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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915306
Clone id YMU001_000070_A04
Library
Length 433
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000070_A04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GTGCTGTGCAAAATGTCCCCAATGTAGGAAGCCAAGAAAAGAAATGATATCATTTCAATA
TACCTCCTTTATAGATCAATTGCAATTGATATGTGGCAGTGAGTCATTTTGCCATGATTT
TCTCGCCGTGTGGAGAGAGAGCGCACAGTGGCTTGGAAGAGAAACATGTGACTATCCATC
ACATATTAATGAGTTCTGGGATGGGGAAAAGGCAAGAATGTACCAAGATTTTTGGAATCC
AGATGTGCATTGGGAGGCGCCGGTGATTTGCAATAATGAATGTTGCAAACACTCGTACAA
TGCTTTTCCAGAAGACTTAAGAAGTCCTGAGCTACTATCAGGATGGAGAGAGAATCTCCA
AGAGTATCGATTCAAATGCTCAAAGTGTTTTAAGGATATTCATTCTCAACGAAGAATGAT
ATAGGTACATTTT
■■Homology search results ■■ -
sp_hit_id Q00681
Definition sp|Q00681|STCJ_EMENI Putative sterigmatocystin biosynthesis fatty acid synthase subunit alpha OS=Emericella nidulans
Align length 43
Score (bit) 32.0
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915306|Adiantum capillus-veneris mRNA, clone:
YMU001_000070_A04.
         (433 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q00681|STCJ_EMENI Putative sterigmatocystin biosynthesis fatt...    32   1.1  
sp|Q899C3|SYI_CLOTE Isoleucyl-tRNA synthetase OS=Clostridium tet...    30   3.3  
sp|P38211|GPI18_YEAST GPI mannosyltransferase 2 OS=Saccharomyces...    30   3.3  
sp|P32359|TREA_TENMO Trehalase OS=Tenebrio molitor PE=2 SV=1           30   5.6  
sp|Q1IEF7|RF3_PSEE4 Peptide chain release factor 3 OS=Pseudomona...    29   9.6  
sp|Q9N2H0|CY24A_TURTR Cytochrome b-245 light chain OS=Tursiops t...    29   9.6  

>sp|Q00681|STCJ_EMENI Putative sterigmatocystin biosynthesis fatty
           acid synthase subunit alpha OS=Emericella nidulans
           GN=stcJ PE=3 SV=1
          Length = 1559

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +2

Query: 149 WLGRETCDYPSHINEFWDGEKARMYQDFWNPDVHWEAPVICNN 277
           W    + D+ S I+  +D  K R Y+D+WN     E   IC N
Sbjct: 292 WTAEFSDDFLSQISRRFDARKTRWYRDWWN-SARQELLTICQN 333


>sp|Q899C3|SYI_CLOTE Isoleucyl-tRNA synthetase OS=Clostridium tetani
           GN=ileS PE=3 SV=2
          Length = 1036

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 31/146 (21%), Positives = 58/146 (39%), Gaps = 28/146 (19%)
 Frame = +2

Query: 68  FIDQLQLICGSESFCHDFLAVWR--------ESAQWLGRETC------DYPSHINEFWDG 205
           ++D+  ++  SE F H +   WR         +  W  R T       +  + +N + D 
Sbjct: 369 YMDEKGILYKSEKFTHSYPHCWRCDTALLYYPTDSWFVRMTSLRDKLLENNNKVNWYPDN 428

Query: 206 EKARMYQDF------W--NPDVHWEAPVI-----CNNECCKHSYNAFPED-LRSPELLSG 343
            +   +  F      W  + D +W  P+      C +  C  S +   E  +  PE +  
Sbjct: 429 IRTGRFGKFLENVIDWGISRDRYWGTPLPIWECECGHRECIGSISELKEKGIDVPEDIEL 488

