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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915250
Clone id YMU001_000069_C10
Library
Length 201
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000069_C10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TACTTGGGTGATCCCACAAGCCCAGATCCTTTATGATGTCACTGATACCTATCCGAAAAG
TTGTAACCTGCAATTCATAGTCAGGGCTCTTAACTCTTCTAGGCTCATGGAAATATGATC
CACTGAACTCGGCGCATGTGACCGGAGTCTTCTCGTTGGCATCAGGTAAGTTGATGAAGA
TGCGAAATGCTGATGCCTTGC
■■Homology search results ■■ -
sp_hit_id Q08296
Definition sp|Q08296|PPOF_SOLLC Polyphenol oxidase F, chloroplastic OS=Solanum lycopersicum
Align length 59
Score (bit) 37.0
E-value 0.031
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915250|Adiantum capillus-veneris mRNA, clone:
YMU001_000069_C10.
         (201 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q08296|PPOF_SOLLC Polyphenol oxidase F, chloroplastic OS=Sola...    37   0.031
sp|Q08307|PPOE_SOLLC Polyphenol oxidase E, chloroplastic OS=Sola...    36   0.069
sp|Q06215|PPO_VICFA Polyphenol oxidase A1, chloroplastic OS=Vici...    35   0.090
sp|Q08305|PPOC_SOLLC Polyphenol oxidase C, chloroplastic OS=Sola...    35   0.12 
sp|Q08303|PPOA_SOLLC Polyphenol oxidase A, chloroplastic OS=Sola...    35   0.12 
sp|Q06355|PPOB_SOLTU Catechol oxidase B, chloroplastic (Fragment...    33   0.45 
sp|Q08304|PPOB_SOLLC Polyphenol oxidase B, chloroplastic OS=Sola...    33   0.58 
sp|Q08306|PPOD_SOLLC Polyphenol oxidase D, chloroplastic OS=Sola...    32   0.99 
sp|Q9C5W1|OPRL2_ARATH Putative 12-oxophytodienoate reductase-lik...    30   4.9  

>sp|Q08296|PPOF_SOLLC Polyphenol oxidase F, chloroplastic OS=Solanum
           lycopersicum PE=3 SV=1
          Length = 585

 Score = 37.0 bits (84), Expect = 0.031
 Identities = 18/59 (30%), Positives = 33/59 (55%)
 Frame = -3

Query: 187 FRIFINLPDANEKTPVTCAEFSGSYFHEPRRVKSPDYELQVTTFRIGISDIIKDLGLWD 11
           F +F+N+        +  AEF+GSY   P    + D  ++  TF + I+++++D+GL D
Sbjct: 498 FDVFLNVDKTVNAEELDKAEFAGSYTSLPHVHGNNDNHVKDVTFTLAITELLEDIGLED 556


>sp|Q08307|PPOE_SOLLC Polyphenol oxidase E, chloroplastic OS=Solanum
           lycopersicum PE=3 SV=1
          Length = 587

 Score = 35.8 bits (81), Expect = 0.069
 Identities = 18/59 (30%), Positives = 32/59 (54%)
 Frame = -3

Query: 187 FRIFINLPDANEKTPVTCAEFSGSYFHEPRRVKSPDYELQVTTFRIGISDIIKDLGLWD 11
           F +F+N+        +  AEF+GSY   P    S    +   TF++ I+++++D+GL D
Sbjct: 500 FDVFLNVDKTVNADELDKAEFAGSYTSLPHVHGSNTNHVTSLTFKLAITELLEDIGLED 558


>sp|Q06215|PPO_VICFA Polyphenol oxidase A1, chloroplastic OS=Vicia
           faba PE=1 SV=1
          Length = 606

 Score = 35.4 bits (80), Expect = 0.090
 Identities = 18/58 (31%), Positives = 33/58 (56%)
 Frame = -3

Query: 196 ASAFRIFINLPDANEKTPVTCAEFSGSYFHEPRRVKSPDYELQVTTFRIGISDIIKDL 23
           A  F ++IN  D ++K      EF+GS+ + P        +  +T+ R+GI+D+++DL
Sbjct: 519 AIKFDVYIN--DEDDKVGAGNTEFAGSFVNIPHSAHGHKNKKIITSLRLGITDLLEDL 574


>sp|Q08305|PPOC_SOLLC Polyphenol oxidase C, chloroplastic OS=Solanum
           lycopersicum PE=3 SV=1
          Length = 626

