDDEDGTSSNFYEPGKDDNLNDEFAFFGE*TDSD 71
           +P A    A+ EL   D++D   SN+ +   +D+L+DE    G+  + D
Sbjct: 146 MPAAQINTANDELVMNDEDDSNDSNYSKDANEDDLDDEDDLMGDDEEDD 194