Query: 344 WRENLQEYRFKCSKCFKDIHSQRRMI 421
            +  + + + KCSKC K++   R +I
Sbjct: 489 HKPYIDKVKLKCSKCGKEMKRTREVI 514


>sp|P38211|GPI18_YEAST GPI mannosyltransferase 2 OS=Saccharomyces
           cerevisiae GN=GPI18 PE=1 SV=1
          Length = 433

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 17/65 (26%), Positives = 26/65 (40%)
 Frame = +2

Query: 140 SAQWLGRETCDYPSHINEFWDGEKARMYQDFWNPDVHWEAPVICNNECCKHSYNAFPEDL 319
           S   L  E C  PS IN +W+       + FWN  + W++     N   K+    F  + 
Sbjct: 31  STSLLLNELCSSPSEINSYWN-------KYFWNKLLSWDSVFFIKNITSKNGKPQFEHEY 83

Query: 320 RSPEL 334
              +L
Sbjct: 84  AFSQL 88


>sp|P32359|TREA_TENMO Trehalase OS=Tenebrio molitor PE=2 SV=1
          Length = 555

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
 Frame = +2

Query: 29  KPRKEMISFQYTSFIDQLQLICGSES-----FCHDFLAVWRESAQWLGRETCDYPSH 184
           K   E  S+  T F D   L+   E      F  D + +W   A+ + +E  DYP H
Sbjct: 92  KQENEFESWTPTDFTDNPTLLSRIEDKTIRQFAQDLVKIWPTLARKVKKEVLDYPEH 148


>sp|Q1IEF7|RF3_PSEE4 Peptide chain release factor 3 OS=Pseudomonas
           entomophila (strain L48) GN=prfC PE=3 SV=1
          Length = 527

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +2

Query: 56  QYTSFIDQLQLICGSESFCHDF 121
           QY SF+DQL+L+ G+   CH+F
Sbjct: 220 QYDSFVDQLELVQGA---CHEF 238


>sp|Q9N2H0|CY24A_TURTR Cytochrome b-245 light chain OS=Tursiops
           truncatus GN=CYBA PE=2 SV=3
          Length = 192

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -2

Query: 294 ECLQHSLLQITGASQCTSGFQKSWYILAFSPSQNSLIC 181
           + L   L+ ITG    T+G    WY+ A+S +   LIC
Sbjct: 13  QALASGLILITGGIVATAGQFAQWYLGAYSIAAGVLIC 50
tr_hit_id A7S850
Definition tr|A7S850|A7S850_NEMVE Predicted protein OS=Nematostella vectensis
Align length 130
Score (bit) 54.3
E-value 3.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915306|Adiantum capillus-veneris mRNA, clone:
YMU001_000070_A04.
         (433 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7S850|A7S850_NEMVE Predicted protein OS=Nematostella vectens...    54   3e-06
tr|A7SY70|A7SY70_NEMVE Predicted protein OS=Nematostella vectens...    50   6e-05
tr|A7SPB0|A7SPB0_NEMVE Predicted protein OS=Nematostella vectens...    50   6e-05
tr|A7SNZ4|A7SNZ4_NEMVE Predicted protein OS=Nematostella vectens...    49   1e-04
tr|A7QQU3|A7QQU3_VITVI Chromosome undetermined scaffold_144, who...    35   1.4  
tr|B7G4I4|B7G4I4_PHATR Predicted protein (Fragment) OS=Phaeodact...    34   4.2  
tr|Q4UFU5|Q4UFU5_THEAN Ribosomal protein l7/l12, mitochondrial/a...    33   7.1  
tr|B3KZY2|B3KZY2_PLAKH Ag-1 blood stage membrane protein homolog...    33   9.3  
tr|B8GGD5|B8GGD5_9EURY 4Fe-4S ferredoxin iron-sulfur binding dom...    33   9.3  

>tr|A7S850|A7S850_NEMVE Predicted protein OS=Nematostella vectensis
           GN=v1g208262 PE=4 SV=1
          Length = 868