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
 Frame = -3

Query: 187 FRIFINLPDANEKTPVTCAEFSGSYFHEP--RRVKSPDYELQVTTFRIGISDIIKDLGLW 14
           F +F+N+ +      +  AEF+GSY   P   RV  P +     T R+ I+++++D+GL 
Sbjct: 503 FDVFLNVDNNVNANELDKAEFAGSYTSLPHVHRVGDPKH-TATATLRLAITELLEDIGLE 561

Query: 13  D 11
           D
Sbjct: 562 D 562


>sp|Q08303|PPOA_SOLLC Polyphenol oxidase A, chloroplastic OS=Solanum
           lycopersicum PE=3 SV=2
          Length = 630

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
 Frame = -3

Query: 187 FRIFINLPDANEKTPVTCAEFSGSYFHEP--RRVKSPDYELQVTTFRIGISDIIKDLGLW 14
           F +F+N+ +      +  AEF+GSY   P   RV  P +     T R+ I+++++D+GL 
Sbjct: 507 FDVFLNVDNNVNANELDKAEFAGSYTSLPHVHRVGDPKH-TATATLRLAITELLEDIGLE 565

Query: 13  D 11
           D
Sbjct: 566 D 566


>sp|Q06355|PPOB_SOLTU Catechol oxidase B, chloroplastic (Fragment)
           OS=Solanum tuberosum PE=2 SV=1
          Length = 588

 Score = 33.1 bits (74), Expect = 0.45
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = -3

Query: 187 FRIFINLPDANEKTPVTCAEFSGSYFHEPRRVKSPDYELQVTTFRIGISDIIKDLGLWD 11
           F +F+N+        +  AEF+GSY   P    +    +   TF++ I+++++D GL D
Sbjct: 501 FDVFLNVDKTVNADELDKAEFAGSYTSLPHVHGNNTNHVTSVTFKLAITELLEDNGLED 559


>sp|Q08304|PPOB_SOLLC Polyphenol oxidase B, chloroplastic OS=Solanum
           lycopersicum PE=3 SV=1
          Length = 596

 Score = 32.7 bits (73), Expect = 0.58
 Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
 Frame = -3

Query: 187 FRIFINLPDANEKTPVTCAEFSGSYFHEP--RRVKSPDYELQVTTFRIGISDIIKDLGLW 14
           F +F+N+ +      +  AEF+GSY   P   R    D+  +V  F++ I+++++D+GL 
Sbjct: 508 FDVFLNVDNNVNANELDKAEFAGSYTSLPHVHRAGENDHIAKV-NFQLAITELLEDIGLE 566

Query: 13  D 11
           D
Sbjct: 567 D 567


>sp|Q08306|PPOD_SOLLC Polyphenol oxidase D, chloroplastic OS=Solanum
           lycopersicum PE=3 SV=2
          Length = 591

 Score = 32.0 bits (71), Expect = 0.99
 Identities = 16/60 (26%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
 Frame = -3

Query: 187 FRIFINLPDANEKTPVTCAEFSGSYFHEPRRVKSPD-YELQVTTFRIGISDIIKDLGLWD 11
           F +F+N+ +      +  AEF+GSY   P   ++ +   +    F++ I+++++D+GL D
Sbjct: 503 FDVFLNVDNNVNANELDKAEFAGSYTSLPHVHRAGETNHIATVDFQLAITELLEDIGLED 562


>sp|Q9C5W1|OPRL2_ARATH Putative 12-oxophytodienoate reductase-like
           protein 2 OS=Arabidopsis thaliana GN=At1g17990 PE=2 SV=1
          Length = 269

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = -3

Query: 166 PDANEKTPVTCAEFSGSYFHEPRRVKSPDYELQVTTFRIGISDIIK 29
           P ++   P+ C    G  F  PRR++S +    V  FRI   + I+
Sbjct: 121 PVSSTDKPLMCKNMYGGQFKPPRRLRSDELPAIVNDFRIAARNAIE 166
tr_hit_id Q9AU62
Definition tr|Q9AU62|Q9AU62_ANACO Polyphenol oxidase (Fragment) OS=Ananas comosus
Align length 67
Score (bit) 42.4
E-value 0.012
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915250|Adiantum capillus-veneris mRNA, clone:
YMU001_000069_C10.
         (201 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9AU62|Q9AU62_ANACO Polyphenol oxidase (Fragment) OS=Ananas c...    42   0.012
tr|Q6YHK5|Q6YHK5_ANACO Polyphenol oxidase OS=Ananas comosus GN=P...    42   0.012
tr|Q9AU63|Q9AU63_ANACO Polyphenol oxidase OS=Ananas comosus GN=P...    37   0.49 
tr|Q6YHK7|Q6YHK7_ANACO Polyphenol oxidase (Fragment) OS=Ananas c...    37   0.49 
tr|Q41428|Q41428_SOLTU Polyphenol oxidase OS=Solanum tuberosum G...    36   0.84 
tr|Q5G1L4|Q5G1L4_9ROSA Polyphenol oxidase OS=Prunus salicina var...    35   1.4  
tr|A2Q4Q3|A2Q4Q3_MEDTR Tyrosinase OS=Medicago truncatula GN=MtrD...    35   1.4  
tr|Q7Y249|Q7Y249_MEDSA Polyphenol oxidase OS=Medicago sativa GN=...    35   1.9  
tr|Q6ZYB4|Q6ZYB4_SOLLC Polyphenol oxidase A (Fragment) OS=Solanu...    35   1.9  
tr|Q6ZXV2|Q6ZXV2_SOLLC Polyphenol oxidase (Fragment) OS=Solanum ...    35   1.9  
tr|O81103|O81103_PRUAR Polyphenol oxidase OS=Prunus armeniaca PE...    35   1.9  
tr|B3WFP2|B3WFP2_TAROF Polyphenol oxidase OS=Taraxacum officinal...    34   4.1  
tr|B2BX66|B2BX66_TAROF Chloroplast polyphenol oxidase OS=Taraxac...    34   4.1  
tr|Q41486|Q41486_SOLTU Propolyphenol oxidase (Fragment) OS=Solan...    33   5.4  

>tr|Q9AU62|Q9AU62_ANACO Polyphenol oxidase (Fragment) OS=Ananas
           comosus PE=2 SV=1
          Length = 351

 Score = 42.4 bits (98), Expect = 0.012
 Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
 Frame = -3

Query: 196 ASAFRIFINLPDANEKTPVTCAEFSGSYFHEPRRVKSPDYELQ--VTTFRIGISDIIKDL 23
           A  F ++IN PD NE      +EF+GS+   P + K    E     TT R+GI+D+++D+
Sbjct: 261 AVKFDVYINAPD-NEGVGPEASEFAGSFVQVPHKHKKGKKEKARIKTTLRLGITDLLEDI 319

Query: 22  GLWDHPS 2
           G  D  S
Sbjct: 320 GAEDDES 326


>tr|Q6YHK5|Q6YHK5_ANACO Polyphenol oxidase OS=Ananas comosus GN=PPO2
           PE=4 SV=1
          Length = 577

 Score = 42.4 bits (98), Expect = 0.012
 Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
 Frame = -3

Query: 196 ASAFRIFINLPDANEKTPVTCAEFSGSYFHEPRRVKSPDYELQ--VTTFRIGISDIIKDL 23
           A  F ++IN PD NE      +EF+GS+   P + K    E     TT R+GI+D+++D+
Sbjct: 487 AVKFDVYINAPD-NEGVGPEASEFAGSFVQVPHKHKKGKKEKARIKTTLRLGITDLLEDI 545

Query: 22  GLWDHPS 2
           G  D  S
Sbjct: 546 GAEDDES 552


>tr|Q9AU63|Q9AU63_ANACO Polyphenol oxidase OS=Ananas comosus GN=PPO1
           PE=2 SV=1
          Length = 604

 Score = 37.0 bits (84), Expect = 0.49
 Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
 Frame = -3

Query: 187 FRIFINLPDANEKTPVTCAEFSGSYFHEPRRVKSPDYELQV----TTFRIGISDIIKDLG 20
           F ++IN P+ +E      +EF+GS+ H P + K      ++    T  ++GI+D+++D+G
Sbjct: 515 FDVYINSPE-HEGVGPEASEFAGSFVHVPHKHKKAKKGKEMARMNTRLKLGITDLLEDIG 573

Query: 19  LWDHPS 2
             D  S
Sbjct: 574 AEDDES 579


>tr|Q6YHK7|Q6YHK7_ANACO Polyphenol oxidase (Fragment) OS=Ananas
           comosus GN=PPO1 PE=4 SV=1
          Length = 554

 Score = 37.0 bits (84), Expect = 0.49
 Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
 Frame = -3

Query: 187 FRIFINLPDANEKTPVTCAEFSGSYFHEPRRVKSPDYELQV----TTFRIGISDIIKDLG 20
           F ++IN P+ +E      +EF+GS+ H P + K      ++    T  ++GI+D+++D+G
Sbjct: 465 FDVYINSPE-HEGVGPEASEFAGSFVHVPHKHKKAKKGKEMARMNTRLKLGITDLLEDIG 523