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 39/130 (30%), Positives = 55/130 (42%), Gaps = 4/130 (3%)
 Frame = +2

Query: 14  CPQCRKPRKEMISFQYTSFIDQLQLICGSESFCHDFLAVWRESAQWLGRETCDYPSHINE 193
           CP C K     I + Y    ++L+    + + C   L+ W+E   WL R T  +P    E
Sbjct: 78  CPNCGKCG--YIKYYYLGLHEKLKNWFRNLNMCRKMLSHWQEREHWLKRNT-SWPLK-KE 133

Query: 194 FWDGEKARMYQDFWNPDVHWEAPVICNNEC----CKHSYNAFPEDLRSPELLSGWRENLQ 361
            WDGE+    Q FW+PD  W  P  C  EC         N+ P+D+    LL        
Sbjct: 134 VWDGERWLEVQWFWDPDQLWTVPTRC-GECLTVISSDLINSSPKDIDGLSLL-------- 184

Query: 362 EYRFKCSKCF 391
               +C +CF
Sbjct: 185 ----ECPECF 190


>tr|A7SY70|A7SY70_NEMVE Predicted protein OS=Nematostella vectensis
           GN=v1g219377 PE=4 SV=1
          Length = 399

 Score = 50.1 bits (118), Expect = 6e-05
 Identities = 27/88 (30%), Positives = 42/88 (47%)
 Frame = +2

Query: 14  CPQCRKPRKEMISFQYTSFIDQLQLICGSESFCHDFLAVWRESAQWLGRETCDYPSHINE 193
           C  C    K +I++ Y    ++++     E+ C+  L+ W E   WLG E   +P    E
Sbjct: 8   CSNCGN--KGVIAYYYLGLQNKVKNWFRDENMCNKMLSHWNEREHWLGVEQ-SWPIK-KE 63

Query: 194 FWDGEKARMYQDFWNPDVHWEAPVICNN 277
            WDGE+    Q FW+P+  W  P  C +
Sbjct: 64  MWDGERWNELQWFWDPNKTWVIPCRCEH 91


>tr|A7SPB0|A7SPB0_NEMVE Predicted protein OS=Nematostella vectensis
           GN=v1g246549 PE=4 SV=1
          Length = 645

 Score = 50.1 bits (118), Expect = 6e-05
 Identities = 27/88 (30%), Positives = 42/88 (47%)
 Frame = +2

Query: 14  CPQCRKPRKEMISFQYTSFIDQLQLICGSESFCHDFLAVWRESAQWLGRETCDYPSHINE 193
           C  C    K +I++ Y    ++++     E+ C+  L+ W E   WLG E   +P    E
Sbjct: 8   CSNCGN--KGVIAYYYLGLQNKVKNWFRDENMCNKMLSHWNEREHWLGVEQ-SWPIK-KE 63

Query: 194 FWDGEKARMYQDFWNPDVHWEAPVICNN 277
            WDGE+    Q FW+P+  W  P  C +
Sbjct: 64  MWDGERWNELQWFWDPNKTWVIPCRCEH 91


>tr|A7SNZ4|A7SNZ4_NEMVE Predicted protein OS=Nematostella vectensis
           GN=v1g246481 PE=4 SV=1
          Length = 501

 Score = 48.9 bits (115), Expect = 1e-04
 Identities = 28/83 (33%), Positives = 39/83 (46%)
 Frame = +2

Query: 14  CPQCRKPRKEMISFQYTSFIDQLQLICGSESFCHDFLAVWRESAQWLGRETCDYPSHINE 193
           CP C K     I + Y    ++L+    + + C   L+ W+E   WL R T  +P    E
Sbjct: 226 CPNCGKCG--YIKYYYLGLHEKLKNWFRNLNMCRKMLSHWQEREHWLKRNT-SWPLK-KE 281

Query: 194 FWDGEKARMYQDFWNPDVHWEAP 262
            WDGE+    Q FW+PD  W  P
Sbjct: 282 VWDGERWLEVQWFWDPDQLWTVP 304


>tr|A7QQU3|A7QQU3_VITVI Chromosome undetermined scaffold_144, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00003507001 PE=4 SV=1
          Length = 283

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = -3

Query: 239 DSKNLGTFLPFPHPRTH*YVMDSHMFL-FQATVRSLSTRRENHGKMTHCHISIA 81
           D  NL TF   P P     + DS++F      + ++  +RE  G+M HC +SIA
Sbjct: 175 DGLNLYTFSKMPLPERVMEIADSNLFRESDEAISNVGNQRETEGRMCHCLVSIA 228


>tr|B7G4I4|B7G4I4_PHATR Predicted protein (Fragment)
           OS=Phaeodactylum tricornutum CCAP 1055/1
           GN=PHATRDRAFT_1745 PE=4 SV=1
          Length = 371

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +2

Query: 137 ESAQWLGRETCDYPSHINEFWDGEKARMYQDFWNPDVHWEAPVIC 271
           ES   + +E C +PS    F++G   +   D WN D H  AP++C
Sbjct: 2   ESFGRITKEICRFPS----FFNGPLYQRILDLWNADHHTHAPILC 42


>tr|Q4UFU5|Q4UFU5_THEAN Ribosomal protein l7/l12,
           mitochondrial/apicoplast, putative OS=Theileria annulata
           GN=TA15030 PE=4 SV=1
          Length = 200

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = -3

Query: 368 DTLGDSLSILIVAQDFLSLLEKHCTSVCNIHYCKSPAPPNAHLDSKNLGTFLPFPHPRT 192
           +T   SL ++ +  + L+L       +CN+   K        L +KN+G  LPFPHP +
Sbjct: 42  ETRKPSLKVIKLVDEILNLTLIEVADLCNLCQDK--------LSTKNIGNRLPFPHPNS 92


>tr|B3KZY2|B3KZY2_PLAKH Ag-1 blood stage membrane protein
           homologue,putative OS=Plasmodium knowlesi (strain H)
           GN=PKH_030940 PE=4 SV=1
          Length = 508

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 32/135 (23%), Positives = 55/135 (40%), Gaps = 10/135 (7%)
 Frame = +2

Query: 23  CRKPRKEMISFQYTSFIDQLQLICGSES-FCHDFLAVWRESAQWLGRETCDYPSHINEFW 199
           C K  +E+   Q  SF    +  C +E  F  D L +W+  ++   ++  D  +   EF+
Sbjct: 156 CFKDGQEICKVQM-SFYKIQKYACPNECMFIQDGLEIWKNKSKSPRKKNIDLQNIHKEFY 214

Query: 200 DGEKARMYQDFWNPDVH--------WEAPVICNNECCKHSYNAF-PEDLRSPELLSGWRE 352
           D EK     D  + D++             +   E C   + A+ P+ + + E++  W  
Sbjct: 215 DDEKNLSLIDV-DTDINDISLMQKLMLMSFVLEQEICVFDFYAYVPKYMSAKEIMGEW-- 271

Query: 353 NLQEYRFKCSKCFKD 397
                 F C  CFKD
Sbjct: 272 ------FLCFLCFKD 280


>tr|B8GGD5|B8GGD5_9EURY 4Fe-4S ferredoxin iron-sulfur binding domain
           protein OS=Candidatus Methanosphaerula palustris E1-9c
           GN=Mpal_0828 PE=4 SV=1
          Length = 836

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
 Frame = +2

Query: 113 HDFLAVWRESAQ----WLGRETCDYPSHINEFWDGEKARMYQDFWNPDVHWEAPVICNNE 280
           H  L +WRES++    W G  T   P ++           +  F    +HWE+P+IC N+
Sbjct: 626 HRSLCIWRESSRRWHMWGGGGTKTPPYNL-----------FYRFSEDGIHWESPIICLND 674