Query: 19  LWDHPS 2
             D  S
Sbjct: 524 AEDDES 529


>tr|Q41428|Q41428_SOLTU Polyphenol oxidase OS=Solanum tuberosum
           GN=PPO PE=2 SV=1
          Length = 599

 Score = 36.2 bits (82), Expect = 0.84
 Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
 Frame = -3

Query: 187 FRIFINLPDANEKTPVTCAEFSGSYFHEPR--RVKSPDYELQVTTFRIGISDIIKDLGLW 14
           F +F+N+ +      +  AEF+GSY   P   RV   D+   VT F++ I+++++D+GL 
Sbjct: 511 FDVFLNVDNNVNANELDKAEFAGSYTSLPHVHRVGENDHTATVT-FQLAITELLEDIGLE 569

Query: 13  D 11
           D
Sbjct: 570 D 570


>tr|Q5G1L4|Q5G1L4_9ROSA Polyphenol oxidase OS=Prunus salicina var.
           cordata PE=2 SV=2
          Length = 597

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
 Frame = -3

Query: 199 KASAFRIFINLPDANEKTPVTCAEFSGSYFHEPR-RVKSPDYELQVTTFRIGISDIIKDL 23
           +A  F +FIN  DA   +    +EF+GS+ H P+ + K    +   T  ++GI+D+++DL
Sbjct: 510 EAVKFDVFIN-DDAESLSRRDKSEFAGSFVHVPQGKTKKAKTK---TNLKLGITDLLEDL 565

Query: 22  GLWDHPS 2
           G  D  S
Sbjct: 566 GAEDDSS 572


>tr|A2Q4Q3|A2Q4Q3_MEDTR Tyrosinase OS=Medicago truncatula
           GN=MtrDRAFT_AC157507g12v2 PE=4 SV=1
          Length = 607

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
 Frame = -3

Query: 187 FRIFINLPDANEKTPVTCAEFSGSYFHEPRRVKSPDYELQVTT--FRIGISDIIKDLGLW 14
           F +FIN  D     PV   EF+GS+ + P    S D++ + T    R+G++D+++DLG  
Sbjct: 522 FDVFINDEDDKVIKPVN-TEFAGSFVNVPH--SSHDHKKKKTNSCLRVGLTDLLEDLGAE 578

Query: 13  DHPS 2
           D  S
Sbjct: 579 DDDS 582


>tr|Q7Y249|Q7Y249_MEDSA Polyphenol oxidase OS=Medicago sativa GN=PPO
           PE=4 SV=1
          Length = 607

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
 Frame = -3

Query: 187 FRIFINLPDANEKTPVTCAEFSGSYFHEPRRVKSPDYELQVTT--FRIGISDIIKDLGLW 14
           F +FIN  D     P+   EF+GS+ + P    S D++ + T    R+G++D+++DLG  
Sbjct: 522 FDVFINDEDDKVIKPIN-TEFAGSFVNVPH--SSHDHKKKKTNSCLRVGLTDLLEDLGAE 578

Query: 13  DHPS 2
           D  S
Sbjct: 579 DDDS 582


>tr|Q6ZYB4|Q6ZYB4_SOLLC Polyphenol oxidase A (Fragment) OS=Solanum
           lycopersicum GN=ppo PE=2 SV=1
          Length = 242

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
 Frame = -3

Query: 187 FRIFINLPDANEKTPVTCAEFSGSYFHEP--RRVKSPDYELQVTTFRIGISDIIKDLGLW 14
           F +F+N+ +      +  AEF+GSY   P   RV  P +     T R+ I+++++D+GL 
Sbjct: 119 FDVFLNVDNNVNANELDKAEFAGSYTSLPHVHRVGDPKH-TATATLRLAITELLEDIGLE 177

Query: 13  D 11
           D
Sbjct: 178 D 178


>tr|Q6ZXV2|Q6ZXV2_SOLLC Polyphenol oxidase (Fragment) OS=Solanum
           lycopersicum GN=ppo PE=4 SV=1
          Length = 182

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
 Frame = -3

Query: 187 FRIFINLPDANEKTPVTCAEFSGSYFHEP--RRVKSPDYELQVTTFRIGISDIIKDLGLW 14
           F +F+N+ +      +  AEF+GSY   P   RV  P +     T R+ I+++++D+GL 
Sbjct: 119 FDVFLNVDNNVNANELDKAEFAGSYTSLPHVHRVGDPKH-TATATLRLAITELLEDIGLE 177

Query: 13  D 11
           D
Sbjct: 178 D 178